| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858469
Identifier: 85858469
GI number: 85858469
Start: 625163
End: 625684
Strand: Direct
Name: 85858469
Synonym: SYN_00552
Alternate gene names: NA
Gene position: 625163-625684 (Clockwise)
Preceding gene: 85858468
Following gene: 85858470
Centisome position: 19.66
GC content: 40.23
Gene sequence:
>522_bases GTGATCTACTTCCTTCTTTTGCCCATCTTTTCGTTCCTCTTTGTCGTTTTCCAAACAACAGTTTTCGAACTTCTTTTCTT CAACAGGGTCTGTGTTGAGATTACTCTTATTCTGGTAATATATGCAGGATTTCATATGGATGTTCTGAAAGGAGGACTGT TGAGTTTTTCCTTGGGGTTTTTCCTGGACATAATCATGGGGACCGTGATGGGGCTTTATGTCGTACTCTACCTGTCTGTT TTTTTTCTCTCGATGCTGGTTTCACTCAGGGTGTATGCCGAAAAAACGTTTTTCATCATGTCTTACGTATTTGTCTGCGC TCTTTTAGAATGCTGGATTGTTCTGATGTTTTATAAATATATTAGGGATCTTGATTTATTTCATAAATTTATCAGCGTTT TTCTTCCGCAGGTGTTGGTGGTCAGCCTTATAAGTCCGGCATGTTTTAACACCTTCAGACGCTTTGGAGACTTATTGAAT GTTGGGGCTGAAAGGTCGGATAAAAGGGCACGAAACCGCTGA
Upstream 100 bases:
>100_bases GAGACGGTCTGTTCCAGAAAGTTGAGGTGGTTCCTTCAGTTGATTTTTCGAAACTGGAGGAAGTGCTCGTTTTGATGCCA CAGGAAAAAGGTGCGAGAGA
Downstream 100 bases:
>100_bases TTACCGGCAGCGGTTCAAGATTGCTTTTGCAGTCGTTCTGGTTGCTCTGTCCCTGCTTCTTGTGAGACTGTGGTACCTTC AGGTGATCAAGGGACCTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MIYFLLLPIFSFLFVVFQTTVFELLFFNRVCVEITLILVIYAGFHMDVLKGGLLSFSLGFFLDIIMGTVMGLYVVLYLSV FFLSMLVSLRVYAEKTFFIMSYVFVCALLECWIVLMFYKYIRDLDLFHKFISVFLPQVLVVSLISPACFNTFRRFGDLLN VGAERSDKRARNR
Sequences:
>Translated_173_residues MIYFLLLPIFSFLFVVFQTTVFELLFFNRVCVEITLILVIYAGFHMDVLKGGLLSFSLGFFLDIIMGTVMGLYVVLYLSV FFLSMLVSLRVYAEKTFFIMSYVFVCALLECWIVLMFYKYIRDLDLFHKFISVFLPQVLVVSLISPACFNTFRRFGDLLN VGAERSDKRARNR >Mature_173_residues MIYFLLLPIFSFLFVVFQTTVFELLFFNRVCVEITLILVIYAGFHMDVLKGGLLSFSLGFFLDIIMGTVMGLYVVLYLSV FFLSMLVSLRVYAEKTFFIMSYVFVCALLECWIVLMFYKYIRDLDLFHKFISVFLPQVLVVSLISPACFNTFRRFGDLLN VGAERSDKRARNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20203; Mature: 20203
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYFLLLPIFSFLFVVFQTTVFELLFFNRVCVEITLILVIYAGFHMDVLKGGLLSFSLGF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLDIIMGTVMGLYVVLYLSVFFLSMLVSLRVYAEKTFFIMSYVFVCALLECWIVLMFYKY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRDLDLFHKFISVFLPQVLVVSLISPACFNTFRRFGDLLNVGAERSDKRARNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCC >Mature Secondary Structure MIYFLLLPIFSFLFVVFQTTVFELLFFNRVCVEITLILVIYAGFHMDVLKGGLLSFSLGF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLDIIMGTVMGLYVVLYLSVFFLSMLVSLRVYAEKTFFIMSYVFVCALLECWIVLMFYKY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRDLDLFHKFISVFLPQVLVVSLISPACFNTFRRFGDLLNVGAERSDKRARNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA