Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is femX [H]

Identifier: 85858824

GI number: 85858824

Start: 1013810

End: 1014898

Strand: Direct

Name: femX [H]

Synonym: SYN_01477

Alternate gene names: 85858824

Gene position: 1013810-1014898 (Clockwise)

Preceding gene: 85858822

Following gene: 85858825

Centisome position: 31.89

GC content: 49.68

Gene sequence:

>1089_bases
TTGATACAAGTGAATGTAGACATAAAACCCAAAAAGATACACGCATTGTTTCCCACGGACATTTTTTTTCAAACTACCTA
CTGGGGGCGGGTCAAGTCCCATCTCGGCTGGAAACCCGTTGCATTTGATTTCAACTCGTCGACGGGGCTGCAGGGCGACG
TGATGGTCCTGATCAAAACCCTCAAACATGATTTTGCCGCAGCCTATGTTCCCCAAGGACCTGAATTGGGACCTGATCCG
GAGAAGTATGGCCTTTTTCTCGAATCATTGTCACAGGAACTGACCAAATACATGGATTCGACTGTGGCCTTCATCCGTTA
TGACCTTCCCTGGGTATCACCGTATGCCATTGACGCTACGGATGGACGAACCTGGCCAGGTCACCCCGCTCCGGAATTAC
GGGAATTACGCATGAATATCGGCACCCGTACCTGGCCTCTTCGGAAAGCGCCGATCGATCTGACCGTTGCCGATGCATTG
GTTATTGATCTCGTTCGCGCCGAAGAGGCCATCTTTAAAGATATTAAGCCAAAGACCAGATACAATATCCGCCTTGCACA
GAGTAAGGGAATCTCCGTGTTTAACGCTTCTGTGGAAATGCTGCCGTTGTTCTACAAACTTTATCTGCAGACGGCCAAAC
GTAATGGTTTTCTGCCGGGTTCTTACCGTCATTTTTCGGCACTCTTTTCCCCTGTTGATCACAATCCCGGATCATCTGAG
GTCCTTTTTCTCCTCGCCGCCAGGGGGCAGGACGTCTTGGCCGGGGCAATTATTGCCATTTCCGGACGACAGGCGATCTA
TCTGTACGGAGCATCTTCCAATGAACAACGCAACCAGATGGGATCTTACGCTCTGCACTGGGAGGCCATCAAGTTGGCCC
GGCAAAAGGGATGCCTGACTTATGATATGGGTTCAGTATCTCCTGTTTCAGATCCAGGTCACCCGTTTTACGGTATGTAT
CGCTTCAAAACCGGTTTTGGCGGAAAAATAGTCCATCGCAACGGCACTTGGGATTATCCTGTCAACAGGCGCGGATATAG
AGCCTTCCGCAATTATGAGACGTCGTTCAATATGACAATTCCCAAATGA

Upstream 100 bases:

>100_bases
TTTTGCCGCTTTGGTTGGTTAGGGACCGTTGTTTCGTTACGAATGATACGAGATGATAGTTGGGCCCTAAGCTTCCAGAC
AAAGTCATGATGCAGGCAGG

Downstream 100 bases:

>100_bases
CACACACGACAAGAATTAGGCACACCAGAAAAAGATATTGAATATGAGCCGCTTATCCATAATGAAGTCAGTCTGTCAGT
CCGCGCGATGCAGGCACCTG

Product: pentaglycine interpeptide bridge formation protein

Products: NA

Alternate protein names: Factor essential for expression of methicillin resistance X [H]

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MIQVNVDIKPKKIHALFPTDIFFQTTYWGRVKSHLGWKPVAFDFNSSTGLQGDVMVLIKTLKHDFAAAYVPQGPELGPDP
EKYGLFLESLSQELTKYMDSTVAFIRYDLPWVSPYAIDATDGRTWPGHPAPELRELRMNIGTRTWPLRKAPIDLTVADAL
VIDLVRAEEAIFKDIKPKTRYNIRLAQSKGISVFNASVEMLPLFYKLYLQTAKRNGFLPGSYRHFSALFSPVDHNPGSSE
VLFLLAARGQDVLAGAIIAISGRQAIYLYGASSNEQRNQMGSYALHWEAIKLARQKGCLTYDMGSVSPVSDPGHPFYGMY
RFKTGFGGKIVHRNGTWDYPVNRRGYRAFRNYETSFNMTIPK

Sequences:

>Translated_362_residues
MIQVNVDIKPKKIHALFPTDIFFQTTYWGRVKSHLGWKPVAFDFNSSTGLQGDVMVLIKTLKHDFAAAYVPQGPELGPDP
EKYGLFLESLSQELTKYMDSTVAFIRYDLPWVSPYAIDATDGRTWPGHPAPELRELRMNIGTRTWPLRKAPIDLTVADAL
VIDLVRAEEAIFKDIKPKTRYNIRLAQSKGISVFNASVEMLPLFYKLYLQTAKRNGFLPGSYRHFSALFSPVDHNPGSSE
VLFLLAARGQDVLAGAIIAISGRQAIYLYGASSNEQRNQMGSYALHWEAIKLARQKGCLTYDMGSVSPVSDPGHPFYGMY
RFKTGFGGKIVHRNGTWDYPVNRRGYRAFRNYETSFNMTIPK
>Mature_362_residues
MIQVNVDIKPKKIHALFPTDIFFQTTYWGRVKSHLGWKPVAFDFNSSTGLQGDVMVLIKTLKHDFAAAYVPQGPELGPDP
EKYGLFLESLSQELTKYMDSTVAFIRYDLPWVSPYAIDATDGRTWPGHPAPELRELRMNIGTRTWPLRKAPIDLTVADAL
VIDLVRAEEAIFKDIKPKTRYNIRLAQSKGISVFNASVEMLPLFYKLYLQTAKRNGFLPGSYRHFSALFSPVDHNPGSSE
VLFLLAARGQDVLAGAIIAISGRQAIYLYGASSNEQRNQMGSYALHWEAIKLARQKGCLTYDMGSVSPVSDPGHPFYGMY
RFKTGFGGKIVHRNGTWDYPVNRRGYRAFRNYETSFNMTIPK

Specific function: Catalyzes the incorporation of amino acid(s) into the interchain peptide bridge of peptidoglycan, using aminoacyl-tRNA as amino acid donor [H]

COG id: COG2348

COG function: function code V; Uncharacterized protein involved in methicillin resistance

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the femABX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016181
- InterPro:   IPR003447 [H]

Pfam domain/function: PF02388 FemAB [H]

EC number: NA

Molecular weight: Translated: 40890; Mature: 40890

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQVNVDIKPKKIHALFPTDIFFQTTYWGRVKSHLGWKPVAFDFNSSTGLQGDVMVLIKT
CEEEEEECCCCEEEEECCCCEEEEEEHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHH
LKHDFAAAYVPQGPELGPDPEKYGLFLESLSQELTKYMDSTVAFIRYDLPWVSPYAIDAT
HHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEECC
DGRTWPGHPAPELRELRMNIGTRTWPLRKAPIDLTVADALVIDLVRAEEAIFKDIKPKTR
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCE
YNIRLAQSKGISVFNASVEMLPLFYKLYLQTAKRNGFLPGSYRHFSALFSPVDHNPGSSE
EEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCE
VLFLLAARGQDVLAGAIIAISGRQAIYLYGASSNEQRNQMGSYALHWEAIKLARQKGCLT
EEEEEECCCCCCEEEEEEEEECCEEEEEEECCCCHHHHHHCCEEEHHHHHHHHHHCCCEE
YDMGSVSPVSDPGHPFYGMYRFKTGFGGKIVHRNGTWDYPVNRRGYRAFRNYETSFNMTI
EECCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCHHHHHHCCCCEEEEEC
PK
CC
>Mature Secondary Structure
MIQVNVDIKPKKIHALFPTDIFFQTTYWGRVKSHLGWKPVAFDFNSSTGLQGDVMVLIKT
CEEEEEECCCCEEEEECCCCEEEEEEHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHH
LKHDFAAAYVPQGPELGPDPEKYGLFLESLSQELTKYMDSTVAFIRYDLPWVSPYAIDAT
HHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEECC
DGRTWPGHPAPELRELRMNIGTRTWPLRKAPIDLTVADALVIDLVRAEEAIFKDIKPKTR
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCE
YNIRLAQSKGISVFNASVEMLPLFYKLYLQTAKRNGFLPGSYRHFSALFSPVDHNPGSSE
EEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCE
VLFLLAARGQDVLAGAIIAISGRQAIYLYGASSNEQRNQMGSYALHWEAIKLARQKGCLT
EEEEEECCCCCCEEEEEEEEECCEEEEEEECCCCHHHHHHCCEEEHHHHHHHHHHCCCEE
YDMGSVSPVSDPGHPFYGMYRFKTGFGGKIVHRNGTWDYPVNRRGYRAFRNYETSFNMTI
EECCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCHHHHHHCCCCEEEEEC
PK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA