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The map label for this gene is yfdE [H]

Identifier: 85375686

GI number: 85375686

Start: 2871749

End: 2872894

Strand: Reverse

Name: yfdE [H]

Synonym: ELI_14295

Alternate gene names: 85375686

Gene position: 2872894-2871749 (Counterclockwise)

Preceding gene: 85375687

Following gene: 85375678

Centisome position: 94.12

GC content: 65.18

Gene sequence:

>1146_bases
ATGTGGCTGACCGAACCGCGCAATGCCCATTCTCCGCTCGCCGGGCTCAAGGTGCTCGAGCTGGCGCGCGTTTTGGCGGG
GCCGTTCTGCGGACAGATCCTCGCCGATCTCGGCGCCGACGTCATCAAGGTCGAAAGCCCCGAAGGCGACGGGACGCGGC
AATGGGGGCCGCCATGGGTCGAGCGCGAGGACGGTTCGCGCGAAGCCGCCTATTATCACGCCTGCAATCGCGGCAAGCGG
TCGATCATCGCCGATTTTCGCGACGCGGCGGACCTGGCGCAGGTAAGGGATCTGGCGGCGAGTGCCGATGTCGTGATCGA
GAACTTCAAGACCGGGTCGCTGGCGAAGTTCGGCCTCGATTATCCTGGCCTCTCCGCGTCGAACGAACGGCTGGTCTATT
GCTCGATCACCGGCTTCGGCCAGACCGGGCCGCGCGCGCATGAGGCGGGCTACGATTTCGTGGTCCAGGGCATGAGCGGC
TTCATGTCGCTGACCGGCGAGCCCGAGGGTGTGCCGGTCAAGATGGGGATTTCCATCTCGGACCTGTCGACCGGAGTATG
GTCGGCCAATGCCATCCAGGCCGCGCTGCTGATGCGCGAGAGGACCGGGCGTGGCCAGCATATCGACATGGCGCTGATGG
ACTGTTCGGTCGGATTGCTGGCCAACCAGGCGACCTATCATTTCGCGAGTGGCGAAAACCCGCCGCGGATGGGCAATGCG
CATGCGCAGGTCGCACCCTACGGCGTGTTCCCGACCAGCGACGGACATGTGATCCTCGCGCCCGCCAATGACGGCCTGTT
CCGCAAGCTGATGCGGATGCTGGGGCGTAGCGACCTAACGGAAGATGCACGCTTTGCGACCAATGGCGGCCGGACCGAAC
ACGCGACGGATCTCGATGCCGCAATTGCTGCGGAGAGCGCTACATGGACCAAGGCCGACCTGCTACAGGCCTGTCACGAC
CACGGCATCCCCGCCGGGCCCATCAACAGGCTCGACGAAGTGTTTTCCGATCCGCAGGTGGTCGAGCGCGGGCTGAAGGT
CGATCTCGGCGGATTGGCCTCCGTGCGCAGCCCGTTCACCTTCTCCGAAGCCGAGTTGGCGCTCGATCGTCCCTCGCCGA
TGCTGGGCGAAGACCAGCCGGACTAA

Upstream 100 bases:

>100_bases
CAGCCCCTTCCGCCTGATCGAACTGGCGGAAGGCGTGACGGCAGACGAAGTTGCCGCCAGCACGACCGCGAAATACGAGG
TCGCGCTCGGCTGATCCGCC

Downstream 100 bases:

>100_bases
CTACCGACGCGCGCGATCGACGACGCTGCCCGCCGCCACAATCGCTCCAGCGGTCCCTGCCCGAGATATTTCGACCATAA
CGGGGACCAGACCAGCATCG

Product: putative membrane-anchored protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MWLTEPRNAHSPLAGLKVLELARVLAGPFCGQILADLGADVIKVESPEGDGTRQWGPPWVEREDGSREAAYYHACNRGKR
SIIADFRDAADLAQVRDLAASADVVIENFKTGSLAKFGLDYPGLSASNERLVYCSITGFGQTGPRAHEAGYDFVVQGMSG
FMSLTGEPEGVPVKMGISISDLSTGVWSANAIQAALLMRERTGRGQHIDMALMDCSVGLLANQATYHFASGENPPRMGNA
HAQVAPYGVFPTSDGHVILAPANDGLFRKLMRMLGRSDLTEDARFATNGGRTEHATDLDAAIAAESATWTKADLLQACHD
HGIPAGPINRLDEVFSDPQVVERGLKVDLGGLASVRSPFTFSEAELALDRPSPMLGEDQPD

Sequences:

>Translated_381_residues
MWLTEPRNAHSPLAGLKVLELARVLAGPFCGQILADLGADVIKVESPEGDGTRQWGPPWVEREDGSREAAYYHACNRGKR
SIIADFRDAADLAQVRDLAASADVVIENFKTGSLAKFGLDYPGLSASNERLVYCSITGFGQTGPRAHEAGYDFVVQGMSG
FMSLTGEPEGVPVKMGISISDLSTGVWSANAIQAALLMRERTGRGQHIDMALMDCSVGLLANQATYHFASGENPPRMGNA
HAQVAPYGVFPTSDGHVILAPANDGLFRKLMRMLGRSDLTEDARFATNGGRTEHATDLDAAIAAESATWTKADLLQACHD
HGIPAGPINRLDEVFSDPQVVERGLKVDLGGLASVRSPFTFSEAELALDRPSPMLGEDQPD
>Mature_381_residues
MWLTEPRNAHSPLAGLKVLELARVLAGPFCGQILADLGADVIKVESPEGDGTRQWGPPWVEREDGSREAAYYHACNRGKR
SIIADFRDAADLAQVRDLAASADVVIENFKTGSLAKFGLDYPGLSASNERLVYCSITGFGQTGPRAHEAGYDFVVQGMSG
FMSLTGEPEGVPVKMGISISDLSTGVWSANAIQAALLMRERTGRGQHIDMALMDCSVGLLANQATYHFASGENPPRMGNA
HAQVAPYGVFPTSDGHVILAPANDGLFRKLMRMLGRSDLTEDARFATNGGRTEHATDLDAAIAAESATWTKADLLQACHD
HGIPAGPINRLDEVFSDPQVVERGLKVDLGGLASVRSPFTFSEAELALDRPSPMLGEDQPD

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=391, Percent_Identity=36.8286445012788, Blast_Score=270, Evalue=2e-72,
Organism=Homo sapiens, GI300863124, Length=363, Percent_Identity=36.9146005509642, Blast_Score=256, Evalue=2e-68,
Organism=Homo sapiens, GI13376042, Length=363, Percent_Identity=33.6088154269972, Blast_Score=218, Evalue=1e-56,
Organism=Homo sapiens, GI300863126, Length=391, Percent_Identity=32.7365728900256, Blast_Score=211, Evalue=9e-55,
Organism=Homo sapiens, GI266456254, Length=366, Percent_Identity=29.2349726775956, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI42794625, Length=366, Percent_Identity=29.2349726775956, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI266458393, Length=261, Percent_Identity=31.8007662835249, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI266458397, Length=261, Percent_Identity=31.8007662835249, Blast_Score=108, Evalue=9e-24,
Organism=Homo sapiens, GI42822893, Length=148, Percent_Identity=35.1351351351351, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI266458395, Length=148, Percent_Identity=35.1351351351351, Blast_Score=86, Evalue=5e-17,
Organism=Escherichia coli, GI87082093, Length=352, Percent_Identity=36.3636363636364, Blast_Score=237, Evalue=1e-63,
Organism=Escherichia coli, GI1788717, Length=395, Percent_Identity=28.1012658227848, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1786222, Length=351, Percent_Identity=25.9259259259259, Blast_Score=83, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI115535051, Length=274, Percent_Identity=32.1167883211679, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI32564160, Length=371, Percent_Identity=27.4932614555256, Blast_Score=98, Evalue=6e-21,
Organism=Drosophila melanogaster, GI24648431, Length=372, Percent_Identity=38.7096774193548, Blast_Score=261, Evalue=8e-70,
Organism=Drosophila melanogaster, GI24585488, Length=338, Percent_Identity=27.2189349112426, Blast_Score=106, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 40776; Mature: 40776

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLTEPRNAHSPLAGLKVLELARVLAGPFCGQILADLGADVIKVESPEGDGTRQWGPPWV
CCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC
EREDGSREAAYYHACNRGKRSIIADFRDAADLAQVRDLAASADVVIENFKTGSLAKFGLD
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEECCC
YPGLSASNERLVYCSITGFGQTGPRAHEAGYDFVVQGMSGFMSLTGEPEGVPVKMGISIS
CCCCCCCCCEEEEEEEECCCCCCCCHHHCCCHHHHHHHHHHEECCCCCCCCEEEECCCHH
DLSTGVWSANAIQAALLMRERTGRGQHIDMALMDCSVGLLANQATYHFASGENPPRMGNA
HCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHCCHHHHCCCCEEEECCCCCCCCCCCC
HAQVAPYGVFPTSDGHVILAPANDGLFRKLMRMLGRSDLTEDARFATNGGRTEHATDLDA
CCEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH
AIAAESATWTKADLLQACHDHGIPAGPINRLDEVFSDPQVVERGLKVDLGGLASVRSPFT
HHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHCCCEECCCCHHHHCCCCC
FSEAELALDRPSPMLGEDQPD
CCHHHHEECCCCCCCCCCCCC
>Mature Secondary Structure
MWLTEPRNAHSPLAGLKVLELARVLAGPFCGQILADLGADVIKVESPEGDGTRQWGPPWV
CCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCC
EREDGSREAAYYHACNRGKRSIIADFRDAADLAQVRDLAASADVVIENFKTGSLAKFGLD
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEECCC
YPGLSASNERLVYCSITGFGQTGPRAHEAGYDFVVQGMSGFMSLTGEPEGVPVKMGISIS
CCCCCCCCCEEEEEEEECCCCCCCCHHHCCCHHHHHHHHHHEECCCCCCCCEEEECCCHH
DLSTGVWSANAIQAALLMRERTGRGQHIDMALMDCSVGLLANQATYHFASGENPPRMGNA
HCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHCCHHHHCCCCEEEECCCCCCCCCCCC
HAQVAPYGVFPTSDGHVILAPANDGLFRKLMRMLGRSDLTEDARFATNGGRTEHATDLDA
CCEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH
AIAAESATWTKADLLQACHDHGIPAGPINRLDEVFSDPQVVERGLKVDLGGLASVRSPFT
HHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHCCCEECCCCHHHHCCCCC
FSEAELALDRPSPMLGEDQPD
CCHHHHEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]