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The map label for this gene is exbB [H]

Identifier: 85375577

GI number: 85375577

Start: 2771636

End: 2772427

Strand: Reverse

Name: exbB [H]

Synonym: ELI_13750

Alternate gene names: 85375577

Gene position: 2772427-2771636 (Counterclockwise)

Preceding gene: 85375578

Following gene: 85375576

Centisome position: 90.83

GC content: 62.88

Gene sequence:

>792_bases
ATGATTATCGAACTTCTTACCGCAGGGGCCGGAGAAGCTGCTCCCGCTACGCAGTTTGGCTTCTGGGAAGCCATGGAACA
GGGCGGCGCGATCGCCTGGTTCATCTTCGGCGTGCTTGTGATCATGTCGATCGGCTCGTTCTACATCCTGATCACCAAGC
TGCTCGAGCAGAACAAGATCATGAAGCAGTACAAGGGCGTGCGCACCAGCTTCTGGAAGGCTCCGACCCTCAAGGACGGC
GCGACCAAACTGGACAAGAACAGCGCATGGCGCCAGATCGTCGACGACGCCATGAAGGCCGACGAAGATCACGGCAAGAT
GGCCGACCAGCGCGAAGCGCACGATTACCTGCACGGTTCGCTGCAGGCGTCGGAAGACTCGATCAATGCGAAGCTGGCCG
GTGGCCTGCCGTTCCTCGCATCGGTCGGTGCAACCGCGCCGTTTATCGGCCTGCTCGGTACCGTGATCGGTATCTACCGC
GCCCTGATCAACATCGGTCTTGCCGGCTCGGCATCGATCGACAAGGTCGCCGGCCCGGTGGGTGAGGCGCTGATCATGAC
CGCCATTGGCCTGCTCGTCGCGGTCCCGGCGGTGCTCGCCTACAACTGGCTGCAAAGCCGCAATCGCCGCATTGCCGAAC
TGCTGACCGGTTTTTCGACCGACGTTCTCGCCTACATCGGCTCGAACGGCCAGGTGAAGCCGGTCGTGGCAACCGCTGCG
CCCGCCAAGACCGCGCCGAAGCCGGCTGCCAAGCCGGCGACGACCGCCGGTGGCGCACCGGTCAAGAAGTAA

Upstream 100 bases:

>100_bases
GGTAGCGGCAACGAAGTGGCTGGCACCTACACGCAATCGGTCCGCTGGCAGCTGCCCGAATAAACCCTTTGAACTCATCC
TTTTCTGAGAGGACTCGCAA

Downstream 100 bases:

>100_bases
GCGATAGAACCGGGCGGACGGCCCCATGGTCGTCCGCCCGTTCATCGACGAGACACGACCACTGACGGATAGGATGTAGT
CATGGCAATTTCTACGGGAG

Product: biopolymer transport ExbB protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MIIELLTAGAGEAAPATQFGFWEAMEQGGAIAWFIFGVLVIMSIGSFYILITKLLEQNKIMKQYKGVRTSFWKAPTLKDG
ATKLDKNSAWRQIVDDAMKADEDHGKMADQREAHDYLHGSLQASEDSINAKLAGGLPFLASVGATAPFIGLLGTVIGIYR
ALINIGLAGSASIDKVAGPVGEALIMTAIGLLVAVPAVLAYNWLQSRNRRIAELLTGFSTDVLAYIGSNGQVKPVVATAA
PAKTAPKPAAKPATTAGGAPVKK

Sequences:

>Translated_263_residues
MIIELLTAGAGEAAPATQFGFWEAMEQGGAIAWFIFGVLVIMSIGSFYILITKLLEQNKIMKQYKGVRTSFWKAPTLKDG
ATKLDKNSAWRQIVDDAMKADEDHGKMADQREAHDYLHGSLQASEDSINAKLAGGLPFLASVGATAPFIGLLGTVIGIYR
ALINIGLAGSASIDKVAGPVGEALIMTAIGLLVAVPAVLAYNWLQSRNRRIAELLTGFSTDVLAYIGSNGQVKPVVATAA
PAKTAPKPAAKPATTAGGAPVKK
>Mature_263_residues
MIIELLTAGAGEAAPATQFGFWEAMEQGGAIAWFIFGVLVIMSIGSFYILITKLLEQNKIMKQYKGVRTSFWKAPTLKDG
ATKLDKNSAWRQIVDDAMKADEDHGKMADQREAHDYLHGSLQASEDSINAKLAGGLPFLASVGATAPFIGLLGTVIGIYR
ALINIGLAGSASIDKVAGPVGEALIMTAIGLLVAVPAVLAYNWLQSRNRRIAELLTGFSTDVLAYIGSNGQVKPVVATAA
PAKTAPKPAAKPATTAGGAPVKK

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates. Protects exbD from proteolytic degradation and functionally stabilizes tonB [H]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

Organism=Escherichia coli, GI1786958, Length=181, Percent_Identity=33.1491712707182, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1789381, Length=189, Percent_Identity=25.3968253968254, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 27623; Mature: 27623

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIELLTAGAGEAAPATQFGFWEAMEQGGAIAWFIFGVLVIMSIGSFYILITKLLEQNKI
CEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MKQYKGVRTSFWKAPTLKDGATKLDKNSAWRQIVDDAMKADEDHGKMADQREAHDYLHGS
HHHHCCHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
LQASEDSINAKLAGGLPFLASVGATAPFIGLLGTVIGIYRALINIGLAGSASIDKVAGPV
CCCCCCCCCEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
GEALIMTAIGLLVAVPAVLAYNWLQSRNRRIAELLTGFSTDVLAYIGSNGQVKPVVATAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEECC
PAKTAPKPAAKPATTAGGAPVKK
CCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIIELLTAGAGEAAPATQFGFWEAMEQGGAIAWFIFGVLVIMSIGSFYILITKLLEQNKI
CEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MKQYKGVRTSFWKAPTLKDGATKLDKNSAWRQIVDDAMKADEDHGKMADQREAHDYLHGS
HHHHCCHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
LQASEDSINAKLAGGLPFLASVGATAPFIGLLGTVIGIYRALINIGLAGSASIDKVAGPV
CCCCCCCCCEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
GEALIMTAIGLLVAVPAVLAYNWLQSRNRRIAELLTGFSTDVLAYIGSNGQVKPVVATAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEECC
PAKTAPKPAAKPATTAGGAPVKK
CCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371459 [H]