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The map label for this gene is 85858235

Identifier: 85858235

GI number: 85858235

Start: 389455

End: 390954

Strand: Direct

Name: 85858235

Synonym: SYN_01137

Alternate gene names: NA

Gene position: 389455-390954 (Clockwise)

Preceding gene: 85858234

Following gene: 85858236

Centisome position: 12.25

GC content: 53.2

Gene sequence:

>1500_bases
ATGAAGAAGATCGTGAAATGGATGTTGATGATTTGTCTGGTGCTGCTGCCAATGGAAAGCTTTGCCGTTGTCGCTTTTCC
GGGAGCGGAAGGTTATGGAGCAAACACCATCGGAGGGAGAGGGAGCTCTGCGGGTCCTTACTCATTCAGTGTCTATGAAG
TAACGAATTTGAACGACAGCGGCGCCGGCAGTCTCAGGGCCGCCGTTCAGGCCAGCGGACCGAGGTTCGTCATTTTCAAA
ACCGGCGGGACGATCACCCTGTCGTCCACGTTGAACGTATCCAATCCCTACATCACCATCGCCGGACAGACCGCTCCAGG
CGGCGGGATTACCATCAAAGGGGCGGATTTCAACATCGCGACTCATGATGTCGTCGTGCGATATCTCACCTTCAGGCGGG
GGCCGGGCGGCGAGAATCATGCTGTGTCGGTATCCAAACACAACAGCAATGATGTTTACAATATTGTTGTGGATCATTGT
TCGATCAGCTGGGGCACCGACGAATGCCTGGGGCAGCAATACAGGGTTTACAATATGACGGCTTCGTGGAACATGATCTA
CGAGGGGCTCAACTGCAGCACCCATTCCAAAGGATGCCACAGCAAAGGGGGCATGTTTGCGGGGAGATACATGAACAACG
ACGCTACTGCCGGCGGTGCTTATAACATCACCCTTCATCACAATCTTCTGGCTCACAACGGAGACAGAAATCCCCTGTTC
GATTTAGCCGGCGCCGGACAGAGCGTCAACAACGTCACCTATAACGCGAAGTCCCGCACCCATTCGATTTACGATCGCGG
CGAATATACGAGGGCGGCGTATAATATTATCAAGAACTATTCGAAAGCCGGTCCCCACAGCGCGACAAAGCCCTATACCG
TTCAAGTCTGGAAATATACGCCGAATTCAATCTCCTTCGGCATGTATGTGGAGGGAAATATCGATTCATACAGAACTTCC
GATTCCCTGGCGCAGAATTTATGCGTGGAATCCGGATCGAGAGGATACCTGGCAGGAAGCAGATATTCTCAGCCTTCAAT
TAAGGAGACGTCGGCCGCGCAGGCCTATGCGGACGTTATTGCCGATGGCGGGGCGGGAAACAGCAGGATGCTCAATGCAG
ACGGCACCTGGACAAACCGGAGAGACGCCCATGATGCCAGGGTGATCAATGATGTTAAAAATGGAAAGGCTTCATACGGG
GACGGCCTGATTAATGATCCCTCGAACGTCGGCGGATGGCTGTCCATTTCAGCAGGTACAGGGTATAAGGATTCAGACCG
CGACGGGATGCCTGATGCGTGGGAAACCGCGAAAGGCCTCAATCCCAATAATGCGGCAGATGCGCGTCTGGATTCGAACG
GCAACGGATATTCGAATTTAGAGGAATTTTTAAACGGGAGCGGAAGCGCGGCGTCATCAACGACCTATTCAACGACCTCA
TCGCAGACAACCTCTTCTGTGCCGCCATCTTCCCCCAGCGGTCTGAAAGTTTCGCCGTAA

Upstream 100 bases:

>100_bases
CGGACCTGCTTTTGAAGGGCGGCTGTAAGGGGCGGTCTTCACCCCGACAGGCGCCTCCACAGATGCGGCTCGTGTCCCTG
GTGAGAGGAGAGAAAAGTTC

Downstream 100 bases:

>100_bases
GATCATCAGGGAGCGCCGGTCCGGAAAAACGGACCGGCGCATCATAAAAAAGAGAAAGGGCCTTTCCGCAACCAGAAGGG
AAACACCGCCGTTTCCTTCC

Product: pectate lyase

Products: NA

Alternate protein names: Pectinesterase; Pectate Lyase Protein; Fibronectin Type III Domain-Containing Protein; Polysaccharide Lyase Family; Outer Membrane Adhesin Like Proteiin; 50S Ribosomal Protein L; Ricin B Lectin; Pectate Lysase; PKD Domain Containing Protein; Pectate Lyase/Amb Allergen

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MKKIVKWMLMICLVLLPMESFAVVAFPGAEGYGANTIGGRGSSAGPYSFSVYEVTNLNDSGAGSLRAAVQASGPRFVIFK
TGGTITLSSTLNVSNPYITIAGQTAPGGGITIKGADFNIATHDVVVRYLTFRRGPGGENHAVSVSKHNSNDVYNIVVDHC
SISWGTDECLGQQYRVYNMTASWNMIYEGLNCSTHSKGCHSKGGMFAGRYMNNDATAGGAYNITLHHNLLAHNGDRNPLF
DLAGAGQSVNNVTYNAKSRTHSIYDRGEYTRAAYNIIKNYSKAGPHSATKPYTVQVWKYTPNSISFGMYVEGNIDSYRTS
DSLAQNLCVESGSRGYLAGSRYSQPSIKETSAAQAYADVIADGGAGNSRMLNADGTWTNRRDAHDARVINDVKNGKASYG
DGLINDPSNVGGWLSISAGTGYKDSDRDGMPDAWETAKGLNPNNAADARLDSNGNGYSNLEEFLNGSGSAASSTTYSTTS
SQTTSSVPPSSPSGLKVSP

Sequences:

>Translated_499_residues
MKKIVKWMLMICLVLLPMESFAVVAFPGAEGYGANTIGGRGSSAGPYSFSVYEVTNLNDSGAGSLRAAVQASGPRFVIFK
TGGTITLSSTLNVSNPYITIAGQTAPGGGITIKGADFNIATHDVVVRYLTFRRGPGGENHAVSVSKHNSNDVYNIVVDHC
SISWGTDECLGQQYRVYNMTASWNMIYEGLNCSTHSKGCHSKGGMFAGRYMNNDATAGGAYNITLHHNLLAHNGDRNPLF
DLAGAGQSVNNVTYNAKSRTHSIYDRGEYTRAAYNIIKNYSKAGPHSATKPYTVQVWKYTPNSISFGMYVEGNIDSYRTS
DSLAQNLCVESGSRGYLAGSRYSQPSIKETSAAQAYADVIADGGAGNSRMLNADGTWTNRRDAHDARVINDVKNGKASYG
DGLINDPSNVGGWLSISAGTGYKDSDRDGMPDAWETAKGLNPNNAADARLDSNGNGYSNLEEFLNGSGSAASSTTYSTTS
SQTTSSVPPSSPSGLKVSP
>Mature_499_residues
MKKIVKWMLMICLVLLPMESFAVVAFPGAEGYGANTIGGRGSSAGPYSFSVYEVTNLNDSGAGSLRAAVQASGPRFVIFK
TGGTITLSSTLNVSNPYITIAGQTAPGGGITIKGADFNIATHDVVVRYLTFRRGPGGENHAVSVSKHNSNDVYNIVVDHC
SISWGTDECLGQQYRVYNMTASWNMIYEGLNCSTHSKGCHSKGGMFAGRYMNNDATAGGAYNITLHHNLLAHNGDRNPLF
DLAGAGQSVNNVTYNAKSRTHSIYDRGEYTRAAYNIIKNYSKAGPHSATKPYTVQVWKYTPNSISFGMYVEGNIDSYRTS
DSLAQNLCVESGSRGYLAGSRYSQPSIKETSAAQAYADVIADGGAGNSRMLNADGTWTNRRDAHDARVINDVKNGKASYG
DGLINDPSNVGGWLSISAGTGYKDSDRDGMPDAWETAKGLNPNNAADARLDSNGNGYSNLEEFLNGSGSAASSTTYSTTS
SQTTSSVPPSSPSGLKVSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 4.2.2.2

Molecular weight: Translated: 52984; Mature: 52984

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIVKWMLMICLVLLPMESFAVVAFPGAEGYGANTIGGRGSSAGPYSFSVYEVTNLNDS
CHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC
GAGSLRAAVQASGPRFVIFKTGGTITLSSTLNVSNPYITIAGQTAPGGGITIKGADFNIA
CCCCEEEEEECCCCEEEEEECCCEEEEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCH
THDVVVRYLTFRRGPGGENHAVSVSKHNSNDVYNIVVDHCSISWGTDECLGQQYRVYNMT
HHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEEEEEECCCCCHHHCCCEEEEEEEE
ASWNMIYEGLNCSTHSKGCHSKGGMFAGRYMNNDATAGGAYNITLHHNLLAHNGDRNPLF
ECCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEEEECCCCCCEE
DLAGAGQSVNNVTYNAKSRTHSIYDRGEYTRAAYNIIKNYSKAGPHSATKPYTVQVWKYT
EECCCCCCCCCEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEC
PNSISFGMYVEGNIDSYRTSDSLAQNLCVESGSRGYLAGSRYSQPSIKETSAAQAYADVI
CCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHH
ADGGAGNSRMLNADGTWTNRRDAHDARVINDVKNGKASYGDGLINDPSNVGGWLSISAGT
CCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCC
GYKDSDRDGMPDAWETAKGLNPNNAADARLDSNGNGYSNLEEFLNGSGSAASSTTYSTTS
CCCCCCCCCCCCHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHCCCCCCCCCCEEECCC
SQTTSSVPPSSPSGLKVSP
CCCCCCCCCCCCCCCEECC
>Mature Secondary Structure
MKKIVKWMLMICLVLLPMESFAVVAFPGAEGYGANTIGGRGSSAGPYSFSVYEVTNLNDS
CHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC
GAGSLRAAVQASGPRFVIFKTGGTITLSSTLNVSNPYITIAGQTAPGGGITIKGADFNIA
CCCCEEEEEECCCCEEEEEECCCEEEEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCH
THDVVVRYLTFRRGPGGENHAVSVSKHNSNDVYNIVVDHCSISWGTDECLGQQYRVYNMT
HHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEEEEEECCCCCHHHCCCEEEEEEEE
ASWNMIYEGLNCSTHSKGCHSKGGMFAGRYMNNDATAGGAYNITLHHNLLAHNGDRNPLF
ECCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEEEECCCCCCEE
DLAGAGQSVNNVTYNAKSRTHSIYDRGEYTRAAYNIIKNYSKAGPHSATKPYTVQVWKYT
EECCCCCCCCCEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEC
PNSISFGMYVEGNIDSYRTSDSLAQNLCVESGSRGYLAGSRYSQPSIKETSAAQAYADVI
CCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHH
ADGGAGNSRMLNADGTWTNRRDAHDARVINDVKNGKASYGDGLINDPSNVGGWLSISAGT
CCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCC
GYKDSDRDGMPDAWETAKGLNPNNAADARLDSNGNGYSNLEEFLNGSGSAASSTTYSTTS
CCCCCCCCCCCCHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHCCCCCCCCCCEEECCC
SQTTSSVPPSSPSGLKVSP
CCCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA