Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85858629

Identifier: 85858629

GI number: 85858629

Start: 796510

End: 797733

Strand: Direct

Name: 85858629

Synonym: SYN_01575

Alternate gene names: NA

Gene position: 796510-797733 (Clockwise)

Preceding gene: 85858627

Following gene: 85858632

Centisome position: 25.05

GC content: 54.17

Gene sequence:

>1224_bases
TTGCTGCGTGAGGGTGCAAAGGGATTAAGAGGCTGCCACCGATGGTTGTTGGATCCCGCGGCTACAGCCGGCATGGCGGG
GATTGCCGGGGCCGGGGCAATTTTGCCGCGTTTTCCCGCGCTCATCCCCGCGGATTCAGAGACCCTTTTGCCGAATCTGT
GTGAAATGCCGGAAAATAACAGCTGCTCATTGCCAATGCCCTTGAAAAGAATTAAAATTATGGACAAAGAAGCCGGGGGT
CCTGAAATGGAAAAAAAGTGTTCGGAGTTTCTGAATCGGTATAACATTTCCGAGGAAGCTTATGCCGCTGCAGGGATCGC
CTGGGATGAGCTCGAAGAAGTAAGGGATCATTATATCCAGACCCGGGATGAACTGGAGCCGACGGCGCGATACATCGTCA
ATATTCTCAATAAAACTGAAAAGGTCCATTCCGTCAGTTACCGCATCAAGGCCCCTGAACACCTGATAGCGAAAATTATC
CGCAAGAGAATCGGGAAGCCGGAAGGGATTATCAATCTCGCAAACTACAGACAGAAGATCACCGATCTGATCGGGATACG
GGTCCTGCATCTCTTCAAGGAAGACTGGCTGGATCTTCACCAGTTCATCACCCGCACCTGGAATCTGAGGAAAGAGCCCA
TCGCCTATGTGCGCCGGGGCGATGCGGCGGGATACATCAACAGTTTCAAGAACTGGGGCTGCACGATCAAGGAACACCCG
TACGGCTATCGATCCGTTCATTACCTCCTGCAGTCCATGATTTCGGAGTCGGCGGAGCCGACGGTCCAGGTATCGGAAGT
GCAGGTCCGGACCCTGTTCGAAGAGGCCTGGAGCAGCATCGATCATCATGTCCGTTATCCTTACGAACCCCGCAATGTCC
TGCTCAATGAACTGCTCGTTATTCTGAACCGTCTTTCGGGCAGCGCCGATGAAATGGCTTCCTGTATCCTTTATCTGAAA
GAAAAGATCAATACGCCAGGCATGCCGTCACAAGATGTAAACGGGCAAGCCGGGCAGGGCGGCGGATTCTTTCAGCCCCT
GGATGAGTTTGAATGGCCCGCGGAAACGGGGTCGGGAGTCATGGCCTGGACGGACGGGAATATCGGGGAGGGCCTTCCGG
AACCGTACCTTTTCCCCCCGGCCGATATGGCTGATCAGGAAAAGGGACCCGGCGAAGAGGGGCCTGAAAAGTCAGAAAAG
CCGTCCTCTTCAGCGGAACGCTGA

Upstream 100 bases:

>100_bases
CCGCTTTTCGGATGAACATCGGTTAATATTTTTTTATGCTACCCTGAAAGTGAGTATTTTTCAATAGATAATCTGGAACA
TTTTCTCCTGTCAGGTACTT

Downstream 100 bases:

>100_bases
AGCCCTTTTCCCTGAGCTTCAGCGTTGACTGGTCTGCGTGACTCGTCGTCTGCGTGCGGCAAAGGGCAAAAATCCGGTCT
GCGGAAGCCGTCAGTGCCTT

Product: relA / spoT related protein

Products: AMP; guanosine 3'-diphosphate 5'-triphosphate

Alternate protein names: RelA/SpoT Domain-Containing Protein; RelA/SpoT Domain Protein; GTP Pyrophosphokinase-Like Protein; RelA / SpoT Related Protein

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MLREGAKGLRGCHRWLLDPAATAGMAGIAGAGAILPRFPALIPADSETLLPNLCEMPENNSCSLPMPLKRIKIMDKEAGG
PEMEKKCSEFLNRYNISEEAYAAAGIAWDELEEVRDHYIQTRDELEPTARYIVNILNKTEKVHSVSYRIKAPEHLIAKII
RKRIGKPEGIINLANYRQKITDLIGIRVLHLFKEDWLDLHQFITRTWNLRKEPIAYVRRGDAAGYINSFKNWGCTIKEHP
YGYRSVHYLLQSMISESAEPTVQVSEVQVRTLFEEAWSSIDHHVRYPYEPRNVLLNELLVILNRLSGSADEMASCILYLK
EKINTPGMPSQDVNGQAGQGGGFFQPLDEFEWPAETGSGVMAWTDGNIGEGLPEPYLFPPADMADQEKGPGEEGPEKSEK
PSSSAER

Sequences:

>Translated_407_residues
MLREGAKGLRGCHRWLLDPAATAGMAGIAGAGAILPRFPALIPADSETLLPNLCEMPENNSCSLPMPLKRIKIMDKEAGG
PEMEKKCSEFLNRYNISEEAYAAAGIAWDELEEVRDHYIQTRDELEPTARYIVNILNKTEKVHSVSYRIKAPEHLIAKII
RKRIGKPEGIINLANYRQKITDLIGIRVLHLFKEDWLDLHQFITRTWNLRKEPIAYVRRGDAAGYINSFKNWGCTIKEHP
YGYRSVHYLLQSMISESAEPTVQVSEVQVRTLFEEAWSSIDHHVRYPYEPRNVLLNELLVILNRLSGSADEMASCILYLK
EKINTPGMPSQDVNGQAGQGGGFFQPLDEFEWPAETGSGVMAWTDGNIGEGLPEPYLFPPADMADQEKGPGEEGPEKSEK
PSSSAER
>Mature_407_residues
MLREGAKGLRGCHRWLLDPAATAGMAGIAGAGAILPRFPALIPADSETLLPNLCEMPENNSCSLPMPLKRIKIMDKEAGG
PEMEKKCSEFLNRYNISEEAYAAAGIAWDELEEVRDHYIQTRDELEPTARYIVNILNKTEKVHSVSYRIKAPEHLIAKII
RKRIGKPEGIINLANYRQKITDLIGIRVLHLFKEDWLDLHQFITRTWNLRKEPIAYVRRGDAAGYINSFKNWGCTIKEHP
YGYRSVHYLLQSMISESAEPTVQVSEVQVRTLFEEAWSSIDHHVRYPYEPRNVLLNELLVILNRLSGSADEMASCILYLK
EKINTPGMPSQDVNGQAGQGGGFFQPLDEFEWPAETGSGVMAWTDGNIGEGLPEPYLFPPADMADQEKGPGEEGPEKSEK
PSSSAER

Specific function: Unknown

COG id: COG2357

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.6.5

Molecular weight: Translated: 45707; Mature: 45707

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLREGAKGLRGCHRWLLDPAATAGMAGIAGAGAILPRFPALIPADSETLLPNLCEMPENN
CCCCCHHHHHHHHHHHHCHHHHHCHHHHHHCCHHHHHCCCCCCCCCHHHCCHHHCCCCCC
SCSLPMPLKRIKIMDKEAGGPEMEKKCSEFLNRYNISEEAYAAAGIAWDELEEVRDHYIQ
CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHH
TRDELEPTARYIVNILNKTEKVHSVSYRIKAPEHLIAKIIRKRIGKPEGIINLANYRQKI
HHHHCCHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHCCCCCCEEEHHHHHHHH
TDLIGIRVLHLFKEDWLDLHQFITRTWNLRKEPIAYVRRGDAAGYINSFKNWGCTIKEHP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCCEECCCC
YGYRSVHYLLQSMISESAEPTVQVSEVQVRTLFEEAWSSIDHHVRYPYEPRNVLLNELLV
CCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
ILNRLSGSADEMASCILYLKEKINTPGMPSQDVNGQAGQGGGFFQPLDEFEWPAETGSGV
HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCE
MAWTDGNIGEGLPEPYLFPPADMADQEKGPGEEGPEKSEKPSSSAER
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLREGAKGLRGCHRWLLDPAATAGMAGIAGAGAILPRFPALIPADSETLLPNLCEMPENN
CCCCCHHHHHHHHHHHHCHHHHHCHHHHHHCCHHHHHCCCCCCCCCHHHCCHHHCCCCCC
SCSLPMPLKRIKIMDKEAGGPEMEKKCSEFLNRYNISEEAYAAAGIAWDELEEVRDHYIQ
CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHH
TRDELEPTARYIVNILNKTEKVHSVSYRIKAPEHLIAKIIRKRIGKPEGIINLANYRQKI
HHHHCCHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHCCCCCCEEEHHHHHHHH
TDLIGIRVLHLFKEDWLDLHQFITRTWNLRKEPIAYVRRGDAAGYINSFKNWGCTIKEHP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCCEECCCC
YGYRSVHYLLQSMISESAEPTVQVSEVQVRTLFEEAWSSIDHHVRYPYEPRNVLLNELLV
CCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
ILNRLSGSADEMASCILYLKEKINTPGMPSQDVNGQAGQGGGFFQPLDEFEWPAETGSGV
HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCE
MAWTDGNIGEGLPEPYLFPPADMADQEKGPGEEGPEKSEKPSSSAER
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; GTP

Specific reaction: ATP + GTP = AMP + guanosine 3'-diphosphate 5'-triphosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA