| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85857858
Identifier: 85857858
GI number: 85857858
Start: 14771
End: 15532
Strand: Direct
Name: 85857858
Synonym: SYN_02040
Alternate gene names: NA
Gene position: 14771-15532 (Clockwise)
Preceding gene: 85857857
Following gene: 85857863
Centisome position: 0.46
GC content: 60.5
Gene sequence:
>762_bases TTGGAGGGACTTTCGGAAAACCTCATCAAGTACGGCAAGCGGGGAAATGCTATGAACATGATCGGGATCGTGGAGGCTGT GGGCGGCAGGTTCTCCCGGGAACTGGGCATCGACCTCGAAGGGGGGCGGTCAGGCGAAATCTTCAAATGGTTCCTCGCCT CGGTTCTTTTCGGCGCCCGGATCTCCGAGACCATCGTGAAACACACGTTCCGGGCCTTCGAACAGGCAGGCGTCACGACA CCGGAGAAGATCGAGCGCACCGGGTGGGACGGCCTGGTGTCGATCCTGGACCGCGGCGGCTATGTCCGGTATGATTTCAA GACCGCAACCAAGCTGCTCGAACTCTGCAGGACGCTCCGGGAGCGCTATCAGAACGACCTCGGCCGGCTGCATGCGGAAG CATCGGACCCCCGGGACTTGGAGGAGCGGCTCAAGGCATTGACGAAGGGCATCGGCAACGTGACCGTGACCATCTTTCTA CGCGAGCTGCGCGGAATCTGGAAGAAGGCACGGCCACTGCCCTCGGACCTGGTCATGCTGGCTGCCGGAAACCTTGGTCT CATTTCCAGTACCGATGAACGCGAGCAGGCCCTTGCTCTGTTGCAGGAGCGGTGGATGGAAAGCGGGGGAAGGGAAAAGG ACTTTCCCGATTGTGAATCCGCCCTGCTGCGCGTCGGGAAGAACTACTGCCGGAAAAAGATATGCGATGCGTGCCCTGCC CGGACTGCATGCAGGTCGGCAGCGACAACCGGCAGATATTAA
Upstream 100 bases:
>100_bases ACTCCTCGACGAGTCTATCATTGCGCGGATCGTGACGGCGGTTGCGGGGTTCAGCTTTCAGTCTCCAGAGTAATTCAAAA GGGGCTTGTGGTGATAGCCA
Downstream 100 bases:
>100_bases AGCCGTGGCACCGACAGCAGTCACAGCCGCTTCAATCCTTAAAATAAAGAAGGGAGGCATAAAAGATGCCCCCCCTTCTT ACATGTTTTGCCGCAATCAA
Product: cytoplasmic protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MEGLSENLIKYGKRGNAMNMIGIVEAVGGRFSRELGIDLEGGRSGEIFKWFLASVLFGARISETIVKHTFRAFEQAGVTT PEKIERTGWDGLVSILDRGGYVRYDFKTATKLLELCRTLRERYQNDLGRLHAEASDPRDLEERLKALTKGIGNVTVTIFL RELRGIWKKARPLPSDLVMLAAGNLGLISSTDEREQALALLQERWMESGGREKDFPDCESALLRVGKNYCRKKICDACPA RTACRSAATTGRY
Sequences:
>Translated_253_residues MEGLSENLIKYGKRGNAMNMIGIVEAVGGRFSRELGIDLEGGRSGEIFKWFLASVLFGARISETIVKHTFRAFEQAGVTT PEKIERTGWDGLVSILDRGGYVRYDFKTATKLLELCRTLRERYQNDLGRLHAEASDPRDLEERLKALTKGIGNVTVTIFL RELRGIWKKARPLPSDLVMLAAGNLGLISSTDEREQALALLQERWMESGGREKDFPDCESALLRVGKNYCRKKICDACPA RTACRSAATTGRY >Mature_253_residues MEGLSENLIKYGKRGNAMNMIGIVEAVGGRFSRELGIDLEGGRSGEIFKWFLASVLFGARISETIVKHTFRAFEQAGVTT PEKIERTGWDGLVSILDRGGYVRYDFKTATKLLELCRTLRERYQNDLGRLHAEASDPRDLEERLKALTKGIGNVTVTIFL RELRGIWKKARPLPSDLVMLAAGNLGLISSTDEREQALALLQERWMESGGREKDFPDCESALLRVGKNYCRKKICDACPA RTACRSAATTGRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28296; Mature: 28296
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGLSENLIKYGKRGNAMNMIGIVEAVGGRFSRELGIDLEGGRSGEIFKWFLASVLFGAR CCCHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH ISETIVKHTFRAFEQAGVTTPEKIERTGWDGLVSILDRGGYVRYDFKTATKLLELCRTLR HHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHH ERYQNDLGRLHAEASDPRDLEERLKALTKGIGNVTVTIFLRELRGIWKKARPLPSDLVML HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH AAGNLGLISSTDEREQALALLQERWMESGGREKDFPDCESALLRVGKNYCRKKICDACPA HCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH RTACRSAATTGRY HHHHHHHHCCCCC >Mature Secondary Structure MEGLSENLIKYGKRGNAMNMIGIVEAVGGRFSRELGIDLEGGRSGEIFKWFLASVLFGAR CCCHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH ISETIVKHTFRAFEQAGVTTPEKIERTGWDGLVSILDRGGYVRYDFKTATKLLELCRTLR HHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHH ERYQNDLGRLHAEASDPRDLEERLKALTKGIGNVTVTIFLRELRGIWKKARPLPSDLVML HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH AAGNLGLISSTDEREQALALLQERWMESGGREKDFPDCESALLRVGKNYCRKKICDACPA HCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH RTACRSAATTGRY HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA