| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is fliI [H]
Identifier: 85858820
GI number: 85858820
Start: 1010074
End: 1011441
Strand: Direct
Name: fliI [H]
Synonym: SYN_01473
Alternate gene names: 85858820
Gene position: 1010074-1011441 (Clockwise)
Preceding gene: 85858819
Following gene: 85858821
Centisome position: 31.77
GC content: 52.05
Gene sequence:
>1368_bases ATGCAGACGGACATACATCAATCAGCTCCCCGGAATTCTTCTATCGATCTTTCACGATATCAACGGATTCTGAAAAAGAT TCAGCCGATCAAAGTTTACGGCAGGGTGAGTGAAATTGTCGGACTCGTGGTCGAAGGTCAGGGACCGGCTGCTTCCATCG GGGAAATGTGTTCTCTCCTGCCTCATGATAGCAAACCCGTTTTTGCCGAAGTGGTGGGGTTTAAGAAGGGCAAGGTGATT CTGATGCCTCTTGAAGAGGTTCAGGGGCTGGGACCAGGCTGCCCGATCAAATCACTGGGAAAAAAAGCGGCAGTGAAAGT GGGCGCGGGACTTCTGGGGCGTGTGATCGACGGCGTGGGGAATCCCATAGACAACAGGGGACCGATCGATACGGAAGAGG AGTATCCCCTGTATGCCGAGCCCATTAACCCCCTTGCGCGGGGACGCATTTCCGATCCTATTGATTTCGGAGTCAAGGTC CTCAACGGTCTGTTCAGTTGTGGCAAGGGGCAGCGGATGGGAATTTTCGCGGGATCAGGCGTCGGTAAAAGCGTCCTTAT GGGAATGATTGCGCGGAACACGAGTGCCGATATCAATGTCATCGGCCTGATCGGCGAACGTGGGCGGGAAGTCCGGGAAT TTCTGGAGAAAAACCTGGGAAAAGAGGGACTTGCCCGATCCGTGGTCGTGGTGGCGGCGTCGGATATGCACCCTTTGATA AGAATGAGGGCGGCTCATGTGGCGACGACCGTATCGGAATATTTCCGGGATCAGGGGCGGGACGTCCTGCTTATGGTTGA TTCGCTGACCCGCTTTGCCATGGCCCAGAGGGAAATTGGACTTTCCGTGGGAGAGCCTCCGACAACGAAAGGCTATACAC CTTCTGTTTTCAGTCTTCTGCCGAAACTTCTGGAAAGGGCAGGCAAGGTTGAAGGCAGAGGGAGCATCACCGGTTTATAT ACCATCCTGGTCGAAGGCGATGATTTCAACGAACCCATTTCTGATGCCGCAAGATCGATCCTGGACGGTCACCTTTACCT GTCGCGGGAACTGGCCGCCAAAAACCATTATCCTGCCGTGGATGTTCTCAACAGCATCAGCAGGGTCATGATCGACATCG TCAGTGAGAAGCACAGAAATATGGCGAATCGAATTCTGAGTATCATTGCAGCCCATAAAAAAGCTGAGGAATTGATCAAT ATCGGTGCCTATGTTCATGGAAGCAATGCGGAGATCGATTATGCTATTCGAATGATCGACAAGGTCAATGATTTTCTGAG GCAGGATATTCATGAACGATTCGATGCCGAACAGACGGCGGGGATGATGGCAGCGTTCTTTTCAGAGGAGATGATGGATC ATGTTTAA
Upstream 100 bases:
>100_bases GGATGCCCGCATCAGTGAACAACTCCAGGAAGTCAAAGCCGGTCTACTGAGCCTCCATGCCTCATAGGCATACTTCCGCC GAGAAAGAATCTCTCAGAAA
Downstream 100 bases:
>100_bases GTTTCGCCTGCAGACGGTTTTGGAATATCGAAAGATTCTGGAGGAGAAGATGCTGATCCGTTTCTCCGAATCGGCAAGGC GTCTTGACGAGGAAAAAAGG
Product: flagellum-specific ATP synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MQTDIHQSAPRNSSIDLSRYQRILKKIQPIKVYGRVSEIVGLVVEGQGPAASIGEMCSLLPHDSKPVFAEVVGFKKGKVI LMPLEEVQGLGPGCPIKSLGKKAAVKVGAGLLGRVIDGVGNPIDNRGPIDTEEEYPLYAEPINPLARGRISDPIDFGVKV LNGLFSCGKGQRMGIFAGSGVGKSVLMGMIARNTSADINVIGLIGERGREVREFLEKNLGKEGLARSVVVVAASDMHPLI RMRAAHVATTVSEYFRDQGRDVLLMVDSLTRFAMAQREIGLSVGEPPTTKGYTPSVFSLLPKLLERAGKVEGRGSITGLY TILVEGDDFNEPISDAARSILDGHLYLSRELAAKNHYPAVDVLNSISRVMIDIVSEKHRNMANRILSIIAAHKKAEELIN IGAYVHGSNAEIDYAIRMIDKVNDFLRQDIHERFDAEQTAGMMAAFFSEEMMDHV
Sequences:
>Translated_455_residues MQTDIHQSAPRNSSIDLSRYQRILKKIQPIKVYGRVSEIVGLVVEGQGPAASIGEMCSLLPHDSKPVFAEVVGFKKGKVI LMPLEEVQGLGPGCPIKSLGKKAAVKVGAGLLGRVIDGVGNPIDNRGPIDTEEEYPLYAEPINPLARGRISDPIDFGVKV LNGLFSCGKGQRMGIFAGSGVGKSVLMGMIARNTSADINVIGLIGERGREVREFLEKNLGKEGLARSVVVVAASDMHPLI RMRAAHVATTVSEYFRDQGRDVLLMVDSLTRFAMAQREIGLSVGEPPTTKGYTPSVFSLLPKLLERAGKVEGRGSITGLY TILVEGDDFNEPISDAARSILDGHLYLSRELAAKNHYPAVDVLNSISRVMIDIVSEKHRNMANRILSIIAAHKKAEELIN IGAYVHGSNAEIDYAIRMIDKVNDFLRQDIHERFDAEQTAGMMAAFFSEEMMDHV >Mature_455_residues MQTDIHQSAPRNSSIDLSRYQRILKKIQPIKVYGRVSEIVGLVVEGQGPAASIGEMCSLLPHDSKPVFAEVVGFKKGKVI LMPLEEVQGLGPGCPIKSLGKKAAVKVGAGLLGRVIDGVGNPIDNRGPIDTEEEYPLYAEPINPLARGRISDPIDFGVKV LNGLFSCGKGQRMGIFAGSGVGKSVLMGMIARNTSADINVIGLIGERGREVREFLEKNLGKEGLARSVVVVAASDMHPLI RMRAAHVATTVSEYFRDQGRDVLLMVDSLTRFAMAQREIGLSVGEPPTTKGYTPSVFSLLPKLLERAGKVEGRGSITGLY TILVEGDDFNEPISDAARSILDGHLYLSRELAAKNHYPAVDVLNSISRVMIDIVSEKHRNMANRILSIIAAHKKAEELIN IGAYVHGSNAEIDYAIRMIDKVNDFLRQDIHERFDAEQTAGMMAAFFSEEMMDHV
Specific function: Probable catalytic subunit of a protein translocase for flagellum-specific export, or a proton translocase involved in local circuits at the flagellum [H]
COG id: COG1157
COG function: function code NU; Flagellar biosynthesis/type III secretory pathway ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATPase alpha/beta chains family [H]
Homologues:
Organism=Homo sapiens, GI32189394, Length=324, Percent_Identity=34.5679012345679, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI19913428, Length=455, Percent_Identity=25.0549450549451, Blast_Score=129, Evalue=8e-30, Organism=Homo sapiens, GI50345984, Length=336, Percent_Identity=30.0595238095238, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI4757810, Length=336, Percent_Identity=30.0595238095238, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI19913424, Length=329, Percent_Identity=31.0030395136778, Blast_Score=127, Evalue=1e-29, Organism=Homo sapiens, GI19913426, Length=374, Percent_Identity=25.4010695187166, Blast_Score=121, Evalue=1e-27, Organism=Escherichia coli, GI1788251, Length=431, Percent_Identity=47.0997679814385, Blast_Score=385, Evalue=1e-108, Organism=Escherichia coli, GI1790170, Length=375, Percent_Identity=29.0666666666667, Blast_Score=159, Evalue=3e-40, Organism=Escherichia coli, GI1790172, Length=412, Percent_Identity=27.6699029126214, Blast_Score=135, Evalue=5e-33, Organism=Escherichia coli, GI1790217, Length=252, Percent_Identity=27.3809523809524, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI25144756, Length=373, Percent_Identity=31.3672922252011, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI71988080, Length=368, Percent_Identity=28.2608695652174, Blast_Score=131, Evalue=6e-31, Organism=Caenorhabditis elegans, GI71988063, Length=368, Percent_Identity=28.2608695652174, Blast_Score=131, Evalue=7e-31, Organism=Caenorhabditis elegans, GI17570191, Length=451, Percent_Identity=23.7250554323725, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17565854, Length=320, Percent_Identity=28.75, Blast_Score=127, Evalue=8e-30, Organism=Caenorhabditis elegans, GI17510931, Length=311, Percent_Identity=27.0096463022508, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI71988074, Length=342, Percent_Identity=26.6081871345029, Blast_Score=111, Evalue=8e-25, Organism=Saccharomyces cerevisiae, GI6322581, Length=409, Percent_Identity=29.0953545232274, Blast_Score=166, Evalue=7e-42, Organism=Saccharomyces cerevisiae, GI6319370, Length=367, Percent_Identity=29.1553133514986, Blast_Score=148, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6319603, Length=462, Percent_Identity=25.974025974026, Blast_Score=135, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6320016, Length=276, Percent_Identity=27.536231884058, Blast_Score=98, Evalue=3e-21, Organism=Drosophila melanogaster, GI24638766, Length=329, Percent_Identity=33.1306990881459, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI28574560, Length=329, Percent_Identity=32.2188449848024, Blast_Score=150, Evalue=1e-36, Organism=Drosophila melanogaster, GI24658560, Length=331, Percent_Identity=29.9093655589124, Blast_Score=133, Evalue=3e-31, Organism=Drosophila melanogaster, GI281361666, Length=455, Percent_Identity=23.956043956044, Blast_Score=129, Evalue=5e-30, Organism=Drosophila melanogaster, GI24646341, Length=455, Percent_Identity=23.956043956044, Blast_Score=129, Evalue=5e-30, Organism=Drosophila melanogaster, GI17136796, Length=455, Percent_Identity=23.956043956044, Blast_Score=129, Evalue=5e-30, Organism=Drosophila melanogaster, GI24583992, Length=318, Percent_Identity=28.3018867924528, Blast_Score=125, Evalue=5e-29, Organism=Drosophila melanogaster, GI24583988, Length=318, Percent_Identity=28.3018867924528, Blast_Score=125, Evalue=7e-29, Organism=Drosophila melanogaster, GI24583986, Length=318, Percent_Identity=28.3018867924528, Blast_Score=125, Evalue=7e-29, Organism=Drosophila melanogaster, GI24583984, Length=318, Percent_Identity=28.3018867924528, Blast_Score=125, Evalue=7e-29, Organism=Drosophila melanogaster, GI20129479, Length=322, Percent_Identity=29.8136645962733, Blast_Score=120, Evalue=1e-27,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000225 - InterPro: IPR020003 - InterPro: IPR000194 - InterPro: IPR003593 - InterPro: IPR004100 - InterPro: IPR005714 - InterPro: IPR022425 [H]
Pfam domain/function: PF00006 ATP-synt_ab; PF02874 ATP-synt_ab_N [H]
EC number: =3.6.3.14 [H]
Molecular weight: Translated: 49528; Mature: 49528
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: PS00152 ATPASE_ALPHA_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTDIHQSAPRNSSIDLSRYQRILKKIQPIKVYGRVSEIVGLVVEGQGPAASIGEMCSLL CCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHEEEEECCCCCCCHHHHHHHC PHDSKPVFAEVVGFKKGKVILMPLEEVQGLGPGCPIKSLGKKAAVKVGAGLLGRVIDGVG CCCCCCHHHHHHCCCCCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC NPIDNRGPIDTEEEYPLYAEPINPLARGRISDPIDFGVKVLNGLFSCGKGQRMGIFAGSG CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCC VGKSVLMGMIARNTSADINVIGLIGERGREVREFLEKNLGKEGLARSVVVVAASDMHPLI CCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHCEEEEEEECCCHHHH RMRAAHVATTVSEYFRDQGRDVLLMVDSLTRFAMAQREIGLSVGEPPTTKGYTPSVFSLL HHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH PKLLERAGKVEGRGSITGLYTILVEGDDFNEPISDAARSILDGHLYLSRELAAKNHYPAV HHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH DVLNSISRVMIDIVSEKHRNMANRILSIIAAHKKAEELINIGAYVHGSNAEIDYAIRMID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHH KVNDFLRQDIHERFDAEQTAGMMAAFFSEEMMDHV HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQTDIHQSAPRNSSIDLSRYQRILKKIQPIKVYGRVSEIVGLVVEGQGPAASIGEMCSLL CCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHEEEEECCCCCCCHHHHHHHC PHDSKPVFAEVVGFKKGKVILMPLEEVQGLGPGCPIKSLGKKAAVKVGAGLLGRVIDGVG CCCCCCHHHHHHCCCCCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC NPIDNRGPIDTEEEYPLYAEPINPLARGRISDPIDFGVKVLNGLFSCGKGQRMGIFAGSG CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCC VGKSVLMGMIARNTSADINVIGLIGERGREVREFLEKNLGKEGLARSVVVVAASDMHPLI CCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHCEEEEEEECCCHHHH RMRAAHVATTVSEYFRDQGRDVLLMVDSLTRFAMAQREIGLSVGEPPTTKGYTPSVFSLL HHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH PKLLERAGKVEGRGSITGLYTILVEGDDFNEPISDAARSILDGHLYLSRELAAKNHYPAV HHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH DVLNSISRVMIDIVSEKHRNMANRILSIIAAHKKAEELINIGAYVHGSNAEIDYAIRMID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHH KVNDFLRQDIHERFDAEQTAGMMAAFFSEEMMDHV HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1828465; 9384377 [H]