| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858374
Identifier: 85858374
GI number: 85858374
Start: 534750
End: 535352
Strand: Direct
Name: 85858374
Synonym: SYN_03373
Alternate gene names: NA
Gene position: 534750-535352 (Clockwise)
Preceding gene: 85858372
Following gene: 85858375
Centisome position: 16.82
GC content: 59.04
Gene sequence:
>603_bases GTGTCAATAACAGAAAAAGGACGCTTCAAGATGTCTTCAACAACGATTAAATGCCCAGTGTGCCTGGCGGAGATCGACGT CCTGGAAGCCCTGGCGGAAGGTGATCTGCGGGCGGTTCTGGAGATGCAGGACGCCTTTTATCCGCATGGCCGCCTGGTGC GGGCCTACTTCGAACTGTTCGGCGTGTCGCCGGGATTCCGGAATGTTCACCGACTGCGGGTCCTCACGGAAGAGATGCGG ACGCTCTTCGAGCGGGAGGAATTCTCCTACAACCGGAAGTTCTACCGGATCTCCCGCGCCGGCATTGCCGAGGCCCTTTC CGGCATGGTCAAACGCCGCTTCCCGGAGCCCCTGAAGAACCACAATTATCTGAAGTCCTGTATGATCACGATTTCCGAGC GGGAAGCCTCGACAGCTTCGAAAACGGCGGAACGGGATCTGAGGAAGAAGGAAACCGGCCTGCGATCCGGAGCGCGATAT CCCGTCACGGAGGAGACCGTGACGGTCCCGAAGATGAAGGACGTTCCTCCGGCCCGCCTGACGCCCGAGCAGATCGAGGC CAACCGGAAACGGCTCAAGGACATGATCACCGGAATCGGATAA
Upstream 100 bases:
>100_bases AAGAGACCGTCAAGACGGTCATAATCCAGCGAGGGATCACGGGCGTTCTCCGGAGGGTCATTTTGATTGGCGAATCGGAA TATAGTCCTCCGGAGCACCC
Downstream 100 bases:
>100_bases GAAACATGCCGCCGCCCGGCGCCGAGGCGGGGAATATCGGGCCTCCATACTCAGGTCCCGCCGGAACCGCCCTGTGGAAT CCGGCGATAAACCTTAATGA
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MSITEKGRFKMSSTTIKCPVCLAEIDVLEALAEGDLRAVLEMQDAFYPHGRLVRAYFELFGVSPGFRNVHRLRVLTEEMR TLFEREEFSYNRKFYRISRAGIAEALSGMVKRRFPEPLKNHNYLKSCMITISEREASTASKTAERDLRKKETGLRSGARY PVTEETVTVPKMKDVPPARLTPEQIEANRKRLKDMITGIG
Sequences:
>Translated_200_residues MSITEKGRFKMSSTTIKCPVCLAEIDVLEALAEGDLRAVLEMQDAFYPHGRLVRAYFELFGVSPGFRNVHRLRVLTEEMR TLFEREEFSYNRKFYRISRAGIAEALSGMVKRRFPEPLKNHNYLKSCMITISEREASTASKTAERDLRKKETGLRSGARY PVTEETVTVPKMKDVPPARLTPEQIEANRKRLKDMITGIG >Mature_199_residues SITEKGRFKMSSTTIKCPVCLAEIDVLEALAEGDLRAVLEMQDAFYPHGRLVRAYFELFGVSPGFRNVHRLRVLTEEMRT LFEREEFSYNRKFYRISRAGIAEALSGMVKRRFPEPLKNHNYLKSCMITISEREASTASKTAERDLRKKETGLRSGARYP VTEETVTVPKMKDVPPARLTPEQIEANRKRLKDMITGIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22922; Mature: 22791
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITEKGRFKMSSTTIKCPVCLAEIDVLEALAEGDLRAVLEMQDAFYPHGRLVRAYFELF CCCCCCCCEEECCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHH GVSPGFRNVHRLRVLTEEMRTLFEREEFSYNRKFYRISRAGIAEALSGMVKRRFPEPLKN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC HNYLKSCMITISEREASTASKTAERDLRKKETGLRSGARYPVTEETVTVPKMKDVPPARL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCC TPEQIEANRKRLKDMITGIG CHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SITEKGRFKMSSTTIKCPVCLAEIDVLEALAEGDLRAVLEMQDAFYPHGRLVRAYFELF CCCCCCCEEECCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHH GVSPGFRNVHRLRVLTEEMRTLFEREEFSYNRKFYRISRAGIAEALSGMVKRRFPEPLKN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC HNYLKSCMITISEREASTASKTAERDLRKKETGLRSGARYPVTEETVTVPKMKDVPPARL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCC TPEQIEANRKRLKDMITGIG CHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA