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The map label for this gene is fdxB [H]

Identifier: 85375815

GI number: 85375815

Start: 3012698

End: 3013024

Strand: Reverse

Name: fdxB [H]

Synonym: ELI_14940

Alternate gene names: 85375815

Gene position: 3013024-3012698 (Counterclockwise)

Preceding gene: 85375816

Following gene: 85375814

Centisome position: 98.71

GC content: 54.43

Gene sequence:

>327_bases
ATGATCAAAATTACGTTCGTGGCTAGCGATGGTGAGCGACGGGAGGTCGAAATAGAAGAAGGCGAGACAGCCAGGGAAGC
GGCGCTATACAATGACGTGCCGGGTATCGATGGCGATTGCGGAGGGGTATGTGCTTGCGCGACCTGTCATGTGCATGTCG
ATCCCGAATGGATCGACAAGGTGGGTCGGCTTATGCATGATGGAATGGAGGCCGACCTCTTGCAGTTCGCCGAAGGCACC
ACTGAATACAGTCGCCTTGCCTGCCAGATTCCGATGAAGCCGATGCTGGATGGATTGGTTCTTCACCTACCCGAACAACA
ATACTGA

Upstream 100 bases:

>100_bases
GAACCAGAGCGTCTTTTTTCAAACCTCGTCCGCGGAATCACCAGGCTGCCGGTGCGGCTCCGCGCCCGCTGACTCTCGAG
ATCGAAATGCGGAGTTCAAG

Downstream 100 bases:

>100_bases
CGGAGGGATTTTCGTCCCCGTAGCCTACATTCTTATCTGTCTTTCCTCGATTCTTTGAGAAAACGCCCATGGCCACACAA
ATTGAGCCCGCAACCCAGAC

Product: ferredoxin, 2Fe-2S

Products: NA

Alternate protein names: FdII [H]

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MIKITFVASDGERREVEIEEGETAREAALYNDVPGIDGDCGGVCACATCHVHVDPEWIDKVGRLMHDGMEADLLQFAEGT
TEYSRLACQIPMKPMLDGLVLHLPEQQY

Sequences:

>Translated_108_residues
MIKITFVASDGERREVEIEEGETAREAALYNDVPGIDGDCGGVCACATCHVHVDPEWIDKVGRLMHDGMEADLLQFAEGT
TEYSRLACQIPMKPMLDGLVLHLPEQQY
>Mature_108_residues
MIKITFVASDGERREVEIEEGETAREAALYNDVPGIDGDCGGVCACATCHVHVDPEWIDKVGRLMHDGMEADLLQFAEGT
TEYSRLACQIPMKPMLDGLVLHLPEQQY

Specific function: Unknown

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17544202, Length=104, Percent_Identity=34.6153846153846, Blast_Score=65, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6325004, Length=104, Percent_Identity=44.2307692307692, Blast_Score=86, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 11952; Mature: 11952

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
9.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKITFVASDGERREVEIEEGETAREAALYNDVPGIDGDCGGVCACATCHVHVDPEWIDK
CEEEEEEECCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECHHHHHH
VGRLMHDGMEADLLQFAEGTTEYSRLACQIPMKPMLDGLVLHLPEQQY
HHHHHHCCCHHHHHHHHCCCCCHHHEEEECCCHHHHCCEEEECCCCCC
>Mature Secondary Structure
MIKITFVASDGERREVEIEEGETAREAALYNDVPGIDGDCGGVCACATCHVHVDPEWIDK
CEEEEEEECCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECHHHHHH
VGRLMHDGMEADLLQFAEGTTEYSRLACQIPMKPMLDGLVLHLPEQQY
HHHHHHCCCHHHHHHHHCCCCCHHHEEEECCCHHHHCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7751304; 11259647 [H]