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The map label for this gene is 85858013

Identifier: 85858013

GI number: 85858013

Start: 174225

End: 175901

Strand: Direct

Name: 85858013

Synonym: SYN_02385

Alternate gene names: NA

Gene position: 174225-175901 (Clockwise)

Preceding gene: 85858011

Following gene: 85858015

Centisome position: 5.48

GC content: 55.1

Gene sequence:

>1677_bases
ATGGCAATTAATTACCGATTAAAAGAGGAGGAAGGTAGAATGGAATGGCCTAAAAGCAATGACGTGATAGGAACCGTAAA
CCGCGGCAATCCGGCTGAATCCGGGTTGTGCACTCTTTGCCGCTCGGATTGCAAAGGACGCTGCGAAACGTGGCTGTCAA
GTCTGAAAGGCAGAAAGATTCTTTATCCCAGGGATTTCGGGTTTGTAACGGCGGGCAGCGCGAACACCTGCCATCTCGGA
GTCTGTTATAACTCGCTCCGCATTCAGGGTTACAATTACGGTGTATCCGGGCTGCCCGCGGGACTGAGCAGCTCCGCCGA
CGACTGCATCTTTCCCAACGTCAATATCGAAGGTTCCTTCGGCAATGAGGTGAAAACGAAATTCCGTTTGCCCATCATGA
CCGGCGCCCTGGGTTCAACTTTTATTGCCGCCAAGTACTGGGATTCCTTTGCGACGGGCGCCGCCCTGGTGGGAATTCCC
ATCGTCATCGGCGAAAACGTGGTCGGCATCGACAAAGAGGCAGTCATCAATAACGGCAAGATCTCCAAAGCCCCCGAGCT
GGACCGGCGGATTGAAACCTTCCTCAAGTATTACGACGGCTACGGCGCCATCATTGTTCAGATGAATGTGGAAGATACGA
GAAACGGCGTGGCGGAATACGTCATCAACAAATACGGTGACAAGGCCATCATCGAGCTGAAATGGGGTCAGGGAGCCAAG
GATATCGGCGGTGAAATCCAGGTCGACAGCCTCGACTATGCCCTGTTTCTGAAGGAAAGGGGCTATGTCGTTGACCCCGA
TCCAGCGAAACCGGAAGTGCAGGAAGCCTTCAGGCACGGCGCCGTCAAATCCTTCGCCCGCCACAGCAGGCTGGGATATA
CCGACATGTCCTCGGTGGAAAAAGTAAGTGAATCCTTCATGGAATCCGTTGCGCATCTCCGCAGGCTCGGGTACAAGCGG
ATCTCGCTGAAGACAGGCTCCTACGGCATGGAAGCGCTGGCCATGGCCATCAAATACGCAACGGATGCGAAGCTGGATCT
GCTCACAGTCGATGGTTCCGGCGGCGGCACCGGCATGAGCCCCTGGAACATGATGGAGACCTGGGGAGTTCCTTCTATCC
TGCTGCATTCAAAGACCATTGAGTATGCGTCGATTCTGGCGGCTAAGGGCGACAAGGTCGTGGACATCGCCCTGGCGGGC
GGCCTGGCGCGGGAAGATCATATCTTCAAGGCCCTGGCTCTGGGCGCGCCCTACACCAAACTCGTCTGCATGGGGCGGGC
CGCGATGATTCCGGGTTTTCTGGGTTCCAACATCGAAGGTGTGCTGAAACCGGAACGGAAGGCAAAAGTGAACGGAAACT
GGGATGAACTGCCGATCTCCGTCAGGGAAATCGGCGCGTCGACGGAAGAGCTCTTCGCGGGGTATTATGATCTTCAGAAA
AAGGTGGGGGCGGACGAAATGAAAAACATCCCCTATGGCGCAATAGCCATGTGGACGCTCGCCGACAAACTTGCGGCAGG
ATTGCAGCAGTTGATGGCCGGGGCAAGGCGATTCGACCTCAGCCAGATTTCCAGGGGAGACGTTTTCTCCGCCAACAGGG
AAACTGAAAGAGAAACCAAGATTCCCTTCATTACCGATGTCCTGGATGAAAGCGCGAAGAAAATCCTCAACAGTTGA

Upstream 100 bases:

>100_bases
TGCCGAAAAACAATTCAAAATATTTCTTGACAGTCCTTAAGTGCATTGTTAATACGCACCTTACATTAAGATTTGCAAAT
GGCAATAGCTTGCCGGTATT

Downstream 100 bases:

>100_bases
ACTTCTTCTCTCTGCTGAAAAGCCCTGCAAGGGGCGTTGTCGAATTCAGGAAAGGCAGATTGGCGGTAAACGCTTCTCTG
CCTTTCTTCATTCTGGCCGT

Product: glutamate synthase [NADPH] small chain

Products: NA

Alternate protein names: Glutamate Synthase-Related Protein; Glutamate Synthase-Like Protein; Glutamate Synthase -Like Protein; Glutamate Synthase GltB2 Subunit; Glutamate Synthase; Glutamate Synthase Subunit; Glutamate Synthase Domain Protein

Number of amino acids: Translated: 558; Mature: 557

Protein sequence:

>558_residues
MAINYRLKEEEGRMEWPKSNDVIGTVNRGNPAESGLCTLCRSDCKGRCETWLSSLKGRKILYPRDFGFVTAGSANTCHLG
VCYNSLRIQGYNYGVSGLPAGLSSSADDCIFPNVNIEGSFGNEVKTKFRLPIMTGALGSTFIAAKYWDSFATGAALVGIP
IVIGENVVGIDKEAVINNGKISKAPELDRRIETFLKYYDGYGAIIVQMNVEDTRNGVAEYVINKYGDKAIIELKWGQGAK
DIGGEIQVDSLDYALFLKERGYVVDPDPAKPEVQEAFRHGAVKSFARHSRLGYTDMSSVEKVSESFMESVAHLRRLGYKR
ISLKTGSYGMEALAMAIKYATDAKLDLLTVDGSGGGTGMSPWNMMETWGVPSILLHSKTIEYASILAAKGDKVVDIALAG
GLAREDHIFKALALGAPYTKLVCMGRAAMIPGFLGSNIEGVLKPERKAKVNGNWDELPISVREIGASTEELFAGYYDLQK
KVGADEMKNIPYGAIAMWTLADKLAAGLQQLMAGARRFDLSQISRGDVFSANRETERETKIPFITDVLDESAKKILNS

Sequences:

>Translated_558_residues
MAINYRLKEEEGRMEWPKSNDVIGTVNRGNPAESGLCTLCRSDCKGRCETWLSSLKGRKILYPRDFGFVTAGSANTCHLG
VCYNSLRIQGYNYGVSGLPAGLSSSADDCIFPNVNIEGSFGNEVKTKFRLPIMTGALGSTFIAAKYWDSFATGAALVGIP
IVIGENVVGIDKEAVINNGKISKAPELDRRIETFLKYYDGYGAIIVQMNVEDTRNGVAEYVINKYGDKAIIELKWGQGAK
DIGGEIQVDSLDYALFLKERGYVVDPDPAKPEVQEAFRHGAVKSFARHSRLGYTDMSSVEKVSESFMESVAHLRRLGYKR
ISLKTGSYGMEALAMAIKYATDAKLDLLTVDGSGGGTGMSPWNMMETWGVPSILLHSKTIEYASILAAKGDKVVDIALAG
GLAREDHIFKALALGAPYTKLVCMGRAAMIPGFLGSNIEGVLKPERKAKVNGNWDELPISVREIGASTEELFAGYYDLQK
KVGADEMKNIPYGAIAMWTLADKLAAGLQQLMAGARRFDLSQISRGDVFSANRETERETKIPFITDVLDESAKKILNS
>Mature_557_residues
AINYRLKEEEGRMEWPKSNDVIGTVNRGNPAESGLCTLCRSDCKGRCETWLSSLKGRKILYPRDFGFVTAGSANTCHLGV
CYNSLRIQGYNYGVSGLPAGLSSSADDCIFPNVNIEGSFGNEVKTKFRLPIMTGALGSTFIAAKYWDSFATGAALVGIPI
VIGENVVGIDKEAVINNGKISKAPELDRRIETFLKYYDGYGAIIVQMNVEDTRNGVAEYVINKYGDKAIIELKWGQGAKD
IGGEIQVDSLDYALFLKERGYVVDPDPAKPEVQEAFRHGAVKSFARHSRLGYTDMSSVEKVSESFMESVAHLRRLGYKRI
SLKTGSYGMEALAMAIKYATDAKLDLLTVDGSGGGTGMSPWNMMETWGVPSILLHSKTIEYASILAAKGDKVVDIALAGG
LAREDHIFKALALGAPYTKLVCMGRAAMIPGFLGSNIEGVLKPERKAKVNGNWDELPISVREIGASTEELFAGYYDLQKK
VGADEMKNIPYGAIAMWTLADKLAAGLQQLMAGARRFDLSQISRGDVFSANRETERETKIPFITDVLDESAKKILNS

Specific function: Unknown

COG id: COG0069

COG function: function code E; Glutamate synthase domain 2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60847; Mature: 60716

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAINYRLKEEEGRMEWPKSNDVIGTVNRGNPAESGLCTLCRSDCKGRCETWLSSLKGRKI
CCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCEE
LYPRDFGFVTAGSANTCHLGVCYNSLRIQGYNYGVSGLPAGLSSSADDCIFPNVNIEGSF
ECCCCCCEEECCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCC
GNEVKTKFRLPIMTGALGSTFIAAKYWDSFATGAALVGIPIVIGENVVGIDKEAVINNGK
CCCCCEEEECEEEECCCCHHHHHHHHHHHHHCCCHHEEEEEEECCCEECCCHHHHCCCCC
ISKAPELDRRIETFLKYYDGYGAIIVQMNVEDTRNGVAEYVINKYGDKAIIELKWGQGAK
CCCCCHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCCC
DIGGEIQVDSLDYALFLKERGYVVDPDPAKPEVQEAFRHGAVKSFARHSRLGYTDMSSVE
CCCCEEEECCCCEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
KVSESFMESVAHLRRLGYKRISLKTGSYGMEALAMAIKYATDAKLDLLTVDGSGGGTGMS
HHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCC
PWNMMETWGVPSILLHSKTIEYASILAAKGDKVVDIALAGGLAREDHIFKALALGAPYTK
CCHHHHHCCCCEEEEECCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCHHH
LVCMGRAAMIPGFLGSNIEGVLKPERKAKVNGNWDELPISVREIGASTEELFAGYYDLQK
HHHHCCHHHCCCHHCCCCCEEECCCHHCCCCCCHHHCCEEHHHHCCCHHHHHHHHHHHHH
KVGADEMKNIPYGAIAMWTLADKLAAGLQQLMAGARRFDLSQISRGDVFSANRETERETK
HCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHCC
IPFITDVLDESAKKILNS
CCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AINYRLKEEEGRMEWPKSNDVIGTVNRGNPAESGLCTLCRSDCKGRCETWLSSLKGRKI
CEEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCEE
LYPRDFGFVTAGSANTCHLGVCYNSLRIQGYNYGVSGLPAGLSSSADDCIFPNVNIEGSF
ECCCCCCEEECCCCCEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCC
GNEVKTKFRLPIMTGALGSTFIAAKYWDSFATGAALVGIPIVIGENVVGIDKEAVINNGK
CCCCCEEEECEEEECCCCHHHHHHHHHHHHHCCCHHEEEEEEECCCEECCCHHHHCCCCC
ISKAPELDRRIETFLKYYDGYGAIIVQMNVEDTRNGVAEYVINKYGDKAIIELKWGQGAK
CCCCCHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCCC
DIGGEIQVDSLDYALFLKERGYVVDPDPAKPEVQEAFRHGAVKSFARHSRLGYTDMSSVE
CCCCEEEECCCCEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
KVSESFMESVAHLRRLGYKRISLKTGSYGMEALAMAIKYATDAKLDLLTVDGSGGGTGMS
HHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCC
PWNMMETWGVPSILLHSKTIEYASILAAKGDKVVDIALAGGLAREDHIFKALALGAPYTK
CCHHHHHCCCCEEEEECCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCHHH
LVCMGRAAMIPGFLGSNIEGVLKPERKAKVNGNWDELPISVREIGASTEELFAGYYDLQK
HHHHCCHHHCCCHHCCCCCEEECCCHHCCCCCCHHHCCEEHHHHCCCHHHHHHHHHHHHH
KVGADEMKNIPYGAIAMWTLADKLAAGLQQLMAGARRFDLSQISRGDVFSANRETERETK
HCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCHHCC
IPFITDVLDESAKKILNS
CCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA