| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858002
Identifier: 85858002
GI number: 85858002
Start: 166506
End: 166835
Strand: Direct
Name: 85858002
Synonym: SYN_00843
Alternate gene names: NA
Gene position: 166506-166835 (Clockwise)
Preceding gene: 85857998
Following gene: 85858009
Centisome position: 5.24
GC content: 49.7
Gene sequence:
>330_bases GTGCCGTTATGTTTCATCCTGGAAATATTTAAAGTCAAACTTCACAGGCATGCCCTTTCACCCGGGCGGAATCCTGCTTG GAGACTTCCTGAATCCCATGGGAATTACACAACACAGACTTGCGAAATCCCTGGGGTATCCAAGCGGCATATTGGTGAAA TCATCACCGGCAAGCGTTCCATAACGGCGGACACGGCCTTGCGACCGGCCATTTTTTCCGGCACAGATCCCCAAAGCTGG ATGAACTTCCAGACCCATTATGGCTTGACGGTTGCCGAAGAGAATCTCTCCGAGAGACTGAAAATTGAAGTGGTAAGATA CGCTGTGTAA
Upstream 100 bases:
>100_bases ACTTCCCGCGTATTCATCAGTGTTTCTGACATACCCCTTTGCCTCTTTTTATTTTCAATCGCCGTTTTGTCTGTTAGTGG TTCAATTCCCCTGAAATGAT
Downstream 100 bases:
>100_bases GGGAATTCTTTATCCCTTATGAATAATCGTTCCTACATGTTCACCCTTCAGGGCCCGGGTGATATTGCCTTGCTTCTGGC CGTTGATGATCTGGATGCTG
Product: plasmid maintenance system antidote protein
Products: NA
Alternate protein names: Plasmid Maintenance System Antidote Protein XRE Family
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MPLCFILEIFKVKLHRHALSPGRNPAWRLPESHGNYTTQTCEIPGVSKRHIGEIITGKRSITADTALRPAIFSGTDPQSW MNFQTHYGLTVAEENLSERLKIEVVRYAV
Sequences:
>Translated_109_residues MPLCFILEIFKVKLHRHALSPGRNPAWRLPESHGNYTTQTCEIPGVSKRHIGEIITGKRSITADTALRPAIFSGTDPQSW MNFQTHYGLTVAEENLSERLKIEVVRYAV >Mature_108_residues PLCFILEIFKVKLHRHALSPGRNPAWRLPESHGNYTTQTCEIPGVSKRHIGEIITGKRSITADTALRPAIFSGTDPQSWM NFQTHYGLTVAEENLSERLKIEVVRYAV
Specific function: Unknown
COG id: COG3093
COG function: function code R; Plasmid maintenance system antidote protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12345; Mature: 12214
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLCFILEIFKVKLHRHALSPGRNPAWRLPESHGNYTTQTCEIPGVSKRHIGEIITGKRS CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCC ITADTALRPAIFSGTDPQSWMNFQTHYGLTVAEENLSERLKIEVVRYAV CCCCCCCCCEEECCCCCHHHHCCCCCCCEEEECCCHHHHHEEEEEEECC >Mature Secondary Structure PLCFILEIFKVKLHRHALSPGRNPAWRLPESHGNYTTQTCEIPGVSKRHIGEIITGKRS CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCC ITADTALRPAIFSGTDPQSWMNFQTHYGLTVAEENLSERLKIEVVRYAV CCCCCCCCCEEECCCCCHHHHCCCCCCCEEEECCCHHHHHEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA