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The map label for this gene is 85858388

Identifier: 85858388

GI number: 85858388

Start: 541019

End: 542458

Strand: Direct

Name: 85858388

Synonym: SYN_02304

Alternate gene names: NA

Gene position: 541019-542458 (Clockwise)

Preceding gene: 85858387

Following gene: 85858389

Centisome position: 17.02

GC content: 63.33

Gene sequence:

>1440_bases
ATGAGCAAAGGCAACGCGAAGATCACGCCGGCCAACCCCGGCGGTCTTTTTCTCCCCTACCAGGAGCGGTGGATTCTCGA
CCGGTCCCGCCTGAAGCTGATGGAGAAGGCCCGGCAGATCGGCCTTTCCTGGAGCACGTCCTACGCCTGCGTGGAGCGCA
CCGCCGAAGCGGGCGCCCGTCATGATCAGTGGGTCTCCAGCCGCGACGACCTTCAGGCCCGACTCTTCGTGGAAGACTGC
AAAATGTGGGGAAAGGTGCTTCAGCTCGCCGCCGAGGATCTGGGGGAACGGGTCATCGACGAGGAAAAGAAGATCTCCGC
CTATGTCCTGCATTTTTCCTCCGGGAAGCGGATCCACTCCATGAGCTCCAACCCGGACGCCCAGGCCGGCAAACGCGGCG
GCCGCGTCCTGGACGAGTTCGCCCTGCATCCCGATCCTCGCAAACTGTGGAGCATCGCCTATCCGGGCATCACCTGGGGC
GGTTCCCTGGAGGTCATCTCCACCCACCGGGGGAGCGCGAATTTCTTCAACGGCCTGGTGCGCGAGGTCAAGGAACACGG
CAACCCCAAGAACATCAGCCTGCACCGGGTCACCCTGGAAGACGCCCTGACCGACGGCTTCCTCTACAAGCTCCAGCAGT
CCCTGCCTGCGGACGACGAGATTCAGGGGATGGACGAGGCAACCTATTTCGATTTCGTCAAGTCCGGCTGCGCCGACGAG
GAATCCTTTCAGCAGGAATACATGTGCAACCCCGCGGACGACGCCACGGCCTTTCTGGAATACGACCTGATCGCCGCCTG
CGAGTATGGAGCGACGGAAAACTGGCGGATGAGCCTGGACGGGCGAAGGCCGGAAGGCCCGCTGTACGCCGGACTGGACA
TCGGACGGAAGAAGGATCTGACGGTGCTGTGGGTCCTGGAGAAGCTCGGGGACGTCCTCTATACCCGCGAGGTCATCGCC
CTGAGAAACATGAGCAAGCCCGACCAGGAAAAGGTGCTCTGGCCCTGGCTGGCCCGAATGAACCGGGCCTGTCTGGATTA
CACCGGCCTGGGCATCGGCTGGGGCGACGACGCGAAGAAGAAGATCGGCGAATACCGCATCGAAACCGTGACCTTCACCC
CCCATGTCAAGGAGGCCCTGGCCTATCCCGTGCGGGGGACGATGGAGGACCGGAGGCTGCGGATTCCCTACGACCCCAGG
ATCCGGGCCGATCTGCGGTCCGTGACGAAGGAAACGACGGCTGCGGGAAACATCCGCTTCACGGCGGAACGCTCGGAAGA
CGGCCACGCCGACCGCTTCTGGGCCCTGGCCCTGGCGATTTCCGCGGCGGGTACTGACATCGGCGGCCCGGTGGAATATC
AGGCCGTCTCCCGAAGACGGTTCTCGACAACATCTGATCAATCGCCGACGGGCGTCTATCGACAGCGAGGTGCTTACTGA

Upstream 100 bases:

>100_bases
GCCGCTGATGCCGCTGAGAAAACGGCGAAACAGGAAGGCGTTTCCCCGGCGACCATCGAGAAGATCCGGCGCGACGTCCT
GATGATGGCGGGCTGATGAG

Downstream 100 bases:

>100_bases
TGGCAATACTATTCGATCAATTCGGGCGGGAAATCCAGGTCGAAAAACGACCGGAAACCCGGCAGATCGCCGTGACGACG
ATCCGGGACCGGTGGAGCAA

Product: mu-like prophage Flumu protein gp28

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 478

Protein sequence:

>479_residues
MSKGNAKITPANPGGLFLPYQERWILDRSRLKLMEKARQIGLSWSTSYACVERTAEAGARHDQWVSSRDDLQARLFVEDC
KMWGKVLQLAAEDLGERVIDEEKKISAYVLHFSSGKRIHSMSSNPDAQAGKRGGRVLDEFALHPDPRKLWSIAYPGITWG
GSLEVISTHRGSANFFNGLVREVKEHGNPKNISLHRVTLEDALTDGFLYKLQQSLPADDEIQGMDEATYFDFVKSGCADE
ESFQQEYMCNPADDATAFLEYDLIAACEYGATENWRMSLDGRRPEGPLYAGLDIGRKKDLTVLWVLEKLGDVLYTREVIA
LRNMSKPDQEKVLWPWLARMNRACLDYTGLGIGWGDDAKKKIGEYRIETVTFTPHVKEALAYPVRGTMEDRRLRIPYDPR
IRADLRSVTKETTAAGNIRFTAERSEDGHADRFWALALAISAAGTDIGGPVEYQAVSRRRFSTTSDQSPTGVYRQRGAY

Sequences:

>Translated_479_residues
MSKGNAKITPANPGGLFLPYQERWILDRSRLKLMEKARQIGLSWSTSYACVERTAEAGARHDQWVSSRDDLQARLFVEDC
KMWGKVLQLAAEDLGERVIDEEKKISAYVLHFSSGKRIHSMSSNPDAQAGKRGGRVLDEFALHPDPRKLWSIAYPGITWG
GSLEVISTHRGSANFFNGLVREVKEHGNPKNISLHRVTLEDALTDGFLYKLQQSLPADDEIQGMDEATYFDFVKSGCADE
ESFQQEYMCNPADDATAFLEYDLIAACEYGATENWRMSLDGRRPEGPLYAGLDIGRKKDLTVLWVLEKLGDVLYTREVIA
LRNMSKPDQEKVLWPWLARMNRACLDYTGLGIGWGDDAKKKIGEYRIETVTFTPHVKEALAYPVRGTMEDRRLRIPYDPR
IRADLRSVTKETTAAGNIRFTAERSEDGHADRFWALALAISAAGTDIGGPVEYQAVSRRRFSTTSDQSPTGVYRQRGAY
>Mature_478_residues
SKGNAKITPANPGGLFLPYQERWILDRSRLKLMEKARQIGLSWSTSYACVERTAEAGARHDQWVSSRDDLQARLFVEDCK
MWGKVLQLAAEDLGERVIDEEKKISAYVLHFSSGKRIHSMSSNPDAQAGKRGGRVLDEFALHPDPRKLWSIAYPGITWGG
SLEVISTHRGSANFFNGLVREVKEHGNPKNISLHRVTLEDALTDGFLYKLQQSLPADDEIQGMDEATYFDFVKSGCADEE
SFQQEYMCNPADDATAFLEYDLIAACEYGATENWRMSLDGRRPEGPLYAGLDIGRKKDLTVLWVLEKLGDVLYTREVIAL
RNMSKPDQEKVLWPWLARMNRACLDYTGLGIGWGDDAKKKIGEYRIETVTFTPHVKEALAYPVRGTMEDRRLRIPYDPRI
RADLRSVTKETTAAGNIRFTAERSEDGHADRFWALALAISAAGTDIGGPVEYQAVSRRRFSTTSDQSPTGVYRQRGAY

Specific function: Unknown

COG id: COG4373

COG function: function code R; Mu-like prophage FluMu protein gp28

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To phage Mu protein gp28 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004921
- InterPro:   IPR012036 [H]

Pfam domain/function: PF03237 Terminase_6 [H]

EC number: NA

Molecular weight: Translated: 53964; Mature: 53833

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKGNAKITPANPGGLFLPYQERWILDRSRLKLMEKARQIGLSWSTSYACVERTAEAGAR
CCCCCCEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC
HDQWVSSRDDLQARLFVEDCKMWGKVLQLAAEDLGERVIDEEKKISAYVLHFSSGKRIHS
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEC
MSSNPDAQAGKRGGRVLDEFALHPDPRKLWSIAYPGITWGGSLEVISTHRGSANFFNGLV
CCCCCCHHHHHCCCHHHHHHCCCCCHHHHHEEECCCEECCCCEEEEEECCCCHHHHHHHH
REVKEHGNPKNISLHRVTLEDALTDGFLYKLQQSLPADDEIQGMDEATYFDFVKSGCADE
HHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCH
ESFQQEYMCNPADDATAFLEYDLIAACEYGATENWRMSLDGRRPEGPLYAGLDIGRKKDL
HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCC
TVLWVLEKLGDVLYTREVIALRNMSKPDQEKVLWPWLARMNRACLDYTGLGIGWGDDAKK
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
KIGEYRIETVTFTPHVKEALAYPVRGTMEDRRLRIPYDPRIRADLRSVTKETTAAGNIRF
HHCCEEEEEEEECCHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCEEE
TAERSEDGHADRFWALALAISAAGTDIGGPVEYQAVSRRRFSTTSDQSPTGVYRQRGAY
EEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCC
>Mature Secondary Structure 
SKGNAKITPANPGGLFLPYQERWILDRSRLKLMEKARQIGLSWSTSYACVERTAEAGAR
CCCCCEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC
HDQWVSSRDDLQARLFVEDCKMWGKVLQLAAEDLGERVIDEEKKISAYVLHFSSGKRIHS
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEC
MSSNPDAQAGKRGGRVLDEFALHPDPRKLWSIAYPGITWGGSLEVISTHRGSANFFNGLV
CCCCCCHHHHHCCCHHHHHHCCCCCHHHHHEEECCCEECCCCEEEEEECCCCHHHHHHHH
REVKEHGNPKNISLHRVTLEDALTDGFLYKLQQSLPADDEIQGMDEATYFDFVKSGCADE
HHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCH
ESFQQEYMCNPADDATAFLEYDLIAACEYGATENWRMSLDGRRPEGPLYAGLDIGRKKDL
HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCC
TVLWVLEKLGDVLYTREVIALRNMSKPDQEKVLWPWLARMNRACLDYTGLGIGWGDDAKK
CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
KIGEYRIETVTFTPHVKEALAYPVRGTMEDRRLRIPYDPRIRADLRSVTKETTAAGNIRF
HHCCEEEEEEEECCHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCEEE
TAERSEDGHADRFWALALAISAAGTDIGGPVEYQAVSRRRFSTTSDQSPTGVYRQRGAY
EEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]