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The map label for this gene is flgC [H]

Identifier: 85858815

GI number: 85858815

Start: 1005909

End: 1006340

Strand: Direct

Name: flgC [H]

Synonym: SYN_01468

Alternate gene names: 85858815

Gene position: 1005909-1006340 (Clockwise)

Preceding gene: 85858814

Following gene: 85858816

Centisome position: 31.64

GC content: 49.54

Gene sequence:

>432_bases
ATGGATTTTCTCACGTCTTTTCGCATATGCAGCTCAGGGTTTGCTGCTCAAAGGGCAAAAATGGATGTTATTGCCAGCAA
TCTGGCCAATGTCAGTACCACCAGCACTCCTGAAGGAGGACCGTATAAGCGTAAGGTGGCGATTTTTTCATCGGAAAACG
TGAAGCAAAAATTCCGTTTCGGCGACAGACTTCGAGATGCGATCAGGGAAGTGGCCCTTAAGGAAGTAGTCGAAGACGGG
GAGACCGTCAGGAAAGTCTACGATCCTTCCCATCCGGATGCGGATCAACAGGGCAACGTGGCGATGCCGAATGTAAACGT
CATGATGGAAATGACCGACATGATTACTGCCAGCAGGGCCTACGAGGCTTGCGTCACTGCTTTTGATGCTACAAAAAACA
TGGCGTTGAAGACGCTGGATATCGGGAAATAG

Upstream 100 bases:

>100_bases
ACTCATCTTGCCGAAAATCATCTCAGGTACAACCTGACGGTTGAAATGCTTGCTCGCAAATTCAAGGGATTGAACACCGT
ATTGAAGGAGACGAAATAAT

Downstream 100 bases:

>100_bases
TTCCATCACAGGGAAAGAATCCGATTCGTCAATCAGATCGGAGATTATTGAAGAGGTGAGATAATGAAAGACTTATCAAT
TCAGGACAGATTCCATCTTC

Product: flagellar basal-body rod protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MDFLTSFRICSSGFAAQRAKMDVIASNLANVSTTSTPEGGPYKRKVAIFSSENVKQKFRFGDRLRDAIREVALKEVVEDG
ETVRKVYDPSHPDADQQGNVAMPNVNVMMEMTDMITASRAYEACVTAFDATKNMALKTLDIGK

Sequences:

>Translated_143_residues
MDFLTSFRICSSGFAAQRAKMDVIASNLANVSTTSTPEGGPYKRKVAIFSSENVKQKFRFGDRLRDAIREVALKEVVEDG
ETVRKVYDPSHPDADQQGNVAMPNVNVMMEMTDMITASRAYEACVTAFDATKNMALKTLDIGK
>Mature_143_residues
MDFLTSFRICSSGFAAQRAKMDVIASNLANVSTTSTPEGGPYKRKVAIFSSENVKQKFRFGDRLRDAIREVALKEVVEDG
ETVRKVYDPSHPDADQQGNVAMPNVNVMMEMTDMITASRAYEACVTAFDATKNMALKTLDIGK

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=143, Percent_Identity=36.3636363636364, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 15779; Mature: 15779

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFLTSFRICSSGFAAQRAKMDVIASNLANVSTTSTPEGGPYKRKVAIFSSENVKQKFRF
CCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHH
GDRLRDAIREVALKEVVEDGETVRKVYDPSHPDADQQGNVAMPNVNVMMEMTDMITASRA
HHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHH
YEACVTAFDATKNMALKTLDIGK
HHHHHHHHHHHCCCEEEEECCCC
>Mature Secondary Structure
MDFLTSFRICSSGFAAQRAKMDVIASNLANVSTTSTPEGGPYKRKVAIFSSENVKQKFRF
CCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHH
GDRLRDAIREVALKEVVEDGETVRKVYDPSHPDADQQGNVAMPNVNVMMEMTDMITASRA
HHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHH
YEACVTAFDATKNMALKTLDIGK
HHHHHHHHHHHCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]