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The map label for this gene is yloC [H]

Identifier: 85858120

GI number: 85858120

Start: 288783

End: 289667

Strand: Direct

Name: yloC [H]

Synonym: SYN_01278

Alternate gene names: 85858120

Gene position: 288783-289667 (Clockwise)

Preceding gene: 85858119

Following gene: 85858121

Centisome position: 9.08

GC content: 50.62

Gene sequence:

>885_bases
ATGATCAGCAGCATGACCGGTTACGGAAGGGCGGAATCCACAGAGGAGGAGAAAAAGGTCGTGGTTGAGATGAGATCGCT
CAATCATCGGTATCTGGAAGTTTCCCTGCGGCTGCCGAACCTCTTTCTTCCCCTGGAGATGGAGATCAAGAGAAAAATCG
GTGAGCATTTTTTCCGGGGACGGATCGATGTCAGCATTAAGATGGATTCAGACATCTGGACCGGAAATGGTGAAAGGTAT
ACCCTCAATCTGCCGCTGATAAAAAATTATCATTCTCTGCTTGGGGAAATGAAAAAGGAACTGGATCTTACAGAAGAGAT
TACACTGGGCATGCTGTCGCGCTTCAAGGATGTCTTCATCCCGGTGGAAACGGTTCCCGATCTGGAGGCCAGCTGGGCAA
GGGTGGAGCCGATCTTCAATGAAGCGATGGCCAACCTGGAGACCATGCGGAAGAAGGAAGGCGATATTCTCTATCGCGAC
TTGATGGTACGGATCGGACTGATCCGGAACTCCCTTGAGGAAATCATCAAAAGAACGCCCGTGCTTCTTGAGGAATATCA
CTCGCGTCTGGCAGCCCGGGTTCGGGAATTGACAAACGGCCTGGTGGTCGATGAGGCGCGCCTGGCACAGGAAGTGGCGG
TAATGGCGGAACGGAGCGATATTACGGAAGAAACCGTTCGCTTCCGCAGCCATCTCGAACAGTTTGAAACGATGATGAAC
AGCAAGGAAGCTGTGGGACGGAAGATCGATTTTCTCATTCAGGAAATGGGAAGGGAGATCAATACAATCGGATCCAAGAG
CAGTGATGCCCTGATTTCCCGGCAGGTTATCGAAATCAAGAGTGAACTGGCGAAACTGAGAGAGCAGGTGCAGAATATTG
AATAA

Upstream 100 bases:

>100_bases
GCTGAAGTTGCACGCGGTCAAAAAGGAGCGCGGCGGCGGGGTTGACGCAGCCCTTCCGCATTGCATCAGCGATGAATTTT
GAAGGATGGGGTGAAAAGTT

Downstream 100 bases:

>100_bases
AGCGGGTCAGGAAGCAAGAGGGTTTTTCATCGTTCTTTCCGCGGCATCGGGCACGGGAAAGACGTCGATACGCCGGATTT
TTCTTGAACGGTGTCCCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MISSMTGYGRAESTEEEKKVVVEMRSLNHRYLEVSLRLPNLFLPLEMEIKRKIGEHFFRGRIDVSIKMDSDIWTGNGERY
TLNLPLIKNYHSLLGEMKKELDLTEEITLGMLSRFKDVFIPVETVPDLEASWARVEPIFNEAMANLETMRKKEGDILYRD
LMVRIGLIRNSLEEIIKRTPVLLEEYHSRLAARVRELTNGLVVDEARLAQEVAVMAERSDITEETVRFRSHLEQFETMMN
SKEAVGRKIDFLIQEMGREINTIGSKSSDALISRQVIEIKSELAKLREQVQNIE

Sequences:

>Translated_294_residues
MISSMTGYGRAESTEEEKKVVVEMRSLNHRYLEVSLRLPNLFLPLEMEIKRKIGEHFFRGRIDVSIKMDSDIWTGNGERY
TLNLPLIKNYHSLLGEMKKELDLTEEITLGMLSRFKDVFIPVETVPDLEASWARVEPIFNEAMANLETMRKKEGDILYRD
LMVRIGLIRNSLEEIIKRTPVLLEEYHSRLAARVRELTNGLVVDEARLAQEVAVMAERSDITEETVRFRSHLEQFETMMN
SKEAVGRKIDFLIQEMGREINTIGSKSSDALISRQVIEIKSELAKLREQVQNIE
>Mature_294_residues
MISSMTGYGRAESTEEEKKVVVEMRSLNHRYLEVSLRLPNLFLPLEMEIKRKIGEHFFRGRIDVSIKMDSDIWTGNGERY
TLNLPLIKNYHSLLGEMKKELDLTEEITLGMLSRFKDVFIPVETVPDLEASWARVEPIFNEAMANLETMRKKEGDILYRD
LMVRIGLIRNSLEEIIKRTPVLLEEYHSRLAARVRELTNGLVVDEARLAQEVAVMAERSDITEETVRFRSHLEQFETMMN
SKEAVGRKIDFLIQEMGREINTIGSKSSDALISRQVIEIKSELAKLREQVQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=294, Percent_Identity=32.312925170068, Blast_Score=130, Evalue=7e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 34075; Mature: 34075

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISSMTGYGRAESTEEEKKVVVEMRSLNHRYLEVSLRLPNLFLPLEMEIKRKIGEHFFRG
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCEECCHHHHHHHHHHHHHHCC
RIDVSIKMDSDIWTGNGERYTLNLPLIKNYHSLLGEMKKELDLTEEITLGMLSRFKDVFI
CEEEEEEECCCEEECCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEE
PVETVPDLEASWARVEPIFNEAMANLETMRKKEGDILYRDLMVRIGLIRNSLEEIIKRTP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
VLLEEYHSRLAARVRELTNGLVVDEARLAQEVAVMAERSDITEETVRFRSHLEQFETMMN
HHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
SKEAVGRKIDFLIQEMGREINTIGSKSSDALISRQVIEIKSELAKLREQVQNIE
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MISSMTGYGRAESTEEEKKVVVEMRSLNHRYLEVSLRLPNLFLPLEMEIKRKIGEHFFRG
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCEECCHHHHHHHHHHHHHHCC
RIDVSIKMDSDIWTGNGERYTLNLPLIKNYHSLLGEMKKELDLTEEITLGMLSRFKDVFI
CEEEEEEECCCEEECCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEE
PVETVPDLEASWARVEPIFNEAMANLETMRKKEGDILYRDLMVRIGLIRNSLEEIIKRTP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
VLLEEYHSRLAARVRELTNGLVVDEARLAQEVAVMAERSDITEETVRFRSHLEQFETMMN
HHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
SKEAVGRKIDFLIQEMGREINTIGSKSSDALISRQVIEIKSELAKLREQVQNIE
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]