| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858629
Identifier: 85858629
GI number: 85858629
Start: 796510
End: 797733
Strand: Direct
Name: 85858629
Synonym: SYN_01575
Alternate gene names: NA
Gene position: 796510-797733 (Clockwise)
Preceding gene: 85858627
Following gene: 85858632
Centisome position: 25.05
GC content: 54.17
Gene sequence:
>1224_bases TTGCTGCGTGAGGGTGCAAAGGGATTAAGAGGCTGCCACCGATGGTTGTTGGATCCCGCGGCTACAGCCGGCATGGCGGG GATTGCCGGGGCCGGGGCAATTTTGCCGCGTTTTCCCGCGCTCATCCCCGCGGATTCAGAGACCCTTTTGCCGAATCTGT GTGAAATGCCGGAAAATAACAGCTGCTCATTGCCAATGCCCTTGAAAAGAATTAAAATTATGGACAAAGAAGCCGGGGGT CCTGAAATGGAAAAAAAGTGTTCGGAGTTTCTGAATCGGTATAACATTTCCGAGGAAGCTTATGCCGCTGCAGGGATCGC CTGGGATGAGCTCGAAGAAGTAAGGGATCATTATATCCAGACCCGGGATGAACTGGAGCCGACGGCGCGATACATCGTCA ATATTCTCAATAAAACTGAAAAGGTCCATTCCGTCAGTTACCGCATCAAGGCCCCTGAACACCTGATAGCGAAAATTATC CGCAAGAGAATCGGGAAGCCGGAAGGGATTATCAATCTCGCAAACTACAGACAGAAGATCACCGATCTGATCGGGATACG GGTCCTGCATCTCTTCAAGGAAGACTGGCTGGATCTTCACCAGTTCATCACCCGCACCTGGAATCTGAGGAAAGAGCCCA TCGCCTATGTGCGCCGGGGCGATGCGGCGGGATACATCAACAGTTTCAAGAACTGGGGCTGCACGATCAAGGAACACCCG TACGGCTATCGATCCGTTCATTACCTCCTGCAGTCCATGATTTCGGAGTCGGCGGAGCCGACGGTCCAGGTATCGGAAGT GCAGGTCCGGACCCTGTTCGAAGAGGCCTGGAGCAGCATCGATCATCATGTCCGTTATCCTTACGAACCCCGCAATGTCC TGCTCAATGAACTGCTCGTTATTCTGAACCGTCTTTCGGGCAGCGCCGATGAAATGGCTTCCTGTATCCTTTATCTGAAA GAAAAGATCAATACGCCAGGCATGCCGTCACAAGATGTAAACGGGCAAGCCGGGCAGGGCGGCGGATTCTTTCAGCCCCT GGATGAGTTTGAATGGCCCGCGGAAACGGGGTCGGGAGTCATGGCCTGGACGGACGGGAATATCGGGGAGGGCCTTCCGG AACCGTACCTTTTCCCCCCGGCCGATATGGCTGATCAGGAAAAGGGACCCGGCGAAGAGGGGCCTGAAAAGTCAGAAAAG CCGTCCTCTTCAGCGGAACGCTGA
Upstream 100 bases:
>100_bases CCGCTTTTCGGATGAACATCGGTTAATATTTTTTTATGCTACCCTGAAAGTGAGTATTTTTCAATAGATAATCTGGAACA TTTTCTCCTGTCAGGTACTT
Downstream 100 bases:
>100_bases AGCCCTTTTCCCTGAGCTTCAGCGTTGACTGGTCTGCGTGACTCGTCGTCTGCGTGCGGCAAAGGGCAAAAATCCGGTCT GCGGAAGCCGTCAGTGCCTT
Product: relA / spoT related protein
Products: AMP; guanosine 3'-diphosphate 5'-triphosphate
Alternate protein names: RelA/SpoT Domain-Containing Protein; RelA/SpoT Domain Protein; GTP Pyrophosphokinase-Like Protein; RelA / SpoT Related Protein
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MLREGAKGLRGCHRWLLDPAATAGMAGIAGAGAILPRFPALIPADSETLLPNLCEMPENNSCSLPMPLKRIKIMDKEAGG PEMEKKCSEFLNRYNISEEAYAAAGIAWDELEEVRDHYIQTRDELEPTARYIVNILNKTEKVHSVSYRIKAPEHLIAKII RKRIGKPEGIINLANYRQKITDLIGIRVLHLFKEDWLDLHQFITRTWNLRKEPIAYVRRGDAAGYINSFKNWGCTIKEHP YGYRSVHYLLQSMISESAEPTVQVSEVQVRTLFEEAWSSIDHHVRYPYEPRNVLLNELLVILNRLSGSADEMASCILYLK EKINTPGMPSQDVNGQAGQGGGFFQPLDEFEWPAETGSGVMAWTDGNIGEGLPEPYLFPPADMADQEKGPGEEGPEKSEK PSSSAER
Sequences:
>Translated_407_residues MLREGAKGLRGCHRWLLDPAATAGMAGIAGAGAILPRFPALIPADSETLLPNLCEMPENNSCSLPMPLKRIKIMDKEAGG PEMEKKCSEFLNRYNISEEAYAAAGIAWDELEEVRDHYIQTRDELEPTARYIVNILNKTEKVHSVSYRIKAPEHLIAKII RKRIGKPEGIINLANYRQKITDLIGIRVLHLFKEDWLDLHQFITRTWNLRKEPIAYVRRGDAAGYINSFKNWGCTIKEHP YGYRSVHYLLQSMISESAEPTVQVSEVQVRTLFEEAWSSIDHHVRYPYEPRNVLLNELLVILNRLSGSADEMASCILYLK EKINTPGMPSQDVNGQAGQGGGFFQPLDEFEWPAETGSGVMAWTDGNIGEGLPEPYLFPPADMADQEKGPGEEGPEKSEK PSSSAER >Mature_407_residues MLREGAKGLRGCHRWLLDPAATAGMAGIAGAGAILPRFPALIPADSETLLPNLCEMPENNSCSLPMPLKRIKIMDKEAGG PEMEKKCSEFLNRYNISEEAYAAAGIAWDELEEVRDHYIQTRDELEPTARYIVNILNKTEKVHSVSYRIKAPEHLIAKII RKRIGKPEGIINLANYRQKITDLIGIRVLHLFKEDWLDLHQFITRTWNLRKEPIAYVRRGDAAGYINSFKNWGCTIKEHP YGYRSVHYLLQSMISESAEPTVQVSEVQVRTLFEEAWSSIDHHVRYPYEPRNVLLNELLVILNRLSGSADEMASCILYLK EKINTPGMPSQDVNGQAGQGGGFFQPLDEFEWPAETGSGVMAWTDGNIGEGLPEPYLFPPADMADQEKGPGEEGPEKSEK PSSSAER
Specific function: Unknown
COG id: COG2357
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.6.5
Molecular weight: Translated: 45707; Mature: 45707
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLREGAKGLRGCHRWLLDPAATAGMAGIAGAGAILPRFPALIPADSETLLPNLCEMPENN CCCCCHHHHHHHHHHHHCHHHHHCHHHHHHCCHHHHHCCCCCCCCCHHHCCHHHCCCCCC SCSLPMPLKRIKIMDKEAGGPEMEKKCSEFLNRYNISEEAYAAAGIAWDELEEVRDHYIQ CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHH TRDELEPTARYIVNILNKTEKVHSVSYRIKAPEHLIAKIIRKRIGKPEGIINLANYRQKI HHHHCCHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHCCCCCCEEEHHHHHHHH TDLIGIRVLHLFKEDWLDLHQFITRTWNLRKEPIAYVRRGDAAGYINSFKNWGCTIKEHP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCCEECCCC YGYRSVHYLLQSMISESAEPTVQVSEVQVRTLFEEAWSSIDHHVRYPYEPRNVLLNELLV CCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH ILNRLSGSADEMASCILYLKEKINTPGMPSQDVNGQAGQGGGFFQPLDEFEWPAETGSGV HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCE MAWTDGNIGEGLPEPYLFPPADMADQEKGPGEEGPEKSEKPSSSAER EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLREGAKGLRGCHRWLLDPAATAGMAGIAGAGAILPRFPALIPADSETLLPNLCEMPENN CCCCCHHHHHHHHHHHHCHHHHHCHHHHHHCCHHHHHCCCCCCCCCHHHCCHHHCCCCCC SCSLPMPLKRIKIMDKEAGGPEMEKKCSEFLNRYNISEEAYAAAGIAWDELEEVRDHYIQ CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHH TRDELEPTARYIVNILNKTEKVHSVSYRIKAPEHLIAKIIRKRIGKPEGIINLANYRQKI HHHHCCHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHCCCCCCEEEHHHHHHHH TDLIGIRVLHLFKEDWLDLHQFITRTWNLRKEPIAYVRRGDAAGYINSFKNWGCTIKEHP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCCEECCCC YGYRSVHYLLQSMISESAEPTVQVSEVQVRTLFEEAWSSIDHHVRYPYEPRNVLLNELLV CCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH ILNRLSGSADEMASCILYLKEKINTPGMPSQDVNGQAGQGGGFFQPLDEFEWPAETGSGV HHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCE MAWTDGNIGEGLPEPYLFPPADMADQEKGPGEEGPEKSEKPSSSAER EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; GTP
Specific reaction: ATP + GTP = AMP + guanosine 3'-diphosphate 5'-triphosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA