Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85858493

Identifier: 85858493

GI number: 85858493

Start: 649860

End: 650291

Strand: Direct

Name: 85858493

Synonym: SYN_00528

Alternate gene names: NA

Gene position: 649860-650291 (Clockwise)

Preceding gene: 85858492

Following gene: 85858494

Centisome position: 20.44

GC content: 47.22

Gene sequence:

>432_bases
ATGATTGAACAGTCAGGAAGGGGTGAATTCAGCGGAAGTAACGCTGGAGGAAATCTGCCGGGGAATCATGATCAGGTTTA
TGATCTCATTGATATCGTTTATGAATCACCGGACAAAATCTATGAACTGACCGATGTCGTGGAAGAACCGGGCTCCTTGC
TGAAAGAAGGCAGCCCGGAAGTCCTGATTGTCGATGGGTGGGGTTATCAAAGAGAGCCTCAATCCGGGGAAAAAATCCAT
GATCTTGTTGTAACTGCAGAAGAAGAACAGTTGGCGGTACAGCCGGGCGACCTTCTCGATGATGAGACGAGGAAAAAGAT
CATGGAAGCCGTGGAGAGGATGTGCCGCGAGATGATTCCCGGTATCGCGGAAAAAATTATTCGTGAAGAGATTGAAAAAT
TGAAACAGGAAACAGAAGAGGAGGTCCGTTAA

Upstream 100 bases:

>100_bases
ATCTGATCATCTATGATAATTTCCCCGAAATTCAGAGCTTAATCAGGATGATCGTCTGGAAGTGGAGCATCCCGGATAGC
AGAAACCGGAGAGCAAAAAA

Downstream 100 bases:

>100_bases
ACGATGTTCAGAAAGATTAATTTGCTGTCGTATTCAGCCCTTCTGGCGTTGATGATTCTTGCCGGATGCAGTGTGGGAAA
GCAGGCGGCGGTAATGAAAG

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MIEQSGRGEFSGSNAGGNLPGNHDQVYDLIDIVYESPDKIYELTDVVEEPGSLLKEGSPEVLIVDGWGYQREPQSGEKIH
DLVVTAEEEQLAVQPGDLLDDETRKKIMEAVERMCREMIPGIAEKIIREEIEKLKQETEEEVR

Sequences:

>Translated_143_residues
MIEQSGRGEFSGSNAGGNLPGNHDQVYDLIDIVYESPDKIYELTDVVEEPGSLLKEGSPEVLIVDGWGYQREPQSGEKIH
DLVVTAEEEQLAVQPGDLLDDETRKKIMEAVERMCREMIPGIAEKIIREEIEKLKQETEEEVR
>Mature_143_residues
MIEQSGRGEFSGSNAGGNLPGNHDQVYDLIDIVYESPDKIYELTDVVEEPGSLLKEGSPEVLIVDGWGYQREPQSGEKIH
DLVVTAEEEQLAVQPGDLLDDETRKKIMEAVERMCREMIPGIAEKIIREEIEKLKQETEEEVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16127; Mature: 16127

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEQSGRGEFSGSNAGGNLPGNHDQVYDLIDIVYESPDKIYELTDVVEEPGSLLKEGSPE
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
VLIVDGWGYQREPQSGEKIHDLVVTAEEEQLAVQPGDLLDDETRKKIMEAVERMCREMIP
EEEEECCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
GIAEKIIREEIEKLKQETEEEVR
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIEQSGRGEFSGSNAGGNLPGNHDQVYDLIDIVYESPDKIYELTDVVEEPGSLLKEGSPE
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
VLIVDGWGYQREPQSGEKIHDLVVTAEEEQLAVQPGDLLDDETRKKIMEAVERMCREMIP
EEEEECCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
GIAEKIIREEIEKLKQETEEEVR
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA