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The map label for this gene is traU [H]

Identifier: 85375787

GI number: 85375787

Start: 2988396

End: 2989409

Strand: Reverse

Name: traU [H]

Synonym: ELI_14800

Alternate gene names: 85375787

Gene position: 2989409-2988396 (Counterclockwise)

Preceding gene: 85375788

Following gene: 85375786

Centisome position: 97.94

GC content: 60.16

Gene sequence:

>1014_bases
ATGAGCAGCATCCGCGCTTTCCTGATCCTCATGACGGCGACACTTTCGCTCGCTTTTGCCTCGCCAGCTTCGGCCGATGC
GGGTCCGGGCAAATGCACCGGCAGTTTCGTCAACCCGATCACCGACATCTGCTGGTCATGCCTTTTCCCGATCTCCATCG
GCGGGCTGGATATCTGGCCGAGCAATCGACCTGATCCCGACAATCCCGATCTCCCGGTCTGCCTTTGCGGGATCCGGCCC
GGCATCGCGATGGGGTTCTGGGAGCCGGTCCGCCTTGCCGATGTCAGCATGAAGCCGTGGTGCTTCGTGAACCTTGGCGG
CACAAAACTCGATCCCGGCTTCGATATCGGGTTCCGTTCGATCTCAGGACCGTCCGCCGTAGGCGGTGCCAGCCAGTATT
ATTCGAGCTGGCACGTCCACTGGTATGCCTATCCGCTGATCTACTGGATGGAGATCGTCGCCGATTTCCTGTGCCTCGAG
CCGGGATCAATCGATATCCTCTACATCTCCGAGATCGATCCGCTGTGGCAGGACAGCGAGCTCACTGCGATCATCAATCC
TGAAGCGGTGCTCTTTGCCAATCCGTTAGCGCTCGCCGCCTGCGCTGCTGATTGCGCGGCTTCGACCGCCAAGCTGCCAA
TCGACGAGATGTTCTGGTGCGCAGGCTGTCAGGGCTCGATGTATCCGATGAACGGCAATGTTTCGGCCTCGATCGGGCAT
GTCCAGGCCTCGCGGCTCGTGCTTTCTCGCTTCGCTTACAAGCTGCACCGTGAACTCGTCTCGTGGGGCACGATGGGGTC
TAAAGGCTTGTGCGGCAAATACCTGATGCCGGTGATGCGAAAGCAGCAATACCGCTTCCAGGCCACCAATCCCAATCCGG
CGACAAGCGGACGCTACGCCTGCCCGCCGATCGGCACCTCCACCACGCTTCAGGAACCCGGACAGATGATCCCCGCCATT
GGCGAAGACATGGGATACCTCGTCTGGCGCAAGAGGAATTGCTGCGCACTATGA

Upstream 100 bases:

>100_bases
CCGCGAAATTTGGCATCCGGTCCGTTCCAGCCCGCGTGCGGCAGGACGGGCGCCTGCTCGAGGTGAGCGAGATCGCGCTA
CCGCCCCGAAAGGCACGGCC

Downstream 100 bases:

>100_bases
ACAAATATCTGATCCTTTTGCCTGTTGGCCTCGCCGTGTCGCTGGGCGGGCTGGCCCTCGCCCAGAGCATACCCGAGGGT
ATCGACCTCAATGCAATCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MSSIRAFLILMTATLSLAFASPASADAGPGKCTGSFVNPITDICWSCLFPISIGGLDIWPSNRPDPDNPDLPVCLCGIRP
GIAMGFWEPVRLADVSMKPWCFVNLGGTKLDPGFDIGFRSISGPSAVGGASQYYSSWHVHWYAYPLIYWMEIVADFLCLE
PGSIDILYISEIDPLWQDSELTAIINPEAVLFANPLALAACAADCAASTAKLPIDEMFWCAGCQGSMYPMNGNVSASIGH
VQASRLVLSRFAYKLHRELVSWGTMGSKGLCGKYLMPVMRKQQYRFQATNPNPATSGRYACPPIGTSTTLQEPGQMIPAI
GEDMGYLVWRKRNCCAL

Sequences:

>Translated_337_residues
MSSIRAFLILMTATLSLAFASPASADAGPGKCTGSFVNPITDICWSCLFPISIGGLDIWPSNRPDPDNPDLPVCLCGIRP
GIAMGFWEPVRLADVSMKPWCFVNLGGTKLDPGFDIGFRSISGPSAVGGASQYYSSWHVHWYAYPLIYWMEIVADFLCLE
PGSIDILYISEIDPLWQDSELTAIINPEAVLFANPLALAACAADCAASTAKLPIDEMFWCAGCQGSMYPMNGNVSASIGH
VQASRLVLSRFAYKLHRELVSWGTMGSKGLCGKYLMPVMRKQQYRFQATNPNPATSGRYACPPIGTSTTLQEPGQMIPAI
GEDMGYLVWRKRNCCAL
>Mature_336_residues
SSIRAFLILMTATLSLAFASPASADAGPGKCTGSFVNPITDICWSCLFPISIGGLDIWPSNRPDPDNPDLPVCLCGIRPG
IAMGFWEPVRLADVSMKPWCFVNLGGTKLDPGFDIGFRSISGPSAVGGASQYYSSWHVHWYAYPLIYWMEIVADFLCLEP
GSIDILYISEIDPLWQDSELTAIINPEAVLFANPLALAACAADCAASTAKLPIDEMFWCAGCQGSMYPMNGNVSASIGHV
QASRLVLSRFAYKLHRELVSWGTMGSKGLCGKYLMPVMRKQQYRFQATNPNPATSGRYACPPIGTSTTLQEPGQMIPAIG
EDMGYLVWRKRNCCAL

Specific function: Appears to be more essential to conjugal DNA transfer than to assembly of pilus filaments. Required for F plasmid conjugative transfer [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009649 [H]

Pfam domain/function: PF06834 TraU [H]

EC number: NA

Molecular weight: Translated: 36621; Mature: 36489

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSIRAFLILMTATLSLAFASPASADAGPGKCTGSFVNPITDICWSCLFPISIGGLDIWP
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECC
SNRPDPDNPDLPVCLCGIRPGIAMGFWEPVRLADVSMKPWCFVNLGGTKLDPGFDIGFRS
CCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCC
ISGPSAVGGASQYYSSWHVHWYAYPLIYWMEIVADFLCLEPGSIDILYISEIDPLWQDSE
CCCCCCCCCHHHHHCCEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC
LTAIINPEAVLFANPLALAACAADCAASTAKLPIDEMFWCAGCQGSMYPMNGNVSASIGH
EEEEECCCEEEEECHHHHHHHHHHHHCCCCCCCHHHHHEECCCCCCEEECCCCCEEEECH
VQASRLVLSRFAYKLHRELVSWGTMGSKGLCGKYLMPVMRKQQYRFQATNPNPATSGRYA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCEEEECCCCCCCCCCEE
CPPIGTSTTLQEPGQMIPAIGEDMGYLVWRKRNCCAL
CCCCCCCCCCCCCCCCCCHHCCCCCEEEEECCCCCCC
>Mature Secondary Structure 
SSIRAFLILMTATLSLAFASPASADAGPGKCTGSFVNPITDICWSCLFPISIGGLDIWP
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECC
SNRPDPDNPDLPVCLCGIRPGIAMGFWEPVRLADVSMKPWCFVNLGGTKLDPGFDIGFRS
CCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCC
ISGPSAVGGASQYYSSWHVHWYAYPLIYWMEIVADFLCLEPGSIDILYISEIDPLWQDSE
CCCCCCCCCHHHHHCCEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC
LTAIINPEAVLFANPLALAACAADCAASTAKLPIDEMFWCAGCQGSMYPMNGNVSASIGH
EEEEECCCEEEEECHHHHHHHHHHHHCCCCCCCHHHHHEECCCCCCEEECCCCCEEEECH
VQASRLVLSRFAYKLHRELVSWGTMGSKGLCGKYLMPVMRKQQYRFQATNPNPATSGRYA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCEEEECCCCCCCCCCEE
CPPIGTSTTLQEPGQMIPAIGEDMGYLVWRKRNCCAL
CCCCCCCCCCCCCCCCCCHHCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2198250; 7915817; 2050638; 1355084 [H]