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The map label for this gene is yrbE [C]

Identifier: 85858103

GI number: 85858103

Start: 274984

End: 275838

Strand: Direct

Name: yrbE [C]

Synonym: SYN_01262

Alternate gene names: 85858103

Gene position: 274984-275838 (Clockwise)

Preceding gene: 85858099

Following gene: 85858104

Centisome position: 8.65

GC content: 56.02

Gene sequence:

>855_bases
GTGACCGTGGCGATGCGTCCGGATATTCAGGAAAGTTCCGAGGAAAAAGCAGGGTGGAATGCCATCAGGCTGCTGTCCTG
GCCGTTTGCCCAACTCGGAAGATCGGTGATCAGCTGGATCAACAATTCCGGGGCTGCGGCCATCTTCCTACTGCTCGCTG
CCCTGAAAATCTTCCGTCCCCGGCAGCTGATGAAGATCACTCAGCAGATCTATTATATCGGGGCGCGTTCCACGATGATT
ATCATGCTGGTCGGGCTTTTTACCGGCATGGTCCTGGGGCTCCAGTCCTACCATGCCCTGGTTCAGGTGGGCGCGGAAGG
GGCGCTCGGCACCCTCGTCGCCCTGTCGCTGATTCGGGAACTGGGCCCTGTTCTCACGGCGATCATGATAACCGCCAGGG
CCGGTTCGGCGATAACAGCCCAGATCGGTATTGAACGCATCTCGGAGCAGATTGACGCTCTTGACACCATGCACATTGAT
CCATTGAGATACCTCATCAGCCCGAGAATCGCGGCGGCAATCATCAGTTTTCCCGTGCTTACGGCGCTCTTTGACCTCAT
CGGCATACTGGGCAGTTACATTTCCGGGGTCCTGATCATGGGAGCGAATGCCGGCACCTTTTTTCATCGGGTTCAGTCCA
GCGTGGAAATGTCGGATGTCAACGAGGGATTTATCAAGGCCATTGTTTTTGCTGTTATCGTTTCCACCGTCTGCTGTTAT
CAGGGCTATTTTGCCCACATGCGTCCGGACAGCCACGGGGCCAAGGCCGTCGGCCTCTCCACAACCTCGGCCGTTGTGCT
TTCCTGCGTGCTGATTCTGGTATCGGATTACGTGGTCACTTCTCTTCTGATTTAG

Upstream 100 bases:

>100_bases
GAATTTCGTTTTGTCCAGTCGAGGAAACTTATTCTTGACTTGCGGCGCGGGGGATTGATATGCAGAACTGCTGTTTAAAA
AACTTGCTCGAACGGAGACC

Downstream 100 bases:

>100_bases
AGGAGCTTATGGATATACCATTGATTGAATTTCAGGACGTGACGAAACGCTTCGGAGACCGAACCGTTCTGGACCGGGTC
AACCTGAAGATCTATGAAGG

Product: organic solvents resistance ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MTVAMRPDIQESSEEKAGWNAIRLLSWPFAQLGRSVISWINNSGAAAIFLLLAALKIFRPRQLMKITQQIYYIGARSTMI
IMLVGLFTGMVLGLQSYHALVQVGAEGALGTLVALSLIRELGPVLTAIMITARAGSAITAQIGIERISEQIDALDTMHID
PLRYLISPRIAAAIISFPVLTALFDLIGILGSYISGVLIMGANAGTFFHRVQSSVEMSDVNEGFIKAIVFAVIVSTVCCY
QGYFAHMRPDSHGAKAVGLSTTSAVVLSCVLILVSDYVVTSLLI

Sequences:

>Translated_284_residues
MTVAMRPDIQESSEEKAGWNAIRLLSWPFAQLGRSVISWINNSGAAAIFLLLAALKIFRPRQLMKITQQIYYIGARSTMI
IMLVGLFTGMVLGLQSYHALVQVGAEGALGTLVALSLIRELGPVLTAIMITARAGSAITAQIGIERISEQIDALDTMHID
PLRYLISPRIAAAIISFPVLTALFDLIGILGSYISGVLIMGANAGTFFHRVQSSVEMSDVNEGFIKAIVFAVIVSTVCCY
QGYFAHMRPDSHGAKAVGLSTTSAVVLSCVLILVSDYVVTSLLI
>Mature_283_residues
TVAMRPDIQESSEEKAGWNAIRLLSWPFAQLGRSVISWINNSGAAAIFLLLAALKIFRPRQLMKITQQIYYIGARSTMII
MLVGLFTGMVLGLQSYHALVQVGAEGALGTLVALSLIRELGPVLTAIMITARAGSAITAQIGIERISEQIDALDTMHIDP
LRYLISPRIAAAIISFPVLTALFDLIGILGSYISGVLIMGANAGTFFHRVQSSVEMSDVNEGFIKAIVFAVIVSTVCCYQ
GYFAHMRPDSHGAKAVGLSTTSAVVLSCVLILVSDYVVTSLLI

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=258, Percent_Identity=40.6976744186046, Blast_Score=171, Evalue=4e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 30522; Mature: 30390

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVAMRPDIQESSEEKAGWNAIRLLSWPFAQLGRSVISWINNSGAAAIFLLLAALKIFRP
CCCCCCCCCCCCCHHHCCCHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
RQLMKITQQIYYIGARSTMIIMLVGLFTGMVLGLQSYHALVQVGAEGALGTLVALSLIRE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LGPVLTAIMITARAGSAITAQIGIERISEQIDALDTMHIDPLRYLISPRIAAAIISFPVL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
TALFDLIGILGSYISGVLIMGANAGTFFHRVQSSVEMSDVNEGFIKAIVFAVIVSTVCCY
HHHHHHHHHHHHHHHHEEHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGYFAHMRPDSHGAKAVGLSTTSAVVLSCVLILVSDYVVTSLLI
HHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TVAMRPDIQESSEEKAGWNAIRLLSWPFAQLGRSVISWINNSGAAAIFLLLAALKIFRP
CCCCCCCCCCCCHHHCCCHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
RQLMKITQQIYYIGARSTMIIMLVGLFTGMVLGLQSYHALVQVGAEGALGTLVALSLIRE
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LGPVLTAIMITARAGSAITAQIGIERISEQIDALDTMHIDPLRYLISPRIAAAIISFPVL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
TALFDLIGILGSYISGVLIMGANAGTFFHRVQSSVEMSDVNEGFIKAIVFAVIVSTVCCY
HHHHHHHHHHHHHHHHEEHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGYFAHMRPDSHGAKAVGLSTTSAVVLSCVLILVSDYVVTSLLI
HHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA