Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85858386

Identifier: 85858386

GI number: 85858386

Start: 540149

End: 540478

Strand: Direct

Name: 85858386

Synonym: SYN_02306

Alternate gene names: NA

Gene position: 540149-540478 (Clockwise)

Preceding gene: 85858385

Following gene: 85858387

Centisome position: 16.99

GC content: 62.42

Gene sequence:

>330_bases
ATGAAAGAACCTTGCCCTGTGCCCGTGGATATCGAAAAAGCCCGCCGTGAAGAGCTGCGCTGGCTGATCCTGCGCGCCCT
CTATGCCGCCCGTCCCATCGGGACGACGGAAACGATCATCAAGAACGCCATCGAGCCGGTGATGCTGGACATTACCCTGC
TGGAGATCCGCCGGGAGCTGGACTATCTGGAAGACCGGGAACTGCTCGCCGTCGAACGCTCCCGCGCCGTTCCCGTCTGG
TCCGCGAAGATCAACCGTCTGGGCGTCGATCTCGTGGAATACACGGTGCCCTGTGATCCCGGAATCGCCCGCCCGGAGAA
GTGGTGGTAG

Upstream 100 bases:

>100_bases
GCAAGGAAGATCACATGCGCTTTGAACTGGTGCTGAATACCAAGTTGGATCGACTGCATCAGGATATGATGACAGCCATC
AATGCCAAGGAGAAAACCCG

Downstream 100 bases:

>100_bases
CCATGCCGCGAAGATCGAAAATCCTCGACCTGCCCCCGGATGTAAAAGCCGAACTGGACCGCCGCCTGATTACGGGCGGT
TTCTGCGACTACGAAGGGCT

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MKEPCPVPVDIEKARREELRWLILRALYAARPIGTTETIIKNAIEPVMLDITLLEIRRELDYLEDRELLAVERSRAVPVW
SAKINRLGVDLVEYTVPCDPGIARPEKWW

Sequences:

>Translated_109_residues
MKEPCPVPVDIEKARREELRWLILRALYAARPIGTTETIIKNAIEPVMLDITLLEIRRELDYLEDRELLAVERSRAVPVW
SAKINRLGVDLVEYTVPCDPGIARPEKWW
>Mature_109_residues
MKEPCPVPVDIEKARREELRWLILRALYAARPIGTTETIIKNAIEPVMLDITLLEIRRELDYLEDRELLAVERSRAVPVW
SAKINRLGVDLVEYTVPCDPGIARPEKWW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12693; Mature: 12693

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEPCPVPVDIEKARREELRWLILRALYAARPIGTTETIIKNAIEPVMLDITLLEIRREL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DYLEDRELLAVERSRAVPVWSAKINRLGVDLVEYTVPCDPGIARPEKWW
HHHCCCHHHHHHHCCCCCHHHHHHHHHCHHHHHEECCCCCCCCCCCCCC
>Mature Secondary Structure
MKEPCPVPVDIEKARREELRWLILRALYAARPIGTTETIIKNAIEPVMLDITLLEIRREL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DYLEDRELLAVERSRAVPVWSAKINRLGVDLVEYTVPCDPGIARPEKWW
HHHCCCHHHHHHHCCCCCHHHHHHHHHCHHHHHEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA