| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is cwlK [H]
Identifier: 85858381
GI number: 85858381
Start: 538375
End: 538773
Strand: Direct
Name: cwlK [H]
Synonym: SYN_02309
Alternate gene names: 85858381
Gene position: 538375-538773 (Clockwise)
Preceding gene: 85858380
Following gene: 85858382
Centisome position: 16.93
GC content: 60.15
Gene sequence:
>399_bases ATGAGCCGCCTGATTTCCGACTGCCTTCCCGAACTCCAGGAGAAGGCGGAAGCCTTTTCCGTGGCGATGGTCAACGCGGG GATCCCTTTCATGTACACCTGCACCAGGCGGACACAGGAAGAGCAGGACGCCCTCTATGCCCAGGGGCGGACGAAGCCGG GAAAGATAGTCACCTGGACGCGCAAGTCCAAGCATATCGACGGCAAGGCCTTCGACATCGCCATCCTCAGGGATTTCAAG CCCTGCTGGGATGTGAAGGTCGACGTGAACGAAAACGAGATTCCCGATTACGAGGAAGCGGGCCGGATCGGCGAATCCGT GGGTCTGCGCTGGGGCGGGAGATTCAGGAACAGCAAGGGGAAGCCGCGCCCGGATTATCCCCACTTCGAGATCGCTTAG
Upstream 100 bases:
>100_bases CCCGGCAGGCAAGAAAGGGGCTGAATTCGGACGACTGCCTGAAGATCAAGCATTATGCGGACATCCTGATCTCATCCCTG TCGGTGAAGGAGCCCAAGCC
Downstream 100 bases:
>100_bases GAGGAAACAATGAGCAGATGGTTCTGTGTGAAGGAAAGCGTTGAACCGGCCGTCTCCATGCTGGCCTTTGTGGCCGGCGG GCTGGTGAAGGCCAACAATC
Product: L-alanyl-D-glutamate peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MSRLISDCLPELQEKAEAFSVAMVNAGIPFMYTCTRRTQEEQDALYAQGRTKPGKIVTWTRKSKHIDGKAFDIAILRDFK PCWDVKVDVNENEIPDYEEAGRIGESVGLRWGGRFRNSKGKPRPDYPHFEIA
Sequences:
>Translated_132_residues MSRLISDCLPELQEKAEAFSVAMVNAGIPFMYTCTRRTQEEQDALYAQGRTKPGKIVTWTRKSKHIDGKAFDIAILRDFK PCWDVKVDVNENEIPDYEEAGRIGESVGLRWGGRFRNSKGKPRPDYPHFEIA >Mature_131_residues SRLISDCLPELQEKAEAFSVAMVNAGIPFMYTCTRRTQEEQDALYAQGRTKPGKIVTWTRKSKHIDGKAFDIAILRDFKP CWDVKVDVNENEIPDYEEAGRIGESVGLRWGGRFRNSKGKPRPDYPHFEIA
Specific function: Cleaves the linkage of the L-alanine-D-glutamic acid of B.subtilis cell wall [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M15C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009045 - InterPro: IPR012340 - InterPro: IPR003709 [H]
Pfam domain/function: PF02557 VanY [H]
EC number: NA
Molecular weight: Translated: 15093; Mature: 14962
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLISDCLPELQEKAEAFSVAMVNAGIPFMYTCTRRTQEEQDALYAQGRTKPGKIVTWT CCHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCCHHHHHHHHCCCCCCCCEEEEE RKSKHIDGKAFDIAILRDFKPCWDVKVDVNENEIPDYEEAGRIGESVGLRWGGRFRNSKG CCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCHHHHHCCCHHCCCCCCCCCCCCCC KPRPDYPHFEIA CCCCCCCCEECC >Mature Secondary Structure SRLISDCLPELQEKAEAFSVAMVNAGIPFMYTCTRRTQEEQDALYAQGRTKPGKIVTWT CHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECCCCCHHHHHHHHCCCCCCCCEEEEE RKSKHIDGKAFDIAILRDFKPCWDVKVDVNENEIPDYEEAGRIGESVGLRWGGRFRNSKG CCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCHHHHHCCCHHCCCCCCCCCCCCCC KPRPDYPHFEIA CCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377 [H]