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The map label for this gene is yebC [C]

Identifier: 85858584

GI number: 85858584

Start: 746242

End: 746994

Strand: Direct

Name: yebC [C]

Synonym: SYN_02974

Alternate gene names: 85858584

Gene position: 746242-746994 (Clockwise)

Preceding gene: 85858583

Following gene: 85858585

Centisome position: 23.47

GC content: 39.97

Gene sequence:

>753_bases
ATGTCAGGTCATTCAAAATGGAGTACAATCAAAAGAAAAAAAGGTGCTATTGATTCAAAGAGAGGAAAGATATTTACTAA
AATCATTAAAGAAATTACTTTGGCTGCAAGATTGGGAGGGGGAGACACTGAAGGAAACTCCAGACTGAGGCAGGCCATTC
TGGCAGCCAAGAATGAAAATATGCCGAGGGATAATATAGACAGAGCGATAAAAAAAGGGACCGGAGAGATAGGGGGAGGC
GAAAGTTACGAAGAAGTTACATATGAAGGATATGGACCCGGCGGAGTTGCCGTTCTCGTTGAGGTCATGACAGATAATAA
AAATAGGACCGTTGCTGAAATCAGGCATATATTTTCAAAGCACGGTGGCAATCTTGGGGGGAATGGATGTGTGTCATGGT
TGTTTGAAAAAAAAGGAAGCATCGTGTTTGATAGGGATTTAATCGATGAAGATGCATTGATGGAATTAGCCCTGGAAGCG
GGAGCTGAAGATATTCGTGAAGAAGAAAGCCAAATGGATGTGATAACAGACCCATCAATGTTTGATAAAGTAAGAGATGT
ATTGGAAGGAAAGGGCATGAAATATGTTCAGGCTTCCATCGAAATGGTACCTCAAAATACAATAAGATTGGATGAGGGGA
AAGCCGAACAGATGCTGAAAATGATCGAAAAATTAGAAGACAATGACGATGTTCAGAATGTCTATGCAAATTTCGATATA
CCAGATGAGATTATGGAAAAATTAAGTGCATAG

Upstream 100 bases:

>100_bases
TTATCACGACCATCTCTGTGAACAAGATGATAGGCTCCCTTAAATTTGTGCGAAGGTTGAGATGTTTATAAAAGATTCTG
TAGAAAAAGGAGAAGAATGA

Downstream 100 bases:

>100_bases
GTTATAAATAGCAGCTTTGATAATGTGCCTTCATTAAAAATTGTGGTTTATTATCAATAAAGAGCAATAAAAATCTTTAA
AGATAATGCAAAAGCATCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MSGHSKWSTIKRKKGAIDSKRGKIFTKIIKEITLAARLGGGDTEGNSRLRQAILAAKNENMPRDNIDRAIKKGTGEIGGG
ESYEEVTYEGYGPGGVAVLVEVMTDNKNRTVAEIRHIFSKHGGNLGGNGCVSWLFEKKGSIVFDRDLIDEDALMELALEA
GAEDIREEESQMDVITDPSMFDKVRDVLEGKGMKYVQASIEMVPQNTIRLDEGKAEQMLKMIEKLEDNDDVQNVYANFDI
PDEIMEKLSA

Sequences:

>Translated_250_residues
MSGHSKWSTIKRKKGAIDSKRGKIFTKIIKEITLAARLGGGDTEGNSRLRQAILAAKNENMPRDNIDRAIKKGTGEIGGG
ESYEEVTYEGYGPGGVAVLVEVMTDNKNRTVAEIRHIFSKHGGNLGGNGCVSWLFEKKGSIVFDRDLIDEDALMELALEA
GAEDIREEESQMDVITDPSMFDKVRDVLEGKGMKYVQASIEMVPQNTIRLDEGKAEQMLKMIEKLEDNDDVQNVYANFDI
PDEIMEKLSA
>Mature_249_residues
SGHSKWSTIKRKKGAIDSKRGKIFTKIIKEITLAARLGGGDTEGNSRLRQAILAAKNENMPRDNIDRAIKKGTGEIGGGE
SYEEVTYEGYGPGGVAVLVEVMTDNKNRTVAEIRHIFSKHGGNLGGNGCVSWLFEKKGSIVFDRDLIDEDALMELALEAG
AEDIREEESQMDVITDPSMFDKVRDVLEGKGMKYVQASIEMVPQNTIRLDEGKAEQMLKMIEKLEDNDDVQNVYANFDIP
DEIMEKLSA

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=248, Percent_Identity=33.0645161290323, Blast_Score=146, Evalue=1e-35,
Organism=Escherichia coli, GI1788171, Length=251, Percent_Identity=49.800796812749, Blast_Score=246, Evalue=8e-67,
Organism=Escherichia coli, GI1788294, Length=235, Percent_Identity=38.7234042553192, Blast_Score=154, Evalue=5e-39,
Organism=Caenorhabditis elegans, GI17556100, Length=250, Percent_Identity=27.2, Blast_Score=84, Evalue=8e-17,
Organism=Saccharomyces cerevisiae, GI6321458, Length=268, Percent_Identity=33.5820895522388, Blast_Score=117, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24583305, Length=249, Percent_Identity=26.1044176706827, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y739_SYNAS (Q2LRB1)

Other databases:

- EMBL:   CP000252
- RefSeq:   YP_460786.1
- ProteinModelPortal:   Q2LRB1
- SMR:   Q2LRB1
- STRING:   Q2LRB1
- GeneID:   3885052
- GenomeReviews:   CP000252_GR
- KEGG:   sat:SYN_02974
- NMPDR:   fig|56780.10.peg.727
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- PhylomeDB:   Q2LRB1
- ProtClustDB:   PRK00110
- BioCyc:   SACI56780:SYN_02974-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 27689; Mature: 27558

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHSKWSTIKRKKGAIDSKRGKIFTKIIKEITLAARLGGGDTEGNSRLRQAILAAKNEN
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
MPRDNIDRAIKKGTGEIGGGESYEEVTYEGYGPGGVAVLVEVMTDNKNRTVAEIRHIFSK
CCHHHHHHHHHHCCCCCCCCCCHHHCEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
HGGNLGGNGCVSWLFEKKGSIVFDRDLIDEDALMELALEAGAEDIREEESQMDVITDPSM
CCCCCCCHHHHHHHHHCCCCEEEEHHHCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHH
FDKVRDVLEGKGMKYVQASIEMVPQNTIRLDEGKAEQMLKMIEKLEDNDDVQNVYANFDI
HHHHHHHHHCCCCHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHCCCCCHHHHHCCCCC
PDEIMEKLSA
CHHHHHHHCC
>Mature Secondary Structure 
SGHSKWSTIKRKKGAIDSKRGKIFTKIIKEITLAARLGGGDTEGNSRLRQAILAAKNEN
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC
MPRDNIDRAIKKGTGEIGGGESYEEVTYEGYGPGGVAVLVEVMTDNKNRTVAEIRHIFSK
CCHHHHHHHHHHCCCCCCCCCCHHHCEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHH
HGGNLGGNGCVSWLFEKKGSIVFDRDLIDEDALMELALEAGAEDIREEESQMDVITDPSM
CCCCCCCHHHHHHHHHCCCCEEEEHHHCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCHH
FDKVRDVLEGKGMKYVQASIEMVPQNTIRLDEGKAEQMLKMIEKLEDNDDVQNVYANFDI
HHHHHHHHHCCCCHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHCCCCCHHHHHCCCCC
PDEIMEKLSA
CHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA