Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85858374

Identifier: 85858374

GI number: 85858374

Start: 534750

End: 535352

Strand: Direct

Name: 85858374

Synonym: SYN_03373

Alternate gene names: NA

Gene position: 534750-535352 (Clockwise)

Preceding gene: 85858372

Following gene: 85858375

Centisome position: 16.82

GC content: 59.04

Gene sequence:

>603_bases
GTGTCAATAACAGAAAAAGGACGCTTCAAGATGTCTTCAACAACGATTAAATGCCCAGTGTGCCTGGCGGAGATCGACGT
CCTGGAAGCCCTGGCGGAAGGTGATCTGCGGGCGGTTCTGGAGATGCAGGACGCCTTTTATCCGCATGGCCGCCTGGTGC
GGGCCTACTTCGAACTGTTCGGCGTGTCGCCGGGATTCCGGAATGTTCACCGACTGCGGGTCCTCACGGAAGAGATGCGG
ACGCTCTTCGAGCGGGAGGAATTCTCCTACAACCGGAAGTTCTACCGGATCTCCCGCGCCGGCATTGCCGAGGCCCTTTC
CGGCATGGTCAAACGCCGCTTCCCGGAGCCCCTGAAGAACCACAATTATCTGAAGTCCTGTATGATCACGATTTCCGAGC
GGGAAGCCTCGACAGCTTCGAAAACGGCGGAACGGGATCTGAGGAAGAAGGAAACCGGCCTGCGATCCGGAGCGCGATAT
CCCGTCACGGAGGAGACCGTGACGGTCCCGAAGATGAAGGACGTTCCTCCGGCCCGCCTGACGCCCGAGCAGATCGAGGC
CAACCGGAAACGGCTCAAGGACATGATCACCGGAATCGGATAA

Upstream 100 bases:

>100_bases
AAGAGACCGTCAAGACGGTCATAATCCAGCGAGGGATCACGGGCGTTCTCCGGAGGGTCATTTTGATTGGCGAATCGGAA
TATAGTCCTCCGGAGCACCC

Downstream 100 bases:

>100_bases
GAAACATGCCGCCGCCCGGCGCCGAGGCGGGGAATATCGGGCCTCCATACTCAGGTCCCGCCGGAACCGCCCTGTGGAAT
CCGGCGATAAACCTTAATGA

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MSITEKGRFKMSSTTIKCPVCLAEIDVLEALAEGDLRAVLEMQDAFYPHGRLVRAYFELFGVSPGFRNVHRLRVLTEEMR
TLFEREEFSYNRKFYRISRAGIAEALSGMVKRRFPEPLKNHNYLKSCMITISEREASTASKTAERDLRKKETGLRSGARY
PVTEETVTVPKMKDVPPARLTPEQIEANRKRLKDMITGIG

Sequences:

>Translated_200_residues
MSITEKGRFKMSSTTIKCPVCLAEIDVLEALAEGDLRAVLEMQDAFYPHGRLVRAYFELFGVSPGFRNVHRLRVLTEEMR
TLFEREEFSYNRKFYRISRAGIAEALSGMVKRRFPEPLKNHNYLKSCMITISEREASTASKTAERDLRKKETGLRSGARY
PVTEETVTVPKMKDVPPARLTPEQIEANRKRLKDMITGIG
>Mature_199_residues
SITEKGRFKMSSTTIKCPVCLAEIDVLEALAEGDLRAVLEMQDAFYPHGRLVRAYFELFGVSPGFRNVHRLRVLTEEMRT
LFEREEFSYNRKFYRISRAGIAEALSGMVKRRFPEPLKNHNYLKSCMITISEREASTASKTAERDLRKKETGLRSGARYP
VTEETVTVPKMKDVPPARLTPEQIEANRKRLKDMITGIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22922; Mature: 22791

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSITEKGRFKMSSTTIKCPVCLAEIDVLEALAEGDLRAVLEMQDAFYPHGRLVRAYFELF
CCCCCCCCEEECCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHH
GVSPGFRNVHRLRVLTEEMRTLFEREEFSYNRKFYRISRAGIAEALSGMVKRRFPEPLKN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
HNYLKSCMITISEREASTASKTAERDLRKKETGLRSGARYPVTEETVTVPKMKDVPPARL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCC
TPEQIEANRKRLKDMITGIG
CHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SITEKGRFKMSSTTIKCPVCLAEIDVLEALAEGDLRAVLEMQDAFYPHGRLVRAYFELF
CCCCCCCEEECCCEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHH
GVSPGFRNVHRLRVLTEEMRTLFEREEFSYNRKFYRISRAGIAEALSGMVKRRFPEPLKN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
HNYLKSCMITISEREASTASKTAERDLRKKETGLRSGARYPVTEETVTVPKMKDVPPARL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCC
TPEQIEANRKRLKDMITGIG
CHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA