Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is fliI [H]

Identifier: 85858820

GI number: 85858820

Start: 1010074

End: 1011441

Strand: Direct

Name: fliI [H]

Synonym: SYN_01473

Alternate gene names: 85858820

Gene position: 1010074-1011441 (Clockwise)

Preceding gene: 85858819

Following gene: 85858821

Centisome position: 31.77

GC content: 52.05

Gene sequence:

>1368_bases
ATGCAGACGGACATACATCAATCAGCTCCCCGGAATTCTTCTATCGATCTTTCACGATATCAACGGATTCTGAAAAAGAT
TCAGCCGATCAAAGTTTACGGCAGGGTGAGTGAAATTGTCGGACTCGTGGTCGAAGGTCAGGGACCGGCTGCTTCCATCG
GGGAAATGTGTTCTCTCCTGCCTCATGATAGCAAACCCGTTTTTGCCGAAGTGGTGGGGTTTAAGAAGGGCAAGGTGATT
CTGATGCCTCTTGAAGAGGTTCAGGGGCTGGGACCAGGCTGCCCGATCAAATCACTGGGAAAAAAAGCGGCAGTGAAAGT
GGGCGCGGGACTTCTGGGGCGTGTGATCGACGGCGTGGGGAATCCCATAGACAACAGGGGACCGATCGATACGGAAGAGG
AGTATCCCCTGTATGCCGAGCCCATTAACCCCCTTGCGCGGGGACGCATTTCCGATCCTATTGATTTCGGAGTCAAGGTC
CTCAACGGTCTGTTCAGTTGTGGCAAGGGGCAGCGGATGGGAATTTTCGCGGGATCAGGCGTCGGTAAAAGCGTCCTTAT
GGGAATGATTGCGCGGAACACGAGTGCCGATATCAATGTCATCGGCCTGATCGGCGAACGTGGGCGGGAAGTCCGGGAAT
TTCTGGAGAAAAACCTGGGAAAAGAGGGACTTGCCCGATCCGTGGTCGTGGTGGCGGCGTCGGATATGCACCCTTTGATA
AGAATGAGGGCGGCTCATGTGGCGACGACCGTATCGGAATATTTCCGGGATCAGGGGCGGGACGTCCTGCTTATGGTTGA
TTCGCTGACCCGCTTTGCCATGGCCCAGAGGGAAATTGGACTTTCCGTGGGAGAGCCTCCGACAACGAAAGGCTATACAC
CTTCTGTTTTCAGTCTTCTGCCGAAACTTCTGGAAAGGGCAGGCAAGGTTGAAGGCAGAGGGAGCATCACCGGTTTATAT
ACCATCCTGGTCGAAGGCGATGATTTCAACGAACCCATTTCTGATGCCGCAAGATCGATCCTGGACGGTCACCTTTACCT
GTCGCGGGAACTGGCCGCCAAAAACCATTATCCTGCCGTGGATGTTCTCAACAGCATCAGCAGGGTCATGATCGACATCG
TCAGTGAGAAGCACAGAAATATGGCGAATCGAATTCTGAGTATCATTGCAGCCCATAAAAAAGCTGAGGAATTGATCAAT
ATCGGTGCCTATGTTCATGGAAGCAATGCGGAGATCGATTATGCTATTCGAATGATCGACAAGGTCAATGATTTTCTGAG
GCAGGATATTCATGAACGATTCGATGCCGAACAGACGGCGGGGATGATGGCAGCGTTCTTTTCAGAGGAGATGATGGATC
ATGTTTAA

Upstream 100 bases:

>100_bases
GGATGCCCGCATCAGTGAACAACTCCAGGAAGTCAAAGCCGGTCTACTGAGCCTCCATGCCTCATAGGCATACTTCCGCC
GAGAAAGAATCTCTCAGAAA

Downstream 100 bases:

>100_bases
GTTTCGCCTGCAGACGGTTTTGGAATATCGAAAGATTCTGGAGGAGAAGATGCTGATCCGTTTCTCCGAATCGGCAAGGC
GTCTTGACGAGGAAAAAAGG

Product: flagellum-specific ATP synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MQTDIHQSAPRNSSIDLSRYQRILKKIQPIKVYGRVSEIVGLVVEGQGPAASIGEMCSLLPHDSKPVFAEVVGFKKGKVI
LMPLEEVQGLGPGCPIKSLGKKAAVKVGAGLLGRVIDGVGNPIDNRGPIDTEEEYPLYAEPINPLARGRISDPIDFGVKV
LNGLFSCGKGQRMGIFAGSGVGKSVLMGMIARNTSADINVIGLIGERGREVREFLEKNLGKEGLARSVVVVAASDMHPLI
RMRAAHVATTVSEYFRDQGRDVLLMVDSLTRFAMAQREIGLSVGEPPTTKGYTPSVFSLLPKLLERAGKVEGRGSITGLY
TILVEGDDFNEPISDAARSILDGHLYLSRELAAKNHYPAVDVLNSISRVMIDIVSEKHRNMANRILSIIAAHKKAEELIN
IGAYVHGSNAEIDYAIRMIDKVNDFLRQDIHERFDAEQTAGMMAAFFSEEMMDHV

Sequences:

>Translated_455_residues
MQTDIHQSAPRNSSIDLSRYQRILKKIQPIKVYGRVSEIVGLVVEGQGPAASIGEMCSLLPHDSKPVFAEVVGFKKGKVI
LMPLEEVQGLGPGCPIKSLGKKAAVKVGAGLLGRVIDGVGNPIDNRGPIDTEEEYPLYAEPINPLARGRISDPIDFGVKV
LNGLFSCGKGQRMGIFAGSGVGKSVLMGMIARNTSADINVIGLIGERGREVREFLEKNLGKEGLARSVVVVAASDMHPLI
RMRAAHVATTVSEYFRDQGRDVLLMVDSLTRFAMAQREIGLSVGEPPTTKGYTPSVFSLLPKLLERAGKVEGRGSITGLY
TILVEGDDFNEPISDAARSILDGHLYLSRELAAKNHYPAVDVLNSISRVMIDIVSEKHRNMANRILSIIAAHKKAEELIN
IGAYVHGSNAEIDYAIRMIDKVNDFLRQDIHERFDAEQTAGMMAAFFSEEMMDHV
>Mature_455_residues
MQTDIHQSAPRNSSIDLSRYQRILKKIQPIKVYGRVSEIVGLVVEGQGPAASIGEMCSLLPHDSKPVFAEVVGFKKGKVI
LMPLEEVQGLGPGCPIKSLGKKAAVKVGAGLLGRVIDGVGNPIDNRGPIDTEEEYPLYAEPINPLARGRISDPIDFGVKV
LNGLFSCGKGQRMGIFAGSGVGKSVLMGMIARNTSADINVIGLIGERGREVREFLEKNLGKEGLARSVVVVAASDMHPLI
RMRAAHVATTVSEYFRDQGRDVLLMVDSLTRFAMAQREIGLSVGEPPTTKGYTPSVFSLLPKLLERAGKVEGRGSITGLY
TILVEGDDFNEPISDAARSILDGHLYLSRELAAKNHYPAVDVLNSISRVMIDIVSEKHRNMANRILSIIAAHKKAEELIN
IGAYVHGSNAEIDYAIRMIDKVNDFLRQDIHERFDAEQTAGMMAAFFSEEMMDHV

Specific function: Probable catalytic subunit of a protein translocase for flagellum-specific export, or a proton translocase involved in local circuits at the flagellum [H]

COG id: COG1157

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway ATPase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=324, Percent_Identity=34.5679012345679, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI19913428, Length=455, Percent_Identity=25.0549450549451, Blast_Score=129, Evalue=8e-30,
Organism=Homo sapiens, GI50345984, Length=336, Percent_Identity=30.0595238095238, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI4757810, Length=336, Percent_Identity=30.0595238095238, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI19913424, Length=329, Percent_Identity=31.0030395136778, Blast_Score=127, Evalue=1e-29,
Organism=Homo sapiens, GI19913426, Length=374, Percent_Identity=25.4010695187166, Blast_Score=121, Evalue=1e-27,
Organism=Escherichia coli, GI1788251, Length=431, Percent_Identity=47.0997679814385, Blast_Score=385, Evalue=1e-108,
Organism=Escherichia coli, GI1790170, Length=375, Percent_Identity=29.0666666666667, Blast_Score=159, Evalue=3e-40,
Organism=Escherichia coli, GI1790172, Length=412, Percent_Identity=27.6699029126214, Blast_Score=135, Evalue=5e-33,
Organism=Escherichia coli, GI1790217, Length=252, Percent_Identity=27.3809523809524, Blast_Score=67, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI25144756, Length=373, Percent_Identity=31.3672922252011, Blast_Score=155, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI71988080, Length=368, Percent_Identity=28.2608695652174, Blast_Score=131, Evalue=6e-31,
Organism=Caenorhabditis elegans, GI71988063, Length=368, Percent_Identity=28.2608695652174, Blast_Score=131, Evalue=7e-31,
Organism=Caenorhabditis elegans, GI17570191, Length=451, Percent_Identity=23.7250554323725, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17565854, Length=320, Percent_Identity=28.75, Blast_Score=127, Evalue=8e-30,
Organism=Caenorhabditis elegans, GI17510931, Length=311, Percent_Identity=27.0096463022508, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI71988074, Length=342, Percent_Identity=26.6081871345029, Blast_Score=111, Evalue=8e-25,
Organism=Saccharomyces cerevisiae, GI6322581, Length=409, Percent_Identity=29.0953545232274, Blast_Score=166, Evalue=7e-42,
Organism=Saccharomyces cerevisiae, GI6319370, Length=367, Percent_Identity=29.1553133514986, Blast_Score=148, Evalue=2e-36,
Organism=Saccharomyces cerevisiae, GI6319603, Length=462, Percent_Identity=25.974025974026, Blast_Score=135, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6320016, Length=276, Percent_Identity=27.536231884058, Blast_Score=98, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24638766, Length=329, Percent_Identity=33.1306990881459, Blast_Score=167, Evalue=2e-41,
Organism=Drosophila melanogaster, GI28574560, Length=329, Percent_Identity=32.2188449848024, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI24658560, Length=331, Percent_Identity=29.9093655589124, Blast_Score=133, Evalue=3e-31,
Organism=Drosophila melanogaster, GI281361666, Length=455, Percent_Identity=23.956043956044, Blast_Score=129, Evalue=5e-30,
Organism=Drosophila melanogaster, GI24646341, Length=455, Percent_Identity=23.956043956044, Blast_Score=129, Evalue=5e-30,
Organism=Drosophila melanogaster, GI17136796, Length=455, Percent_Identity=23.956043956044, Blast_Score=129, Evalue=5e-30,
Organism=Drosophila melanogaster, GI24583992, Length=318, Percent_Identity=28.3018867924528, Blast_Score=125, Evalue=5e-29,
Organism=Drosophila melanogaster, GI24583988, Length=318, Percent_Identity=28.3018867924528, Blast_Score=125, Evalue=7e-29,
Organism=Drosophila melanogaster, GI24583986, Length=318, Percent_Identity=28.3018867924528, Blast_Score=125, Evalue=7e-29,
Organism=Drosophila melanogaster, GI24583984, Length=318, Percent_Identity=28.3018867924528, Blast_Score=125, Evalue=7e-29,
Organism=Drosophila melanogaster, GI20129479, Length=322, Percent_Identity=29.8136645962733, Blast_Score=120, Evalue=1e-27,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000225
- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR004100
- InterPro:   IPR005714
- InterPro:   IPR022425 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 49528; Mature: 49528

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTDIHQSAPRNSSIDLSRYQRILKKIQPIKVYGRVSEIVGLVVEGQGPAASIGEMCSLL
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHEEEEECCCCCCCHHHHHHHC
PHDSKPVFAEVVGFKKGKVILMPLEEVQGLGPGCPIKSLGKKAAVKVGAGLLGRVIDGVG
CCCCCCHHHHHHCCCCCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
NPIDNRGPIDTEEEYPLYAEPINPLARGRISDPIDFGVKVLNGLFSCGKGQRMGIFAGSG
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCC
VGKSVLMGMIARNTSADINVIGLIGERGREVREFLEKNLGKEGLARSVVVVAASDMHPLI
CCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHCEEEEEEECCCHHHH
RMRAAHVATTVSEYFRDQGRDVLLMVDSLTRFAMAQREIGLSVGEPPTTKGYTPSVFSLL
HHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
PKLLERAGKVEGRGSITGLYTILVEGDDFNEPISDAARSILDGHLYLSRELAAKNHYPAV
HHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH
DVLNSISRVMIDIVSEKHRNMANRILSIIAAHKKAEELINIGAYVHGSNAEIDYAIRMID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHH
KVNDFLRQDIHERFDAEQTAGMMAAFFSEEMMDHV
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQTDIHQSAPRNSSIDLSRYQRILKKIQPIKVYGRVSEIVGLVVEGQGPAASIGEMCSLL
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHEEEEECCCCCCCHHHHHHHC
PHDSKPVFAEVVGFKKGKVILMPLEEVQGLGPGCPIKSLGKKAAVKVGAGLLGRVIDGVG
CCCCCCHHHHHHCCCCCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
NPIDNRGPIDTEEEYPLYAEPINPLARGRISDPIDFGVKVLNGLFSCGKGQRMGIFAGSG
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCC
VGKSVLMGMIARNTSADINVIGLIGERGREVREFLEKNLGKEGLARSVVVVAASDMHPLI
CCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHCEEEEEEECCCHHHH
RMRAAHVATTVSEYFRDQGRDVLLMVDSLTRFAMAQREIGLSVGEPPTTKGYTPSVFSLL
HHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
PKLLERAGKVEGRGSITGLYTILVEGDDFNEPISDAARSILDGHLYLSRELAAKNHYPAV
HHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH
DVLNSISRVMIDIVSEKHRNMANRILSIIAAHKKAEELINIGAYVHGSNAEIDYAIRMID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHH
KVNDFLRQDIHERFDAEQTAGMMAAFFSEEMMDHV
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1828465; 9384377 [H]