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The map label for this gene is traC [H]

Identifier: 85375792

GI number: 85375792

Start: 2991312

End: 2993855

Strand: Reverse

Name: traC [H]

Synonym: ELI_14825

Alternate gene names: 85375792

Gene position: 2993855-2991312 (Counterclockwise)

Preceding gene: 85375793

Following gene: 85375791

Centisome position: 98.08

GC content: 63.29

Gene sequence:

>2544_bases
GTGACCCTATCCCTGGCCACAGCGCGCGACGCTCTATCGCGCAGGCTCTTTGCCGATACGGCACGTGCCGAAAGCGAACG
CGCTCATTTCGGGCTCGATATGCTTTCAGACTGGCTCCCTTATCGGGTCTATGATGAAGGCGCGAAGCTCTACCGCAACG
CGCGCTCGAAAGGCTTCGTCCTCGAAGTGACCCCGCTGATCGGAGCTGACGAACAGACCGGCGAGATCCTCGGGCAGTTC
TTTTCCGAAGGGCTACCGCAAGGCGCCTGCCTCCAGATCCTGAACTTCGCATCGCCGCGCATCGGCAATGTCGTCGCTCC
CTGGTTCGCTCCGCGCTACGAGCAGGGCGGGATCTACGAAGCGATCGCGAGGGCGCGGACGAAGCGTCTCTATGATCTCG
TCTGGAATTCAGGTTCAGCGCATGCGCCTTTCCATGCCCGCAATGTCCGCGTGATCGTCTCGCTCGGCGTGCCGGTCCCC
GGCAGCGTGACCGACGCCGAGCTCTCTGAATGCCGCGAAGGCCTCATCGGCATGCTGCATTCGCTTGGGGCTCAGGCACA
GGAACTGCGCCCGAACGGGCTCCTCGCGCTGATCGATGAACTGACCGCGCCTACCACTGCGCACGAGCCGGACACGCACA
GCTGGAATCCGCACGACACCCTCGATACCCAAGCGATCCGGCGCGACATCGAACTCGAGGTCGAGTACGATCGCATGATC
CTCAGGACCGAGCGGTTCCGCGAGACGGGGCGCGATGAGCAGGGTCACCCGGAAGTCGGCGAATGCTACCCCGACCATTT
CGACGTGCGCCATTATGCCGTGCGCTCGACACCCGAACGCTGGGCACCATGGGAATGCGCAAGGCTTATCGGCGACATGT
TTGCCGACAAGCTGCGCTTCCCTTGTCCCACGGCCACCATGCTGTGCCTCGTCTATCCCGACCAGGAAGCCGCCTCGGCG
CGCGCGGGCTTCAAGTTCATGCGCACAACCAGCCTAAGCCAGACCAAGAGCGCGAGTTTCCTTCCCAAACTGGCCGAGCA
GTCGGCAGAATGGCGCCATGTCCAGGCCGAGCTCCAGGCGGGCAAGAAGCTCGTCAAACTGTTCTACGGGCTGACCAGCA
TTTCGCCGCTCGGCGAAGGCGATGCGCATGAGCGGGTAATCAAGGCCATCTACAAGGCAGCAGGCTGGGACCTGGCGGAC
GAGCGCTTCCTTCAGCTACAGGGGCTTGTCGCAGCGTTCCCCTTGAGCCTTGCCGACGGGCTGGCCCACGACATGGCGCG
CCTTAAGCGCCTCAAAACCATGCTCTCGACCACGGCGGCGCATATCGCGCCGATGCAGGGCGAGTATCTCGGCGGCGCTA
TCCCGCATCTCCTGCTTGTCGGCCGACGTGGCCAGCCCTTCTGGTGGTCTCCCTTCGAGAATGGCGCGGGCAATCATAAT
ATCGCGATCTGCGGCAAATCAGGGTCGGGCAAATCCGTGCTGTTGCAGGAGCTTTGCGCCGCCTTGCGCGGCGCGGGCGC
CAAGGTCGTGGTAATCGACGACGGGCGTAGCTTCGAGCATTCAGTCAAACTGCAGGGCGGTCGGTTCGTCGAGTTCACGC
TTGCTTCCGGCTTCTCGCTCAATCCCTTTTCGATGGTCGATGATGCCCGCGCCCATGAGGATGAAGACTACCGGCTCGAC
TGTTTCGCGATGATCAAGGCCATGATCGGCCAGATGGCGCGGCCAAGCTCCGCACCGAGCGATACCGAGCGCGGCTTGAT
CGACCAGGCCGTAACCGCAACCTGGGACGCGCTCGGCAGCGGCGCCTCGGTCGACGATGTTGCGCACGCGCTGCAAGGTT
CGGAGAGCGAAGCAGGCCGCGATCTTGCGACCGCCATCGCGCCCTTTTGCCGCGGCGGCAGCTATGGCGGGTTCTTTTCG
GGCAAGGCCAGCTTCGCGCTCGACGATGATTTCACCGTCTTCGAGATGAGCGATCTCGCAAGCCGCGAGGAGCTCCGAAG
CGTGGTCCTCTCGGCGATCATGTTCATGACCGGCCAGGCGATGACGCGCTCATCGCGCGCCACCAAGAAGCTGCTGCTGA
TCGATGAAGCCTGGGCGATGCTCAAGGGCGGCTCGATGGGCGAGTTCGTCGAGAGCTATGCGCGCACCGCGCGCAAATAT
GGCGGCGCGCTCGCAACCGCCACGCAGTCCTTGAACGACTATTACAAGTCCGACGGCGCGCGGGCCGCGCTCGAAAACAG
CGACTGGATGCTCGTGCTCCAGCAGAAGGCCGAGACCATAGCCGATTTTAGGGCGAACGCCCGGCTCGACATGGACGACC
GAACCGAGACGCTGATCCGCAGTCTCAAGCGTTCGGGCACAGAGTACAGCGAGATCTTTATCAAGGGTCCTGAGACCGAA
GCGGTCGGACGCCTCGTGCTCGATCCCTTCTCGGCAACGATCTATTCGTCCGATCCCGACACCTATGCCGCGATCCAGGA
TTATGAGCGGCGCGGGCACTCTCTCGCCGATGCGATCCGCATGGTCGCAGGAGACGGGCAGTGA

Upstream 100 bases:

>100_bases
CGATGCCCGGCGCCAACGCGCCGGAACCCGGGGGACCCGGCTCGTTTGTCCCTCCCCGCGAGCCGGTCCCCCATCCTGAC
AAATATGAAGGAGAAAGCCA

Downstream 100 bases:

>100_bases
TGGTCTCGCATCTGGCTGACCGGACGCCACCGGCAAACCTCAAAGCCATCCTGCCCTTTCTGCAGGGAACCTGCTTCGTC
CTGATCGAGACCGCGCGCTT

Product: putative inner-membrane protein traC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 847; Mature: 846

Protein sequence:

>847_residues
MTLSLATARDALSRRLFADTARAESERAHFGLDMLSDWLPYRVYDEGAKLYRNARSKGFVLEVTPLIGADEQTGEILGQF
FSEGLPQGACLQILNFASPRIGNVVAPWFAPRYEQGGIYEAIARARTKRLYDLVWNSGSAHAPFHARNVRVIVSLGVPVP
GSVTDAELSECREGLIGMLHSLGAQAQELRPNGLLALIDELTAPTTAHEPDTHSWNPHDTLDTQAIRRDIELEVEYDRMI
LRTERFRETGRDEQGHPEVGECYPDHFDVRHYAVRSTPERWAPWECARLIGDMFADKLRFPCPTATMLCLVYPDQEAASA
RAGFKFMRTTSLSQTKSASFLPKLAEQSAEWRHVQAELQAGKKLVKLFYGLTSISPLGEGDAHERVIKAIYKAAGWDLAD
ERFLQLQGLVAAFPLSLADGLAHDMARLKRLKTMLSTTAAHIAPMQGEYLGGAIPHLLLVGRRGQPFWWSPFENGAGNHN
IAICGKSGSGKSVLLQELCAALRGAGAKVVVIDDGRSFEHSVKLQGGRFVEFTLASGFSLNPFSMVDDARAHEDEDYRLD
CFAMIKAMIGQMARPSSAPSDTERGLIDQAVTATWDALGSGASVDDVAHALQGSESEAGRDLATAIAPFCRGGSYGGFFS
GKASFALDDDFTVFEMSDLASREELRSVVLSAIMFMTGQAMTRSSRATKKLLLIDEAWAMLKGGSMGEFVESYARTARKY
GGALATATQSLNDYYKSDGARAALENSDWMLVLQQKAETIADFRANARLDMDDRTETLIRSLKRSGTEYSEIFIKGPETE
AVGRLVLDPFSATIYSSDPDTYAAIQDYERRGHSLADAIRMVAGDGQ

Sequences:

>Translated_847_residues
MTLSLATARDALSRRLFADTARAESERAHFGLDMLSDWLPYRVYDEGAKLYRNARSKGFVLEVTPLIGADEQTGEILGQF
FSEGLPQGACLQILNFASPRIGNVVAPWFAPRYEQGGIYEAIARARTKRLYDLVWNSGSAHAPFHARNVRVIVSLGVPVP
GSVTDAELSECREGLIGMLHSLGAQAQELRPNGLLALIDELTAPTTAHEPDTHSWNPHDTLDTQAIRRDIELEVEYDRMI
LRTERFRETGRDEQGHPEVGECYPDHFDVRHYAVRSTPERWAPWECARLIGDMFADKLRFPCPTATMLCLVYPDQEAASA
RAGFKFMRTTSLSQTKSASFLPKLAEQSAEWRHVQAELQAGKKLVKLFYGLTSISPLGEGDAHERVIKAIYKAAGWDLAD
ERFLQLQGLVAAFPLSLADGLAHDMARLKRLKTMLSTTAAHIAPMQGEYLGGAIPHLLLVGRRGQPFWWSPFENGAGNHN
IAICGKSGSGKSVLLQELCAALRGAGAKVVVIDDGRSFEHSVKLQGGRFVEFTLASGFSLNPFSMVDDARAHEDEDYRLD
CFAMIKAMIGQMARPSSAPSDTERGLIDQAVTATWDALGSGASVDDVAHALQGSESEAGRDLATAIAPFCRGGSYGGFFS
GKASFALDDDFTVFEMSDLASREELRSVVLSAIMFMTGQAMTRSSRATKKLLLIDEAWAMLKGGSMGEFVESYARTARKY
GGALATATQSLNDYYKSDGARAALENSDWMLVLQQKAETIADFRANARLDMDDRTETLIRSLKRSGTEYSEIFIKGPETE
AVGRLVLDPFSATIYSSDPDTYAAIQDYERRGHSLADAIRMVAGDGQ
>Mature_846_residues
TLSLATARDALSRRLFADTARAESERAHFGLDMLSDWLPYRVYDEGAKLYRNARSKGFVLEVTPLIGADEQTGEILGQFF
SEGLPQGACLQILNFASPRIGNVVAPWFAPRYEQGGIYEAIARARTKRLYDLVWNSGSAHAPFHARNVRVIVSLGVPVPG
SVTDAELSECREGLIGMLHSLGAQAQELRPNGLLALIDELTAPTTAHEPDTHSWNPHDTLDTQAIRRDIELEVEYDRMIL
RTERFRETGRDEQGHPEVGECYPDHFDVRHYAVRSTPERWAPWECARLIGDMFADKLRFPCPTATMLCLVYPDQEAASAR
AGFKFMRTTSLSQTKSASFLPKLAEQSAEWRHVQAELQAGKKLVKLFYGLTSISPLGEGDAHERVIKAIYKAAGWDLADE
RFLQLQGLVAAFPLSLADGLAHDMARLKRLKTMLSTTAAHIAPMQGEYLGGAIPHLLLVGRRGQPFWWSPFENGAGNHNI
AICGKSGSGKSVLLQELCAALRGAGAKVVVIDDGRSFEHSVKLQGGRFVEFTLASGFSLNPFSMVDDARAHEDEDYRLDC
FAMIKAMIGQMARPSSAPSDTERGLIDQAVTATWDALGSGASVDDVAHALQGSESEAGRDLATAIAPFCRGGSYGGFFSG
KASFALDDDFTVFEMSDLASREELRSVVLSAIMFMTGQAMTRSSRATKKLLLIDEAWAMLKGGSMGEFVESYARTARKYG
GALATATQSLNDYYKSDGARAALENSDWMLVLQQKAETIADFRANARLDMDDRTETLIRSLKRSGTEYSEIFIKGPETEA
VGRLVLDPFSATIYSSDPDTYAAIQDYERRGHSLADAIRMVAGDGQ

Specific function: Required for the assembly of mature F-pilin subunits into extended F pili [H]

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002789
- InterPro:   IPR014117 [H]

Pfam domain/function: PF01935 DUF87 [H]

EC number: NA

Molecular weight: Translated: 92998; Mature: 92867

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSLATARDALSRRLFADTARAESERAHFGLDMLSDWLPYRVYDEGAKLYRNARSKGFV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEHHHHHHHHHCCCCCEE
LEVTPLIGADEQTGEILGQFFSEGLPQGACLQILNFASPRIGNVVAPWFAPRYEQGGIYE
EEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHH
AIARARTKRLYDLVWNSGSAHAPFHARNVRVIVSLGVPVPGSVTDAELSECREGLIGMLH
HHHHHHHHHHHHHHCCCCCCCCCEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH
SLGAQAQELRPNGLLALIDELTAPTTAHEPDTHSWNPHDTLDTQAIRRDIELEVEYDRMI
HHCCHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEHHHHH
LRTERFRETGRDEQGHPEVGECYPDHFDVRHYAVRSTPERWAPWECARLIGDMFADKLRF
HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
PCPTATMLCLVYPDQEAASARAGFKFMRTTSLSQTKSASFLPKLAEQSAEWRHVQAELQA
CCCCCEEEEEEECCHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
GKKLVKLFYGLTSISPLGEGDAHERVIKAIYKAAGWDLADERFLQLQGLVAAFPLSLADG
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LAHDMARLKRLKTMLSTTAAHIAPMQGEYLGGAIPHLLLVGRRGQPFWWSPFENGAGNHN
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEECCCCCCCCCCCCCCCCCCCE
IAICGKSGSGKSVLLQELCAALRGAGAKVVVIDDGRSFEHSVKLQGGRFVEFTLASGFSL
EEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCEEEEEEECCCCCC
NPFSMVDDARAHEDEDYRLDCFAMIKAMIGQMARPSSAPSDTERGLIDQAVTATWDALGS
CCHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC
GASVDDVAHALQGSESEAGRDLATAIAPFCRGGSYGGFFSGKASFALDDDFTVFEMSDLA
CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEEEHHHHH
SREELRSVVLSAIMFMTGQAMTRSSRATKKLLLIDEAWAMLKGGSMGEFVESYARTARKY
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHH
GGALATATQSLNDYYKSDGARAALENSDWMLVLQQKAETIADFRANARLDMDDRTETLIR
CCHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHH
SLKRSGTEYSEIFIKGPETEAVGRLVLDPFSATIYSSDPDTYAAIQDYERRGHSLADAIR
HHHHCCCCCCEEEEECCCHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCHHHHHHHH
MVAGDGQ
HHCCCCC
>Mature Secondary Structure 
TLSLATARDALSRRLFADTARAESERAHFGLDMLSDWLPYRVYDEGAKLYRNARSKGFV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEHHHHHHHHHCCCCCEE
LEVTPLIGADEQTGEILGQFFSEGLPQGACLQILNFASPRIGNVVAPWFAPRYEQGGIYE
EEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCHHH
AIARARTKRLYDLVWNSGSAHAPFHARNVRVIVSLGVPVPGSVTDAELSECREGLIGMLH
HHHHHHHHHHHHHHCCCCCCCCCEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH
SLGAQAQELRPNGLLALIDELTAPTTAHEPDTHSWNPHDTLDTQAIRRDIELEVEYDRMI
HHCCHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEHHHHH
LRTERFRETGRDEQGHPEVGECYPDHFDVRHYAVRSTPERWAPWECARLIGDMFADKLRF
HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
PCPTATMLCLVYPDQEAASARAGFKFMRTTSLSQTKSASFLPKLAEQSAEWRHVQAELQA
CCCCCEEEEEEECCHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
GKKLVKLFYGLTSISPLGEGDAHERVIKAIYKAAGWDLADERFLQLQGLVAAFPLSLADG
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LAHDMARLKRLKTMLSTTAAHIAPMQGEYLGGAIPHLLLVGRRGQPFWWSPFENGAGNHN
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEECCCCCCCCCCCCCCCCCCCE
IAICGKSGSGKSVLLQELCAALRGAGAKVVVIDDGRSFEHSVKLQGGRFVEFTLASGFSL
EEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCEEEEEEECCCCCC
NPFSMVDDARAHEDEDYRLDCFAMIKAMIGQMARPSSAPSDTERGLIDQAVTATWDALGS
CCHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC
GASVDDVAHALQGSESEAGRDLATAIAPFCRGGSYGGFFSGKASFALDDDFTVFEMSDLA
CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEEEHHHHH
SREELRSVVLSAIMFMTGQAMTRSSRATKKLLLIDEAWAMLKGGSMGEFVESYARTARKY
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHH
GGALATATQSLNDYYKSDGARAALENSDWMLVLQQKAETIADFRANARLDMDDRTETLIR
CCHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHH
SLKRSGTEYSEIFIKGPETEAVGRLVLDPFSATIYSSDPDTYAAIQDYERRGHSLADAIR
HHHHCCCCCCEEEEECCCHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCHHHHHHHH
MVAGDGQ
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2265751; 7915817; 1355084 [H]