| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is wcaI [C]
Identifier: 85858702
GI number: 85858702
Start: 883922
End: 885064
Strand: Direct
Name: wcaI [C]
Synonym: SYN_00131
Alternate gene names: 85858702
Gene position: 883922-885064 (Clockwise)
Preceding gene: 85858701
Following gene: 85858703
Centisome position: 27.8
GC content: 47.86
Gene sequence:
>1143_bases ATGAAAGAGGTTTTTTTTCAGAAATCGAGGCCGAACATCGGGTTCCAGAGAAATCTTATCAATTCAGGAGAATGGTGCCG CATGTCTTCGCTGCTGTGGTGGGGCCGCTCTGACCGGGATTATTCCCGGAATCGCATCGTGTTGACATTACTGTCAGAGA TGGGATTTCAAATTCAATATTTCCACCCCCGCTCCAGCTATACCGGCTTTATGGAGGCACATTTCCATGACTTCGAAAAG CCCGATGTGATATGGGTGCCCTGCTTCCGGCAAAAGGATATTTTGTCCGCATCCCGCTGGGCAAAAAAATGGAACATTCC TCTTATTGTTGATCCTTTGATTTCCGCGTATGAAAAAGAGGTTTTTGAACGCAACAAATGGAGCCCTGAATCACGTAAGG CAGAAAAAAGAAGGTTGTGGGAAGCCGATCTGTTTTCTCTTGCCGATGTCGTCGTTGCCGATACGCCTGCGCATGCAGAA TTTTTTTCAGAAACCCTTGGAGTGAATCCGCGGATGCTTTCCGTACTTTATGTAAGTGCGGAAACCGATTTCTTTAAATC GGCATCTTCAGAAAGAAATCCTGCTTCCGGCCGGCATGAAATTCTGTTTTATGGAAGTTTTCTGCAGCTTCAGGGCGTGG ATACGATTGTGCAGGCTGCAGGAATCTTTCCTGACATGAATGTCCGGTGGGTACTGCTGGGTGATGGAGAGTTGAAGCCG GCGATGGAAAAGGCGGCCAGGAGGCATAAGAACATTGCCTTTGAACCGTGGATACCCTATGCGAGTCTGCCGAGTAGAAT AGCGCAGGCCGATATATTACTTGGAATCTTCGGTTCCACAAAGAAAGCGGAACTTGTCATACCCAACAAGATGTTCCAGG CCATGGCGGCCGGCAAACCCGTAATCACAAGGTATTCAAAAGCCTATCCTCCGGACATGTTCGCGTCGGACGTGATCGGA TGGGTTCCCTGCGGGGATCCTGCATCACTCGCGGAAAAGGTGCGGGAATGGATAAGGGAACCGGAGAAGCTTGCACAAAG AGGAGAAAAAACAAGGGAACTTTTTGACAGGTTTTTTAGTAAGGAAAAAATGAAGGAAATGCTCAGCAATATACTCTCAA AGGCATCAGGTGAGAATTTCTGA
Upstream 100 bases:
>100_bases GAAAATGGGTGGTCAGTCAATTCACTGTTACAAAGATGTGCGAAAAAACAGTCGCCCTCTATCAGGAACTGCTTTTGAGG AAGAGTAGCTGGTCTCAGAT
Downstream 100 bases:
>100_bases GATGGTTCTGCAGAGTGACCGGCGATGGGCGATATCACTTGACAGATTCTGCATGATCATGGGTTCTTTACTGCCTGCCG GTATCGTCGCCGGCAATGCC
Product: glycosyltransferase
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Capsular Polysaccharide Biosynthesis F; Glycosyl Transferase Group 1 Family
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MKEVFFQKSRPNIGFQRNLINSGEWCRMSSLLWWGRSDRDYSRNRIVLTLLSEMGFQIQYFHPRSSYTGFMEAHFHDFEK PDVIWVPCFRQKDILSASRWAKKWNIPLIVDPLISAYEKEVFERNKWSPESRKAEKRRLWEADLFSLADVVVADTPAHAE FFSETLGVNPRMLSVLYVSAETDFFKSASSERNPASGRHEILFYGSFLQLQGVDTIVQAAGIFPDMNVRWVLLGDGELKP AMEKAARRHKNIAFEPWIPYASLPSRIAQADILLGIFGSTKKAELVIPNKMFQAMAAGKPVITRYSKAYPPDMFASDVIG WVPCGDPASLAEKVREWIREPEKLAQRGEKTRELFDRFFSKEKMKEMLSNILSKASGENF
Sequences:
>Translated_380_residues MKEVFFQKSRPNIGFQRNLINSGEWCRMSSLLWWGRSDRDYSRNRIVLTLLSEMGFQIQYFHPRSSYTGFMEAHFHDFEK PDVIWVPCFRQKDILSASRWAKKWNIPLIVDPLISAYEKEVFERNKWSPESRKAEKRRLWEADLFSLADVVVADTPAHAE FFSETLGVNPRMLSVLYVSAETDFFKSASSERNPASGRHEILFYGSFLQLQGVDTIVQAAGIFPDMNVRWVLLGDGELKP AMEKAARRHKNIAFEPWIPYASLPSRIAQADILLGIFGSTKKAELVIPNKMFQAMAAGKPVITRYSKAYPPDMFASDVIG WVPCGDPASLAEKVREWIREPEKLAQRGEKTRELFDRFFSKEKMKEMLSNILSKASGENF >Mature_380_residues MKEVFFQKSRPNIGFQRNLINSGEWCRMSSLLWWGRSDRDYSRNRIVLTLLSEMGFQIQYFHPRSSYTGFMEAHFHDFEK PDVIWVPCFRQKDILSASRWAKKWNIPLIVDPLISAYEKEVFERNKWSPESRKAEKRRLWEADLFSLADVVVADTPAHAE FFSETLGVNPRMLSVLYVSAETDFFKSASSERNPASGRHEILFYGSFLQLQGVDTIVQAAGIFPDMNVRWVLLGDGELKP AMEKAARRHKNIAFEPWIPYASLPSRIAQADILLGIFGSTKKAELVIPNKMFQAMAAGKPVITRYSKAYPPDMFASDVIG WVPCGDPASLAEKVREWIREPEKLAQRGEKTRELFDRFFSKEKMKEMLSNILSKASGENF
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43758; Mature: 43758
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEVFFQKSRPNIGFQRNLINSGEWCRMSSLLWWGRSDRDYSRNRIVLTLLSEMGFQIQY CCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHEECCCCCCCCCCHHHEEEHHHHCCEEEE FHPRSSYTGFMEAHFHDFEKPDVIWVPCFRQKDILSASRWAKKWNIPLIVDPLISAYEKE ECCCCCCCCHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHH VFERNKWSPESRKAEKRRLWEADLFSLADVVVADTPAHAEFFSETLGVNPRMLSVLYVSA HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEEEEC ETDFFKSASSERNPASGRHEILFYGSFLQLQGVDTIVQAAGIFPDMNVRWVLLGDGELKP CCHHHHCCCCCCCCCCCCEEEEEEECEEEECCHHHHHHHHCCCCCCCEEEEEEECCCCCH AMEKAARRHKNIAFEPWIPYASLPSRIAQADILLGIFGSTKKAELVIPNKMFQAMAAGKP HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCEEEECCHHHHHHHHCCCH VITRYSKAYPPDMFASDVIGWVPCGDPASLAEKVREWIREPEKLAQRGEKTRELFDRFFS HHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHH KEKMKEMLSNILSKASGENF HHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKEVFFQKSRPNIGFQRNLINSGEWCRMSSLLWWGRSDRDYSRNRIVLTLLSEMGFQIQY CCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHEECCCCCCCCCCHHHEEEHHHHCCEEEE FHPRSSYTGFMEAHFHDFEKPDVIWVPCFRQKDILSASRWAKKWNIPLIVDPLISAYEKE ECCCCCCCCHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHH VFERNKWSPESRKAEKRRLWEADLFSLADVVVADTPAHAEFFSETLGVNPRMLSVLYVSA HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEEEEC ETDFFKSASSERNPASGRHEILFYGSFLQLQGVDTIVQAAGIFPDMNVRWVLLGDGELKP CCHHHHCCCCCCCCCCCCEEEEEEECEEEECCHHHHHHHHCCCCCCCEEEEEEECCCCCH AMEKAARRHKNIAFEPWIPYASLPSRIAQADILLGIFGSTKKAELVIPNKMFQAMAAGKP HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCEEEECCHHHHHHHHCCCH VITRYSKAYPPDMFASDVIGWVPCGDPASLAEKVREWIREPEKLAQRGEKTRELFDRFFS HHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHH KEKMKEMLSNILSKASGENF HHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA