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The map label for this gene is ykfC [C]

Identifier: 85858581

GI number: 85858581

Start: 744605

End: 745543

Strand: Direct

Name: ykfC [C]

Synonym: SYN_02976

Alternate gene names: 85858581

Gene position: 744605-745543 (Clockwise)

Preceding gene: 85858579

Following gene: 85858582

Centisome position: 23.42

GC content: 46.75

Gene sequence:

>939_bases
TTGGCCACTCGGCAAGATTTTGGGCCAACTGAAAATCAGGAAGAGCCGGTGAAATCAGCAAAGTCATCTGACATATCCAA
ACACTTGGTATGGGAAGCCAACCGGGACTTGAAAACTAGAGGAGATGCAGCAGGCATAGATAAAGAATCGATTGATGTGT
TCGTGGTTAATCTGAAGGATAATCTGTATCGGTTATGGAATCGAAGGTCATCGGGAAGTTACTTCCCGCCATCGGTCAGG
GCGGTACCGATACCTAAGAAAACAGGAGGAACGTGGATACTGGGTGTACCGACTGTTTCGGATCGGATTGCTCAGTCCGT
GGTGAAGAGGGTGCTGGAAGCGATACTTGATCAAATATTTGATCAAGATCAATTTGGCTACCGGGCTGGCAAGTCTGCTC
ATGATGCTATTGCCAAAACGCGTCAACGCTGCTGGTTTTATGACTGGGTTGTAGAGTTCGACATTAACCCGGAAAAATCC
CGGATGGTGTACTGTAAGGATAGGAATAGCTCCGAGGAGCATGACGTGATCAACTTCGACTTTTTGGGCTTCATGTTACG
CCCGCAACGGTGCTTATCCGAAAGTCATTGTATCCATGCGAATTTTCTTCCGGCAATCAGCCGATCATCCAGGAAAGAAA
TCAATCGGGAAATTTGCAGGCGGCATATCCAGTTAAAGAACGACAAAACACTCGATGATTTGTCGAACATGTTCAAGGCG
AAGATCCGCGGTTGGATCGCTTATTACGGTCGATTCTATCCAAGCGAAATCGGCTGGATTTGGAAGAACATCAACGGCTA
TCTGATTCGTTGTGTACGTCGTAAATATAAACGTTTTGCCTCCCACAAAAAGCAGGCGCGTTGTTATTTGCGACAACTTG
CCCAGGGAAATCAAAGGCTTTTCATTCACTGGGAGCTTGGATGCTGCCATATGGCTTGA

Upstream 100 bases:

>100_bases
CACAAGCGGATAAACCGTGAAGCAGATAGTATCGATGCGCGGCAAAAGGGCGGACAAGTCCGTAGTAGTGATGAAACTTC
TGTAATGGGAGCGAAGGGAC

Downstream 100 bases:

>100_bases
GTGGTAGAAGCCGGATGAGAGCTGAGAGGTTCACGTCCGGTTCTCGGAGGGGCTTGGGGTTAAAGTCCCACGGTCTACTC
AACCATATATTCTAATGGCC

Product: reverse transcriptase

Products: NA

Alternate protein names: Reverse Transcriptase; Reverse Transcriptase/Maturase; Retron-Type Reverse Transcriptase; Maturase; Reverse Transcriptase/Maturase Family Protein; Reverse Transcriptase/Maturase Protein; Group II Intron-Encoding Maturase; Recombinase; Group II Intron-Encoded Protein LtrA; Reverse Transcriptase Family Protein; Transposase; CRISPR-Associated Protein; Retron-Type Reverse Transcriptase C-Terminal Half; GBSi1 Group II Intron Maturase; Retron-Type Reverse Transcriptase-Like Protein; Ecombinase For Bh.Int; Group II Intron-Encoded Maturase; Reverse Transcriptase Fragment; Ecombinase Of Bh.Int-Like Element; Integron/Retron-Type RNA-Directed DNA Polymerase; Group II Intron-Encoded Protein; Reverse Transcriptase/Retron Type; Phage Reverse Transcriptase/Maturase Protein; Reverse Transcriptase-Like Protein; Reverse Transcriptasematurase Protein; Group II Intron Reverse Transcriptase/Maturase

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MATRQDFGPTENQEEPVKSAKSSDISKHLVWEANRDLKTRGDAAGIDKESIDVFVVNLKDNLYRLWNRRSSGSYFPPSVR
AVPIPKKTGGTWILGVPTVSDRIAQSVVKRVLEAILDQIFDQDQFGYRAGKSAHDAIAKTRQRCWFYDWVVEFDINPEKS
RMVYCKDRNSSEEHDVINFDFLGFMLRPQRCLSESHCIHANFLPAISRSSRKEINREICRRHIQLKNDKTLDDLSNMFKA
KIRGWIAYYGRFYPSEIGWIWKNINGYLIRCVRRKYKRFASHKKQARCYLRQLAQGNQRLFIHWELGCCHMA

Sequences:

>Translated_312_residues
MATRQDFGPTENQEEPVKSAKSSDISKHLVWEANRDLKTRGDAAGIDKESIDVFVVNLKDNLYRLWNRRSSGSYFPPSVR
AVPIPKKTGGTWILGVPTVSDRIAQSVVKRVLEAILDQIFDQDQFGYRAGKSAHDAIAKTRQRCWFYDWVVEFDINPEKS
RMVYCKDRNSSEEHDVINFDFLGFMLRPQRCLSESHCIHANFLPAISRSSRKEINREICRRHIQLKNDKTLDDLSNMFKA
KIRGWIAYYGRFYPSEIGWIWKNINGYLIRCVRRKYKRFASHKKQARCYLRQLAQGNQRLFIHWELGCCHMA
>Mature_311_residues
ATRQDFGPTENQEEPVKSAKSSDISKHLVWEANRDLKTRGDAAGIDKESIDVFVVNLKDNLYRLWNRRSSGSYFPPSVRA
VPIPKKTGGTWILGVPTVSDRIAQSVVKRVLEAILDQIFDQDQFGYRAGKSAHDAIAKTRQRCWFYDWVVEFDINPEKSR
MVYCKDRNSSEEHDVINFDFLGFMLRPQRCLSESHCIHANFLPAISRSSRKEINREICRRHIQLKNDKTLDDLSNMFKAK
IRGWIAYYGRFYPSEIGWIWKNINGYLIRCVRRKYKRFASHKKQARCYLRQLAQGNQRLFIHWELGCCHMA

Specific function: Unknown

COG id: COG3344

COG function: function code L; Retron-type reverse transcriptase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36530; Mature: 36399

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATRQDFGPTENQEEPVKSAKSSDISKHLVWEANRDLKTRGDAAGIDKESIDVFVVNLKD
CCCCCCCCCCCCCHHHHHHHHHCCCHHHHHEECCCCCCCCCCCCCCCCCCEEEEEEECHH
NLYRLWNRRSSGSYFPPSVRAVPIPKKTGGTWILGVPTVSDRIAQSVVKRVLEAILDQIF
HHHHHHCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
DQDQFGYRAGKSAHDAIAKTRQRCWFYDWVVEFDINPEKSRMVYCKDRNSSEEHDVINFD
CCCCCCHHCCCHHHHHHHHHHHHCEEEEEEEEEECCCCCCCEEEEECCCCCCCCCEEEHH
FLGFMLRPQRCLSESHCIHANFLPAISRSSRKEINREICRRHIQLKNDKTLDDLSNMFKA
HHHHHHCCHHHCCCCCEEECCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
KIRGWIAYYGRFYPSEIGWIWKNINGYLIRCVRRKYKRFASHKKQARCYLRQLAQGNQRL
HHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
FIHWELGCCHMA
EEEEECCEEECC
>Mature Secondary Structure 
ATRQDFGPTENQEEPVKSAKSSDISKHLVWEANRDLKTRGDAAGIDKESIDVFVVNLKD
CCCCCCCCCCCCHHHHHHHHHCCCHHHHHEECCCCCCCCCCCCCCCCCCEEEEEEECHH
NLYRLWNRRSSGSYFPPSVRAVPIPKKTGGTWILGVPTVSDRIAQSVVKRVLEAILDQIF
HHHHHHCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
DQDQFGYRAGKSAHDAIAKTRQRCWFYDWVVEFDINPEKSRMVYCKDRNSSEEHDVINFD
CCCCCCHHCCCHHHHHHHHHHHHCEEEEEEEEEECCCCCCCEEEEECCCCCCCCCEEEHH
FLGFMLRPQRCLSESHCIHANFLPAISRSSRKEINREICRRHIQLKNDKTLDDLSNMFKA
HHHHHHCCHHHCCCCCEEECCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
KIRGWIAYYGRFYPSEIGWIWKNINGYLIRCVRRKYKRFASHKKQARCYLRQLAQGNQRL
HHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
FIHWELGCCHMA
EEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA