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The map label for this gene is 85858687

Identifier: 85858687

GI number: 85858687

Start: 864320

End: 865507

Strand: Direct

Name: 85858687

Synonym: SYN_00880

Alternate gene names: NA

Gene position: 864320-865507 (Clockwise)

Preceding gene: 85858686

Following gene: 85858688

Centisome position: 27.19

GC content: 51.52

Gene sequence:

>1188_bases
GTGCCCGGTATCTGTCTCTGCTTTCAGGTTCATCGGCCCGTTATCTTGAAGCGCTATACGTTTTTTGATATCGGACGGCA
TCATCTTTATGAGGATCAGGAGGCAAATCGGCGAATTCTGAATCAGCTCGCGGATTCCTGCTATCTTCCGGCCAACAGAC
TTCTTCTGCGGCTTATGGAGAAGAGTGAAGGAAGATTCCGTGTGGCCTTTGCACTCAGCGGCGCCATGATCCATCTGTGT
GAAAAATACCGCCAGGATATTATGGAAGGCTTCCGGCGGCTGGCGGACACGGGTTGTGTCGAATTTCTCAATGAGGCCGA
TCCTCATTCCCTGGCCTTTCTTTTCTCTCCACGCGAATTTCGGGAACAGATCGAGGCGCACAAAAAAAAGATTCAGGAAC
TCTTTGGACAAAACCCCACGACCTTCCATTGCACGGATTTGATCTACAGCAATGAATTGGCGGGGGTTGCCGAAGAAATG
GGTCATTCAGCCTTCCTGGCCGAAGGCGGGCAGGGTCTTCCAGGTTTTCAGGGGCCCGACTTCGTTTATCAGCCTGCTGA
TTGCGCGCGTTTGAAATTACTCTTGAGAAATTATCACCTTTCTGCTGATATACGACTTCATTTTTCCGACGGGAGCCGAA
ATGGTCATCCGTTTCCGGCAGGATGGTTTGCCGAGAGGATCCTCCATTCCCTTGAAAACAGCGGTGGACAGGTGGTCAAT
CTGTTCCTGGACTATGAGACCTCTGGAAAATATCTGACGCCTGACAGGGGAAACTCTGAATTTCTGCAGGCCCTGTCGGC
TGAAATGCTTGGACAGCCCGATTTTCACTTCCAGCTTCCTGCGGAAATCGCGCAACGATACGATCCGCAGGCGCGACTGG
ATGTGACGGATTCTGCCTCCGGGTTCGATATACATCGGAATCTGACAACCGTGGCGGGAAATGCCATGCAGCAGGATGCC
CTCCGGGTGCTCTATGATCTGGAGGAAGCGGTCCGGAAGCGGAAGGACGCGGATTGCCTCGCCATCTGGCGGATGTTGCA
GACATCCGACTATTTTAATTATATGTGTACGGAAGGGTTTGCGGACAGGGTGAGACGACGCGATTCCGGTCCCTATGGGT
CACCTTATGAGTCCTATATCAACTATATGAATATTCTGGAAGATTTTTCCCGGACGCTTCAATCATAA

Upstream 100 bases:

>100_bases
AGAAATCAAGCGGATCCGCTGGCAAAATTCCGCGGCCAGGGTTATCGGCATCTATCGCCGGGTACTGGCCGCTGCCGGAC
CGACGTAAAGGAGTTTCTCT

Downstream 100 bases:

>100_bases
AAGGAGAAAGTGAATGGCAGAGAATCAGAACGGCTATCTCTTTGAATGCAGTTGGGAGGTATGCAATAAGGTTGGCGGCA
TCTATACGGTGATTACCAGC

Product: alpha-amylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MPGICLCFQVHRPVILKRYTFFDIGRHHLYEDQEANRRILNQLADSCYLPANRLLLRLMEKSEGRFRVAFALSGAMIHLC
EKYRQDIMEGFRRLADTGCVEFLNEADPHSLAFLFSPREFREQIEAHKKKIQELFGQNPTTFHCTDLIYSNELAGVAEEM
GHSAFLAEGGQGLPGFQGPDFVYQPADCARLKLLLRNYHLSADIRLHFSDGSRNGHPFPAGWFAERILHSLENSGGQVVN
LFLDYETSGKYLTPDRGNSEFLQALSAEMLGQPDFHFQLPAEIAQRYDPQARLDVTDSASGFDIHRNLTTVAGNAMQQDA
LRVLYDLEEAVRKRKDADCLAIWRMLQTSDYFNYMCTEGFADRVRRRDSGPYGSPYESYINYMNILEDFSRTLQS

Sequences:

>Translated_395_residues
MPGICLCFQVHRPVILKRYTFFDIGRHHLYEDQEANRRILNQLADSCYLPANRLLLRLMEKSEGRFRVAFALSGAMIHLC
EKYRQDIMEGFRRLADTGCVEFLNEADPHSLAFLFSPREFREQIEAHKKKIQELFGQNPTTFHCTDLIYSNELAGVAEEM
GHSAFLAEGGQGLPGFQGPDFVYQPADCARLKLLLRNYHLSADIRLHFSDGSRNGHPFPAGWFAERILHSLENSGGQVVN
LFLDYETSGKYLTPDRGNSEFLQALSAEMLGQPDFHFQLPAEIAQRYDPQARLDVTDSASGFDIHRNLTTVAGNAMQQDA
LRVLYDLEEAVRKRKDADCLAIWRMLQTSDYFNYMCTEGFADRVRRRDSGPYGSPYESYINYMNILEDFSRTLQS
>Mature_394_residues
PGICLCFQVHRPVILKRYTFFDIGRHHLYEDQEANRRILNQLADSCYLPANRLLLRLMEKSEGRFRVAFALSGAMIHLCE
KYRQDIMEGFRRLADTGCVEFLNEADPHSLAFLFSPREFREQIEAHKKKIQELFGQNPTTFHCTDLIYSNELAGVAEEMG
HSAFLAEGGQGLPGFQGPDFVYQPADCARLKLLLRNYHLSADIRLHFSDGSRNGHPFPAGWFAERILHSLENSGGQVVNL
FLDYETSGKYLTPDRGNSEFLQALSAEMLGQPDFHFQLPAEIAQRYDPQARLDVTDSASGFDIHRNLTTVAGNAMQQDAL
RVLYDLEEAVRKRKDADCLAIWRMLQTSDYFNYMCTEGFADRVRRRDSGPYGSPYESYINYMNILEDFSRTLQS

Specific function: Unknown

COG id: COG1449

COG function: function code G; Alpha-amylase/alpha-mannosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 57 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR004300 [H]

Pfam domain/function: PF03065 Glyco_hydro_57 [H]

EC number: =3.2.1.1 [H]

Molecular weight: Translated: 45273; Mature: 45141

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGICLCFQVHRPVILKRYTFFDIGRHHLYEDQEANRRILNQLADSCYLPANRLLLRLME
CCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
KSEGRFRVAFALSGAMIHLCEKYRQDIMEGFRRLADTGCVEFLNEADPHSLAFLFSPREF
CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHH
REQIEAHKKKIQELFGQNPTTFHCTDLIYSNELAGVAEEMGHSAFLAEGGQGLPGFQGPD
HHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCC
FVYQPADCARLKLLLRNYHLSADIRLHFSDGSRNGHPFPAGWFAERILHSLENSGGQVVN
CCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
LFLDYETSGKYLTPDRGNSEFLQALSAEMLGQPDFHFQLPAEIAQRYDPQARLDVTDSAS
EEEEECCCCCEECCCCCCHHHHHHHHHHHCCCCCCCEECCHHHHHCCCCCCEEEECCCCC
GFDIHRNLTTVAGNAMQQDALRVLYDLEEAVRKRKDADCLAIWRMLQTSDYFNYMCTEGF
CCCHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ADRVRRRDSGPYGSPYESYINYMNILEDFSRTLQS
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PGICLCFQVHRPVILKRYTFFDIGRHHLYEDQEANRRILNQLADSCYLPANRLLLRLME
CCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
KSEGRFRVAFALSGAMIHLCEKYRQDIMEGFRRLADTGCVEFLNEADPHSLAFLFSPREF
CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHH
REQIEAHKKKIQELFGQNPTTFHCTDLIYSNELAGVAEEMGHSAFLAEGGQGLPGFQGPD
HHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCC
FVYQPADCARLKLLLRNYHLSADIRLHFSDGSRNGHPFPAGWFAERILHSLENSGGQVVN
CCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
LFLDYETSGKYLTPDRGNSEFLQALSAEMLGQPDFHFQLPAEIAQRYDPQARLDVTDSAS
EEEEECCCCCEECCCCCCHHHHHHHHHHHCCCCCCCEECCHHHHHCCCCCCEEEECCCCC
GFDIHRNLTTVAGNAMQQDALRVLYDLEEAVRKRKDADCLAIWRMLQTSDYFNYMCTEGF
CCCHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ADRVRRRDSGPYGSPYESYINYMNILEDFSRTLQS
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]