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The map label for this gene is ybcL [C]

Identifier: 85858547

GI number: 85858547

Start: 705487

End: 706044

Strand: Direct

Name: ybcL [C]

Synonym: SYN_03131

Alternate gene names: 85858547

Gene position: 705487-706044 (Clockwise)

Preceding gene: 85858545

Following gene: 85858548

Centisome position: 22.19

GC content: 48.92

Gene sequence:

>558_bases
ATGAAAAAACAGTGCGGATGGATTATTGCCGGGTTGATTCTTTTACTTTGTCTTGGATTCTCAGGTAATGCCTTATCAGT
ACCGAAAGGAGGCAGAACAATGAAAATCACGAGTTCCGCTTTTAAAGAGAGGGAGATGATTCCCTTGAAATACACATGCG
ATGGGCGGGATATTTCTCCATCCCTGGAATGGGACAACGTGCCTGACGGCACGAAAAGTTTCGCTTTGATTTGTGACGAT
CCGGATGCGCCTCGGGGGACCTGGGTTCACTGGGTTGTTTATGATATTCCGCCCAGTGTGAAAAAACTTGATGAGAATGT
CCGACCGGAGGCCGAACTTGAAAGCGGTATTCGACAGGGTAAGAACGACTGGCCGAAAATCGGTTACGGCGGACCCTGTC
CACCCAGCGGCACTCATCGGTATTATTTCAAGCTGTATGCGCTGGACACGATGCTGAATCTTGCACCGGGAGCGACCAAA
GAGCAATTGTTGAAGGCAATGAAGGGGCATGTTCTTGCAGAAGCCCAACTCATGGGGAGATATCAAAGGCACAGATAA

Upstream 100 bases:

>100_bases
TTGCCTGCGTATCGTTACCATACCATTTCAACGAAGAAAGGTGCGCAAGATTTCTTCTTTTTTTCGTCCACTGAACGTGA
CGAGAAGGAGGTCACGGCCT

Downstream 100 bases:

>100_bases
AGAGGGACAGAAATTCCTTTCAGCAGGATGGCCGTGAAACGTCGCGCATCGGCGGAAAAATCCAGCAGGAAAAAGTATTT
TCAATGTGATAAGAAGCAAA

Product: phosphatidylethanolamine-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKKQCGWIIAGLILLLCLGFSGNALSVPKGGRTMKITSSAFKEREMIPLKYTCDGRDISPSLEWDNVPDGTKSFALICDD
PDAPRGTWVHWVVYDIPPSVKKLDENVRPEAELESGIRQGKNDWPKIGYGGPCPPSGTHRYYFKLYALDTMLNLAPGATK
EQLLKAMKGHVLAEAQLMGRYQRHR

Sequences:

>Translated_185_residues
MKKQCGWIIAGLILLLCLGFSGNALSVPKGGRTMKITSSAFKEREMIPLKYTCDGRDISPSLEWDNVPDGTKSFALICDD
PDAPRGTWVHWVVYDIPPSVKKLDENVRPEAELESGIRQGKNDWPKIGYGGPCPPSGTHRYYFKLYALDTMLNLAPGATK
EQLLKAMKGHVLAEAQLMGRYQRHR
>Mature_185_residues
MKKQCGWIIAGLILLLCLGFSGNALSVPKGGRTMKITSSAFKEREMIPLKYTCDGRDISPSLEWDNVPDGTKSFALICDD
PDAPRGTWVHWVVYDIPPSVKKLDENVRPEAELESGIRQGKNDWPKIGYGGPCPPSGTHRYYFKLYALDTMLNLAPGATK
EQLLKAMKGHVLAEAQLMGRYQRHR

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=185, Percent_Identity=36.2162162162162, Blast_Score=104, Evalue=4e-24,
Organism=Escherichia coli, GI1786990, Length=158, Percent_Identity=36.0759493670886, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 20649; Mature: 20649

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQCGWIIAGLILLLCLGFSGNALSVPKGGRTMKITSSAFKEREMIPLKYTCDGRDISP
CCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEHHHHHHCCCCCEEEEECCCCCCC
SLEWDNVPDGTKSFALICDDPDAPRGTWVHWVVYDIPPSVKKLDENVRPEAELESGIRQG
CCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHCCCCHHHHHHHHHCC
KNDWPKIGYGGPCPPSGTHRYYFKLYALDTMLNLAPGATKEQLLKAMKGHVLAEAQLMGR
CCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHH
YQRHR
HHHCC
>Mature Secondary Structure
MKKQCGWIIAGLILLLCLGFSGNALSVPKGGRTMKITSSAFKEREMIPLKYTCDGRDISP
CCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEHHHHHHCCCCCEEEEECCCCCCC
SLEWDNVPDGTKSFALICDDPDAPRGTWVHWVVYDIPPSVKKLDENVRPEAELESGIRQG
CCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHCCCCHHHHHHHHHCC
KNDWPKIGYGGPCPPSGTHRYYFKLYALDTMLNLAPGATKEQLLKAMKGHVLAEAQLMGR
CCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHH
YQRHR
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]