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The map label for this gene is piv [H]

Identifier: 85859004

GI number: 85859004

Start: 1184799

End: 1185383

Strand: Direct

Name: piv [H]

Synonym: SYN_00113

Alternate gene names: 85859004

Gene position: 1184799-1185383 (Clockwise)

Preceding gene: 85859003

Following gene: 85859005

Centisome position: 37.27

GC content: 47.52

Gene sequence:

>585_bases
ATGTGCTTTATTATGTCTTTATCGGCTGTTCTTGGGATAGATCTGGCGAAGCAGAAATTTGATGCTGCCCTTCTTGTCGA
TGGGAAGACCAAGCATAAGACCTGCAAAAATTCAGGGGAAGGATTTGAGGCATTGACCCTTTGGCTTACGAAGCAGGAGG
TTGAGAAGGTCCATGTCTGTCTGGAAGCGACTGGCAGCTGTGGAGATGATTTGGCCATCTATCTTCATGAGGCCGGTCAT
ATCGTCAGTATTGTAAATCCGGCCAGAATCAAGGGGTTTGCCCAGAGTGAACTGATTCGTACAAAAACGGATAAGATGGA
TGCCGCTCTGATTGCCCGGTTCTGCCTGGCTATGAAGCCCAAGGAATGGATTCCTCCTTTACCGGAGATTAGAACCTTGA
AAGCGCTGGTCAGAAGGGTTGATAGTCTGGTCGACATGCGCAGTCAGGAGAAAAACCGGCTCAGCACATCGCATGAGTCT
GTTTCTTCTTTAATCAAAGATCATATCGCTTATCTGGATCAGGAAATTGAAAAAACTCGGAAACAAATTGCAGGGCTCAG
TCAAGATGGTGGAACCGGGCGGTGA

Upstream 100 bases:

>100_bases
GAACAGTATCAGAGACCTTCCCCAATGGGAATGAGTTTGTACTTACAAGATGGATTCGAACGAAGCGCTTTTACTGAAGG
TCATATTCATTGTTTAAGAA

Downstream 100 bases:

>100_bases
CGCCACATGATTTTGCCATGTCGTGAAACCACTTATAAACGGTGTCCGGGTGCCATTGCGGGAAAATACGGCCAATATCC
TTTTTGACAGGTTCCAGTGC

Product: IS111A/IS1328/IS1533 family transposase

Products: NA

Alternate protein names: PIVML [H]

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MCFIMSLSAVLGIDLAKQKFDAALLVDGKTKHKTCKNSGEGFEALTLWLTKQEVEKVHVCLEATGSCGDDLAIYLHEAGH
IVSIVNPARIKGFAQSELIRTKTDKMDAALIARFCLAMKPKEWIPPLPEIRTLKALVRRVDSLVDMRSQEKNRLSTSHES
VSSLIKDHIAYLDQEIEKTRKQIAGLSQDGGTGR

Sequences:

>Translated_194_residues
MCFIMSLSAVLGIDLAKQKFDAALLVDGKTKHKTCKNSGEGFEALTLWLTKQEVEKVHVCLEATGSCGDDLAIYLHEAGH
IVSIVNPARIKGFAQSELIRTKTDKMDAALIARFCLAMKPKEWIPPLPEIRTLKALVRRVDSLVDMRSQEKNRLSTSHES
VSSLIKDHIAYLDQEIEKTRKQIAGLSQDGGTGR
>Mature_194_residues
MCFIMSLSAVLGIDLAKQKFDAALLVDGKTKHKTCKNSGEGFEALTLWLTKQEVEKVHVCLEATGSCGDDLAIYLHEAGH
IVSIVNPARIKGFAQSELIRTKTDKMDAALIARFCLAMKPKEWIPPLPEIRTLKALVRRVDSLVDMRSQEKNRLSTSHES
VSSLIKDHIAYLDQEIEKTRKQIAGLSQDGGTGR

Specific function: May be the site-specific invertase required for pilin gene inversion. Moraxella can express either a Q or I pilin; the inversion of 2 kb of DNA determines which pilin is expressed [H]

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 21489; Mature: 21489

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCFIMSLSAVLGIDLAKQKFDAALLVDGKTKHKTCKNSGEGFEALTLWLTKQEVEKVHVC
CCHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LEATGSCGDDLAIYLHEAGHIVSIVNPARIKGFAQSELIRTKTDKMDAALIARFCLAMKP
HHCCCCCCCCCEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KEWIPPLPEIRTLKALVRRVDSLVDMRSQEKNRLSTSHESVSSLIKDHIAYLDQEIEKTR
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQIAGLSQDGGTGR
HHHCCCCCCCCCCC
>Mature Secondary Structure
MCFIMSLSAVLGIDLAKQKFDAALLVDGKTKHKTCKNSGEGFEALTLWLTKQEVEKVHVC
CCHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
LEATGSCGDDLAIYLHEAGHIVSIVNPARIKGFAQSELIRTKTDKMDAALIARFCLAMKP
HHCCCCCCCCCEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KEWIPPLPEIRTLKALVRRVDSLVDMRSQEKNRLSTSHESVSSLIKDHIAYLDQEIEKTR
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQIAGLSQDGGTGR
HHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2403542 [H]