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The map label for this gene is tnpA [H]

Identifier: 85858455

GI number: 85858455

Start: 610431

End: 611636

Strand: Direct

Name: tnpA [H]

Synonym: SYN_03042

Alternate gene names: 85858455

Gene position: 610431-611636 (Clockwise)

Preceding gene: 85858454

Following gene: 85858459

Centisome position: 19.2

GC content: 46.77

Gene sequence:

>1206_bases
ATGTCCACATCGGTTCTTTATCATGCTTTCAATCTGAAGGGTATTACTTATAGAGCAACACGCTTCACGGGTGACGTCAT
CGAATATTTTGCAGATGTGAAAGAAGAATACATTCGCTGTCCAAAGTGCGGGCAGCGTAAATTTACCTTTAAAGGACAGA
AAACACGGAGTTTTCATCTGGGACCTATGGGGCGTAAGAGGTGTTTCCTTGTACTTTCCCTTCATCGAATAAAATGCAAC
ACTTGCGACACCCTTTGGTGGCCCGATCTGCCTTTTATGGTGGGGAAGCATAGATTTGCCCGATCCTTTGCTCTGATTGT
TCTGGATCTGCTTCGATTCGGCACGATTCGCTGGGTTGCCGATTACCTCGGCGTGGGTTGGGATATGATCAAAGAGATTC
ATAAGTTGAAATTGCAGCGCCTCTATCGGAACATTCCTCTTCATAAAGTTCGGTATATTGGCATTGATGAATTCAGCATC
CGGAAAGGCCATGAGTACATGACCACGGTGATGGATCTCTCCGAAGGACGAATCCTTTACGCCACTGAGGGAAAGGGCAA
GGAGGGGATTTTACCCTTCCTGAAAAAACTTGCACGCAAGGGGAAAAAACTGCGAGCGGTTGCAATGGACATGGGAATTT
CCTTCTTCTCCGCCGTCCGGGAAGCCCTTCCCAATATCGATGTCGTCTTCGACCGTTACCATATTATGGCTCTGATGAAT
CAAGGCATCGAAAACTTGCGCAGAAATCATCAGAAAGAACTTGATGATATCGGGAAGCAAACCCTCAAGGGAAACCGCTT
CCTCCTTTTGCGAAATTATGATTCCCTGAAGCCGGACCATAAGGAACGTCTCGATGCCCTGATGCAGGCCAATCAGCCTC
TATTCGTCATGCATTCCATGAAAGAGCAACTCAGACTCTTCTGGGAAATACCGGAGTACGCCCAGGCTGTTACCTTCCTT
GACACCTGGTGTAAGGACGCCATGCTGTCCGGAATCAAAGAACTCGTCAAAGTAGCCAAAACGCTCTCCGGATACAGGAC
TGCGATACTCAATTATTTCAAACATCACATTACAAATGCCGCCCTTGAGGGCACAAACAACAAAATTAAAACTTTAAAAA
GGCAGGCCTATGGATTCCGGGATATGGAATACTTCAAACTCCGCCTCTATCACCTGCATGCTCAGAGGTACTCATTAACC
GGATGA

Upstream 100 bases:

>100_bases
ATCCGGTTAATGAGTACCTTGGTATTGCATAAAATCACATGGACATGGCAAGAGCCCTGTTGTTTGAGACCAATCGAACA
ACAAAAGGAGGCTCCAGACC

Downstream 100 bases:

>100_bases
ACCTGATTTCTTAGGTTTTTGCTTTCCTCTTTTTCTCTTCTTTTCCGGTATCCTGTCCAGTTTACCGTTTTACCCCCTAT
AAAGGGGGGGTAAAACCGGC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MSTSVLYHAFNLKGITYRATRFTGDVIEYFADVKEEYIRCPKCGQRKFTFKGQKTRSFHLGPMGRKRCFLVLSLHRIKCN
TCDTLWWPDLPFMVGKHRFARSFALIVLDLLRFGTIRWVADYLGVGWDMIKEIHKLKLQRLYRNIPLHKVRYIGIDEFSI
RKGHEYMTTVMDLSEGRILYATEGKGKEGILPFLKKLARKGKKLRAVAMDMGISFFSAVREALPNIDVVFDRYHIMALMN
QGIENLRRNHQKELDDIGKQTLKGNRFLLLRNYDSLKPDHKERLDALMQANQPLFVMHSMKEQLRLFWEIPEYAQAVTFL
DTWCKDAMLSGIKELVKVAKTLSGYRTAILNYFKHHITNAALEGTNNKIKTLKRQAYGFRDMEYFKLRLYHLHAQRYSLT
G

Sequences:

>Translated_401_residues
MSTSVLYHAFNLKGITYRATRFTGDVIEYFADVKEEYIRCPKCGQRKFTFKGQKTRSFHLGPMGRKRCFLVLSLHRIKCN
TCDTLWWPDLPFMVGKHRFARSFALIVLDLLRFGTIRWVADYLGVGWDMIKEIHKLKLQRLYRNIPLHKVRYIGIDEFSI
RKGHEYMTTVMDLSEGRILYATEGKGKEGILPFLKKLARKGKKLRAVAMDMGISFFSAVREALPNIDVVFDRYHIMALMN
QGIENLRRNHQKELDDIGKQTLKGNRFLLLRNYDSLKPDHKERLDALMQANQPLFVMHSMKEQLRLFWEIPEYAQAVTFL
DTWCKDAMLSGIKELVKVAKTLSGYRTAILNYFKHHITNAALEGTNNKIKTLKRQAYGFRDMEYFKLRLYHLHAQRYSLT
G
>Mature_400_residues
STSVLYHAFNLKGITYRATRFTGDVIEYFADVKEEYIRCPKCGQRKFTFKGQKTRSFHLGPMGRKRCFLVLSLHRIKCNT
CDTLWWPDLPFMVGKHRFARSFALIVLDLLRFGTIRWVADYLGVGWDMIKEIHKLKLQRLYRNIPLHKVRYIGIDEFSIR
KGHEYMTTVMDLSEGRILYATEGKGKEGILPFLKKLARKGKKLRAVAMDMGISFFSAVREALPNIDVVFDRYHIMALMNQ
GIENLRRNHQKELDDIGKQTLKGNRFLLLRNYDSLKPDHKERLDALMQANQPLFVMHSMKEQLRLFWEIPEYAQAVTFLD
TWCKDAMLSGIKELVKVAKTLSGYRTAILNYFKHHITNAALEGTNNKIKTLKRQAYGFRDMEYFKLRLYHLHAQRYSLTG

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 47039; Mature: 46908

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSVLYHAFNLKGITYRATRFTGDVIEYFADVKEEYIRCPKCGQRKFTFKGQKTRSFHL
CCCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEC
GPMGRKRCFLVLSLHRIKCNTCDTLWWPDLPFMVGKHRFARSFALIVLDLLRFGTIRWVA
CCCCCCCEEEEEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYLGVGWDMIKEIHKLKLQRLYRNIPLHKVRYIGIDEFSIRKGHEYMTTVMDLSEGRILY
HHHCCCHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCHHHHCCHHHHHHHHHCCCCEEEE
ATEGKGKEGILPFLKKLARKGKKLRAVAMDMGISFFSAVREALPNIDVVFDRYHIMALMN
EECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH
QGIENLRRNHQKELDDIGKQTLKGNRFLLLRNYDSLKPDHKERLDALMQANQPLFVMHSM
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEHHHHH
KEQLRLFWEIPEYAQAVTFLDTWCKDAMLSGIKELVKVAKTLSGYRTAILNYFKHHITNA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALEGTNNKIKTLKRQAYGFRDMEYFKLRLYHLHAQRYSLTG
HHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
STSVLYHAFNLKGITYRATRFTGDVIEYFADVKEEYIRCPKCGQRKFTFKGQKTRSFHL
CCCEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEC
GPMGRKRCFLVLSLHRIKCNTCDTLWWPDLPFMVGKHRFARSFALIVLDLLRFGTIRWVA
CCCCCCCEEEEEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYLGVGWDMIKEIHKLKLQRLYRNIPLHKVRYIGIDEFSIRKGHEYMTTVMDLSEGRILY
HHHCCCHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCHHHHCCHHHHHHHHHCCCCEEEE
ATEGKGKEGILPFLKKLARKGKKLRAVAMDMGISFFSAVREALPNIDVVFDRYHIMALMN
EECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHH
QGIENLRRNHQKELDDIGKQTLKGNRFLLLRNYDSLKPDHKERLDALMQANQPLFVMHSM
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCEEHHHHH
KEQLRLFWEIPEYAQAVTFLDTWCKDAMLSGIKELVKVAKTLSGYRTAILNYFKHHITNA
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALEGTNNKIKTLKRQAYGFRDMEYFKLRLYHLHAQRYSLTG
HHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]