| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858112
Identifier: 85858112
GI number: 85858112
Start: 282364
End: 282621
Strand: Direct
Name: 85858112
Synonym: SYN_03253
Alternate gene names: NA
Gene position: 282364-282621 (Clockwise)
Preceding gene: 85858111
Following gene: 85858118
Centisome position: 8.88
GC content: 42.25
Gene sequence:
>258_bases TTGCATTCTTATTTTTCTTCATCATCTGCCTGTATCTATGGTTTTGATCCTGAAATTGTATCCGCTTGCCGATCAGGGAG CAGGGAATTCCGCCTTGAAATGTCATACGCCATGTATGAGACTTCCAAGATCAAAAATCTGCTTATAGAGCTACTTCGAA ATAGTCCGGCAATTATTCATGCGGCGGGCGCCACACAACTGGATTACAGTAACTCCTTTAACGATCTGCAGCTATTCCAA AGAAATCATCAGTTCTGA
Upstream 100 bases:
>100_bases ATGAACATGGTGGGAGGCTCCGGCTGCACCTCCTCGGGAAAAAGGTGAATCTGCCGTTTCTTTTTTGCCTTTTCTTTAGA CTTGGCCTGCCGTTTTACGA
Downstream 100 bases:
>100_bases CTTCCATTTCCTGAAACTGCCGGATCGAACCGCTTCGGATAAGGCATCGTAATCATTGGCGTGAGGAACTTGAACAGTAT CTCAGCGGTAATTTCTTGAA
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MHSYFSSSSACIYGFDPEIVSACRSGSREFRLEMSYAMYETSKIKNLLIELLRNSPAIIHAAGATQLDYSNSFNDLQLFQ RNHQF
Sequences:
>Translated_85_residues MHSYFSSSSACIYGFDPEIVSACRSGSREFRLEMSYAMYETSKIKNLLIELLRNSPAIIHAAGATQLDYSNSFNDLQLFQ RNHQF >Mature_85_residues MHSYFSSSSACIYGFDPEIVSACRSGSREFRLEMSYAMYETSKIKNLLIELLRNSPAIIHAAGATQLDYSNSFNDLQLFQ RNHQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9720; Mature: 9720
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSYFSSSSACIYGFDPEIVSACRSGSREFRLEMSYAMYETSKIKNLLIELLRNSPAIIH CCCCCCCCCCEEEECCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEE AAGATQLDYSNSFNDLQLFQRNHQF ECCCCCCCCCCCCCHHHHHHHCCCC >Mature Secondary Structure MHSYFSSSSACIYGFDPEIVSACRSGSREFRLEMSYAMYETSKIKNLLIELLRNSPAIIH CCCCCCCCCCEEEECCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEE AAGATQLDYSNSFNDLQLFQRNHQF ECCCCCCCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA