Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85857858

Identifier: 85857858

GI number: 85857858

Start: 14771

End: 15532

Strand: Direct

Name: 85857858

Synonym: SYN_02040

Alternate gene names: NA

Gene position: 14771-15532 (Clockwise)

Preceding gene: 85857857

Following gene: 85857863

Centisome position: 0.46

GC content: 60.5

Gene sequence:

>762_bases
TTGGAGGGACTTTCGGAAAACCTCATCAAGTACGGCAAGCGGGGAAATGCTATGAACATGATCGGGATCGTGGAGGCTGT
GGGCGGCAGGTTCTCCCGGGAACTGGGCATCGACCTCGAAGGGGGGCGGTCAGGCGAAATCTTCAAATGGTTCCTCGCCT
CGGTTCTTTTCGGCGCCCGGATCTCCGAGACCATCGTGAAACACACGTTCCGGGCCTTCGAACAGGCAGGCGTCACGACA
CCGGAGAAGATCGAGCGCACCGGGTGGGACGGCCTGGTGTCGATCCTGGACCGCGGCGGCTATGTCCGGTATGATTTCAA
GACCGCAACCAAGCTGCTCGAACTCTGCAGGACGCTCCGGGAGCGCTATCAGAACGACCTCGGCCGGCTGCATGCGGAAG
CATCGGACCCCCGGGACTTGGAGGAGCGGCTCAAGGCATTGACGAAGGGCATCGGCAACGTGACCGTGACCATCTTTCTA
CGCGAGCTGCGCGGAATCTGGAAGAAGGCACGGCCACTGCCCTCGGACCTGGTCATGCTGGCTGCCGGAAACCTTGGTCT
CATTTCCAGTACCGATGAACGCGAGCAGGCCCTTGCTCTGTTGCAGGAGCGGTGGATGGAAAGCGGGGGAAGGGAAAAGG
ACTTTCCCGATTGTGAATCCGCCCTGCTGCGCGTCGGGAAGAACTACTGCCGGAAAAAGATATGCGATGCGTGCCCTGCC
CGGACTGCATGCAGGTCGGCAGCGACAACCGGCAGATATTAA

Upstream 100 bases:

>100_bases
ACTCCTCGACGAGTCTATCATTGCGCGGATCGTGACGGCGGTTGCGGGGTTCAGCTTTCAGTCTCCAGAGTAATTCAAAA
GGGGCTTGTGGTGATAGCCA

Downstream 100 bases:

>100_bases
AGCCGTGGCACCGACAGCAGTCACAGCCGCTTCAATCCTTAAAATAAAGAAGGGAGGCATAAAAGATGCCCCCCCTTCTT
ACATGTTTTGCCGCAATCAA

Product: cytoplasmic protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MEGLSENLIKYGKRGNAMNMIGIVEAVGGRFSRELGIDLEGGRSGEIFKWFLASVLFGARISETIVKHTFRAFEQAGVTT
PEKIERTGWDGLVSILDRGGYVRYDFKTATKLLELCRTLRERYQNDLGRLHAEASDPRDLEERLKALTKGIGNVTVTIFL
RELRGIWKKARPLPSDLVMLAAGNLGLISSTDEREQALALLQERWMESGGREKDFPDCESALLRVGKNYCRKKICDACPA
RTACRSAATTGRY

Sequences:

>Translated_253_residues
MEGLSENLIKYGKRGNAMNMIGIVEAVGGRFSRELGIDLEGGRSGEIFKWFLASVLFGARISETIVKHTFRAFEQAGVTT
PEKIERTGWDGLVSILDRGGYVRYDFKTATKLLELCRTLRERYQNDLGRLHAEASDPRDLEERLKALTKGIGNVTVTIFL
RELRGIWKKARPLPSDLVMLAAGNLGLISSTDEREQALALLQERWMESGGREKDFPDCESALLRVGKNYCRKKICDACPA
RTACRSAATTGRY
>Mature_253_residues
MEGLSENLIKYGKRGNAMNMIGIVEAVGGRFSRELGIDLEGGRSGEIFKWFLASVLFGARISETIVKHTFRAFEQAGVTT
PEKIERTGWDGLVSILDRGGYVRYDFKTATKLLELCRTLRERYQNDLGRLHAEASDPRDLEERLKALTKGIGNVTVTIFL
RELRGIWKKARPLPSDLVMLAAGNLGLISSTDEREQALALLQERWMESGGREKDFPDCESALLRVGKNYCRKKICDACPA
RTACRSAATTGRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28296; Mature: 28296

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGLSENLIKYGKRGNAMNMIGIVEAVGGRFSRELGIDLEGGRSGEIFKWFLASVLFGAR
CCCHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
ISETIVKHTFRAFEQAGVTTPEKIERTGWDGLVSILDRGGYVRYDFKTATKLLELCRTLR
HHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHH
ERYQNDLGRLHAEASDPRDLEERLKALTKGIGNVTVTIFLRELRGIWKKARPLPSDLVML
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AAGNLGLISSTDEREQALALLQERWMESGGREKDFPDCESALLRVGKNYCRKKICDACPA
HCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH
RTACRSAATTGRY
HHHHHHHHCCCCC
>Mature Secondary Structure
MEGLSENLIKYGKRGNAMNMIGIVEAVGGRFSRELGIDLEGGRSGEIFKWFLASVLFGAR
CCCHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
ISETIVKHTFRAFEQAGVTTPEKIERTGWDGLVSILDRGGYVRYDFKTATKLLELCRTLR
HHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHH
ERYQNDLGRLHAEASDPRDLEERLKALTKGIGNVTVTIFLRELRGIWKKARPLPSDLVML
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AAGNLGLISSTDEREQALALLQERWMESGGREKDFPDCESALLRVGKNYCRKKICDACPA
HCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH
RTACRSAATTGRY
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA