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The map label for this gene is yjbJ [H]

Identifier: 85375750

GI number: 85375750

Start: 2941283

End: 2941873

Strand: Reverse

Name: yjbJ [H]

Synonym: ELI_14615

Alternate gene names: 85375750

Gene position: 2941873-2941283 (Counterclockwise)

Preceding gene: 85375754

Following gene: 85375749

Centisome position: 96.38

GC content: 57.7

Gene sequence:

>591_bases
ATGACTATCCCTAATCGACTGACGAGATTTCTGATCGCTCTTGCAGGCGTGATCGCAACCTCATTTCCTCCCGTCAGAGC
CCAGGAGTTCGTCCTCTTCGAACACGCGGTCCACCAACCGAAGGCTGAGAGCGAATCTAAGGCGGCTAGACAGTACGCTC
CGGCGGTTCGTTCTCGAGGCAAGACCAATATTTCCTACAGAGAAGGGCTGTACATGGAGGCTATTGCGAAGGCTGAGCTG
CGTTACGGTTTGCCTAAGAACTTGCTTCGCGCTTTGATCTGGGCCGAGTCTCGTTTCAATCCCATGGCGGTTAGTCCGGC
CGGCGCTGCCGGACTAGCGCAACTCATGCCAGCTACCGCGCGCGAACTGGGGGTGCGAAACCGGCATGATCCTATCGCCT
CGATCGACGGCGGCGCGCGCTATTTGCGCGATATGCTGAACCGCTTTGAAGCGATTCACCTAGCCTTGGCTGCCTATAAC
GCGGGTCCTGGGGCCGTATCGCGTGCCGGCGGGATTCCCAGAAATGGTGAGACACCGCAATATGTCCGGTCGGTGCTATC
CAGATGGTCTACGATCGGGGCATACCATTGA

Upstream 100 bases:

>100_bases
CCTCCTCTCCTCTCCCCAAGGCTGGCAATTGCCGCTTTCCTACAGAGGTATGTTCTTTTTATGTTCTTCTATGATTCGAA
GCAACAGGACATCAGGCGAC

Downstream 100 bases:

>100_bases
CGAATTCTTGTAATTTCAGATTATTATCTGCTGGTGCTTATCGTATTGAAAACAGACTATGCCGATGCGTGAAGAACCGA
GTGACCCGCTCGACTTTCGT

Product: lytic murein transglycosylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MTIPNRLTRFLIALAGVIATSFPPVRAQEFVLFEHAVHQPKAESESKAARQYAPAVRSRGKTNISYREGLYMEAIAKAEL
RYGLPKNLLRALIWAESRFNPMAVSPAGAAGLAQLMPATARELGVRNRHDPIASIDGGARYLRDMLNRFEAIHLALAAYN
AGPGAVSRAGGIPRNGETPQYVRSVLSRWSTIGAYH

Sequences:

>Translated_196_residues
MTIPNRLTRFLIALAGVIATSFPPVRAQEFVLFEHAVHQPKAESESKAARQYAPAVRSRGKTNISYREGLYMEAIAKAEL
RYGLPKNLLRALIWAESRFNPMAVSPAGAAGLAQLMPATARELGVRNRHDPIASIDGGARYLRDMLNRFEAIHLALAAYN
AGPGAVSRAGGIPRNGETPQYVRSVLSRWSTIGAYH
>Mature_195_residues
TIPNRLTRFLIALAGVIATSFPPVRAQEFVLFEHAVHQPKAESESKAARQYAPAVRSRGKTNISYREGLYMEAIAKAELR
YGLPKNLLRALIWAESRFNPMAVSPAGAAGLAQLMPATARELGVRNRHDPIASIDGGARYLRDMLNRFEAIHLALAAYNA
GPGAVSRAGGIPRNGETPQYVRSVLSRWSTIGAYH

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase slt family [H]

Homologues:

Organism=Escherichia coli, GI171474010, Length=82, Percent_Identity=42.6829268292683, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: NA

Molecular weight: Translated: 21423; Mature: 21292

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIPNRLTRFLIALAGVIATSFPPVRAQEFVLFEHAVHQPKAESESKAARQYAPAVRSRG
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
KTNISYREGLYMEAIAKAELRYGLPKNLLRALIWAESRFNPMAVSPAGAAGLAQLMPATA
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHH
RELGVRNRHDPIASIDGGARYLRDMLNRFEAIHLALAAYNAGPGAVSRAGGIPRNGETPQ
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHH
YVRSVLSRWSTIGAYH
HHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TIPNRLTRFLIALAGVIATSFPPVRAQEFVLFEHAVHQPKAESESKAARQYAPAVRSRG
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
KTNISYREGLYMEAIAKAELRYGLPKNLLRALIWAESRFNPMAVSPAGAAGLAQLMPATA
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHH
RELGVRNRHDPIASIDGGARYLRDMLNRFEAIHLALAAYNAGPGAVSRAGGIPRNGETPQ
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHH
YVRSVLSRWSTIGAYH
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]