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The map label for this gene is traB [H]

Identifier: 85375795

GI number: 85375795

Start: 2995290

End: 2996606

Strand: Reverse

Name: traB [H]

Synonym: ELI_14840

Alternate gene names: 85375795

Gene position: 2996606-2995290 (Counterclockwise)

Preceding gene: 85375796

Following gene: 85375794

Centisome position: 98.17

GC content: 66.06

Gene sequence:

>1317_bases
ATGGCCGAGGCAACACAGAAGGACACCGAAAAGAGGCCGCTGCCGGGCTCGCCGGAAGCGCGCGAGAGCGGACGGCGCAA
CCTCAATTCGCAGATCGCGCAGCGCCAGAAGATGCTGCTCGCCGGGATCGGAGCCATCGCGCTCATCGGCGGCGGGATGT
TCATCTTCGGCGGCGATGGCGACGAGGGCGGCAGTGATGCCAATGGTGCGGCGACAATCGACACCGGCGGCCTCGTCAAT
CGCAACCTCTCGCAGCGCGAGTTCGTCGCGAGCTACGGTAACCGGCTCGATGCACAGGGCCGCGCGATCAAGGATCTGCA
GCAAACGCAGTTGCCACGCCCCGAGATCGAACAGGAACTCGAAGCCCTGCGCAGCGAAAACGCGCAGATGCGCTCCGACG
GTCAGGCAGCGATCGACGCGATCTCGGCTGAGAACGCCAATCTGCGTTCACAGCTGAGCGAAGCCGCGAAGGCACCTGCA
ACCGCTCCACCCTTGCCGCCGCCACCGGCATATGGCCCCGGCGTCGGCACCCGCAGAGCTGCCCAGCCACCACAAGGAGC
GCCGGAAACGCAGGGCGGGCAGCTCAGCCTGATGAGTTTCGGCGCGGAGACGGGCAAGGACGGCAAGCCGCGCGCGGCAG
AGACTGCGCCAGCTTTGCTGCTCGAAGCGAGCCGCGATTACCTGCCGCCCAACAGCTACGCACCGGCAACGGTCATCGTG
GGCGTCGACGCCTCGACCGGCGTTGCCAGCCAGAGCGATCCGCTTCCCGTGGTGCTCCGGATCACCGGACCGGCCCGCTC
GGTCATGCGCGGCAACAAGCTGCTCACAACCGACATTACCGGCTGCCTCGTCAATGGCGCGGCGCGCGGCGATCTCTCGG
CCGAGAAGGTGTACGTCAAGCTGGTGCGCATGACCTGCGCGCAGCCCGGTGGCCGCTTCGCCGTGAGCGAGGTCAAGGGG
TTCATCTCCTTTGCCGGAAGGTCGGGTGTGCGTGGCCGCGTGGTCAGCCGCGAAGGCAGCCTTGTCAGCCAGGCACTGCT
GGCCGGGATCGTTGGCGGCTTCGGACGCGGCTTTTCCGCCAACGCCAACGGTATCTTTGCAGGACAGGTGGGCAGCGACG
GCCAGCGCGAAGCGCTCTCTCCAACCGACATTCTTGCAGGCGGCTTCGGCCAGGGAGCCGGCGAAGCCGCCGACACGGTC
TCCCGCTACCTCATTGAACGCGCAGAACAATATCAACCAGTCGTCGAGATGCCGACCGGCATCGAAGTCGAAATCGTCTT
TCTCGACGGCGTCCATGTCAGGAGCTCTTCTAAATGA

Upstream 100 bases:

>100_bases
GTCCCGCAGGTGCGCTCGCCTTTGCCTATGGCCGCGATGCACTCGCTCCCGGTGAAGCGACCAGTGCCTTCCTTGTCTTT
GCCAGGGGAGGGCTCGACTG

Downstream 100 bases:

>100_bases
ACTACAATGATCACCGGCCGGGCCTGAAGGCCCGCGCCGCCCACCTTGCGCTTGCCTGCTCGGGTGCCGCTGCATTGCTG
ACACTCGGGGTCTCGGCTGT

Product: pilus assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MAEATQKDTEKRPLPGSPEARESGRRNLNSQIAQRQKMLLAGIGAIALIGGGMFIFGGDGDEGGSDANGAATIDTGGLVN
RNLSQREFVASYGNRLDAQGRAIKDLQQTQLPRPEIEQELEALRSENAQMRSDGQAAIDAISAENANLRSQLSEAAKAPA
TAPPLPPPPAYGPGVGTRRAAQPPQGAPETQGGQLSLMSFGAETGKDGKPRAAETAPALLLEASRDYLPPNSYAPATVIV
GVDASTGVASQSDPLPVVLRITGPARSVMRGNKLLTTDITGCLVNGAARGDLSAEKVYVKLVRMTCAQPGGRFAVSEVKG
FISFAGRSGVRGRVVSREGSLVSQALLAGIVGGFGRGFSANANGIFAGQVGSDGQREALSPTDILAGGFGQGAGEAADTV
SRYLIERAEQYQPVVEMPTGIEVEIVFLDGVHVRSSSK

Sequences:

>Translated_438_residues
MAEATQKDTEKRPLPGSPEARESGRRNLNSQIAQRQKMLLAGIGAIALIGGGMFIFGGDGDEGGSDANGAATIDTGGLVN
RNLSQREFVASYGNRLDAQGRAIKDLQQTQLPRPEIEQELEALRSENAQMRSDGQAAIDAISAENANLRSQLSEAAKAPA
TAPPLPPPPAYGPGVGTRRAAQPPQGAPETQGGQLSLMSFGAETGKDGKPRAAETAPALLLEASRDYLPPNSYAPATVIV
GVDASTGVASQSDPLPVVLRITGPARSVMRGNKLLTTDITGCLVNGAARGDLSAEKVYVKLVRMTCAQPGGRFAVSEVKG
FISFAGRSGVRGRVVSREGSLVSQALLAGIVGGFGRGFSANANGIFAGQVGSDGQREALSPTDILAGGFGQGAGEAADTV
SRYLIERAEQYQPVVEMPTGIEVEIVFLDGVHVRSSSK
>Mature_437_residues
AEATQKDTEKRPLPGSPEARESGRRNLNSQIAQRQKMLLAGIGAIALIGGGMFIFGGDGDEGGSDANGAATIDTGGLVNR
NLSQREFVASYGNRLDAQGRAIKDLQQTQLPRPEIEQELEALRSENAQMRSDGQAAIDAISAENANLRSQLSEAAKAPAT
APPLPPPPAYGPGVGTRRAAQPPQGAPETQGGQLSLMSFGAETGKDGKPRAAETAPALLLEASRDYLPPNSYAPATVIVG
VDASTGVASQSDPLPVVLRITGPARSVMRGNKLLTTDITGCLVNGAARGDLSAEKVYVKLVRMTCAQPGGRFAVSEVKGF
ISFAGRSGVRGRVVSREGSLVSQALLAGIVGGFGRGFSANANGIFAGQVGSDGQREALSPTDILAGGFGQGAGEAADTVS
RYLIERAEQYQPVVEMPTGIEVEIVFLDGVHVRSSSK

Specific function: Involved in F pilus assembly [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the traB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 45346; Mature: 45215

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS00369 PTS_HPR_HIS ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEATQKDTEKRPLPGSPEARESGRRNLNSQIAQRQKMLLAGIGAIALIGGGMFIFGGDG
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
DEGGSDANGAATIDTGGLVNRNLSQREFVASYGNRLDAQGRAIKDLQQTQLPRPEIEQEL
CCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHH
EALRSENAQMRSDGQAAIDAISAENANLRSQLSEAAKAPATAPPLPPPPAYGPGVGTRRA
HHHHHCCCHHHCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
AQPPQGAPETQGGQLSLMSFGAETGKDGKPRAAETAPALLLEASRDYLPPNSYAPATVIV
CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEE
GVDASTGVASQSDPLPVVLRITGPARSVMRGNKLLTTDITGCLVNGAARGDLSAEKVYVK
ECCCCCCCCCCCCCCEEEEEECCCHHHHHCCCEEEEECHHHHHCCCCCCCCCHHHHHHHH
LVRMTCAQPGGRFAVSEVKGFISFAGRSGVRGRVVSREGSLVSQALLAGIVGGFGRGFSA
HHHHHHCCCCCCEEHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCC
NANGIFAGQVGSDGQREALSPTDILAGGFGQGAGEAADTVSRYLIERAEQYQPVVEMPTG
CCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCC
IEVEIVFLDGVHVRSSSK
CEEEEEEECCEEECCCCC
>Mature Secondary Structure 
AEATQKDTEKRPLPGSPEARESGRRNLNSQIAQRQKMLLAGIGAIALIGGGMFIFGGDG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
DEGGSDANGAATIDTGGLVNRNLSQREFVASYGNRLDAQGRAIKDLQQTQLPRPEIEQEL
CCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHH
EALRSENAQMRSDGQAAIDAISAENANLRSQLSEAAKAPATAPPLPPPPAYGPGVGTRRA
HHHHHCCCHHHCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
AQPPQGAPETQGGQLSLMSFGAETGKDGKPRAAETAPALLLEASRDYLPPNSYAPATVIV
CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEE
GVDASTGVASQSDPLPVVLRITGPARSVMRGNKLLTTDITGCLVNGAARGDLSAEKVYVK
ECCCCCCCCCCCCCCEEEEEECCCHHHHHCCCEEEEECHHHHHCCCCCCCCCHHHHHHHH
LVRMTCAQPGGRFAVSEVKGFISFAGRSGVRGRVVSREGSLVSQALLAGIVGGFGRGFSA
HHHHHHCCCCCCEEHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCC
NANGIFAGQVGSDGQREALSPTDILAGGFGQGAGEAADTVSRYLIERAEQYQPVVEMPTG
CCCEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCC
IEVEIVFLDGVHVRSSSK
CEEEEEEECCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7915817; 8655498 [H]