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The map label for this gene is cbpA [C]

Identifier: 85375510

GI number: 85375510

Start: 2703781

End: 2704740

Strand: Reverse

Name: cbpA [C]

Synonym: ELI_13415

Alternate gene names: 85375510

Gene position: 2704740-2703781 (Counterclockwise)

Preceding gene: 85375512

Following gene: 85375509

Centisome position: 88.61

GC content: 65.21

Gene sequence:

>960_bases
ATGGCAGATCCTTACGCAACCCTTGGCGTTTCGCGCACGGCCTCCGAGAAGGAGATCAAGAGCGCCTATCGCAAGCTCGC
GAAAGAGCTGCACCCCGATCGCAACAAGGACAATCCGAAAGCCGCGGAGCGATTTTCCGACGTAACGAATGCCTATGACC
TGCTCTCGGACAAGGACCAGCGCGCGCGCTTCGATCGCGGCGAAATCGATGCCGAGGGCAATCCGGCCAATCCCTTCGCC
GGAATGGGCGGCGGCTTCGGCGGCGGCAACAGCGGCTTCGGTGGCGGCCGCGGCCGACAATATACGGCAGAAGATTTCCA
GGGCTTCGGCAATGACGATGTCGACCTCGGCGATATCTTCGAAGGCCTGTTCGGCGGCGGCGGTGCGCGCCAGCGCGGCG
GCTCGCCGTTCGGGCGGCGCGGCCCCACCCCTCCCCCGCGCAAGGGCGCAGACATCGCCTATCGGCTCAGGGTGCCATTC
GTCGATGCCGCAGCGCGGCGCGACCAGCGCATCACGCTGTCGGACGGCAAGACGATCGACCTGAAACTTCCGGCGGGGGT
CGAGGACGGGACCCAGATGCGGCTCAAGGGCAAAGGCGAACAAGGGCCCGGAGGTGCTGGCGACGGTATCGTTACCATCG
CGGTCGAAAAGCACCCGTTCTTCGAACGCGAGGGCGACAATGTCCGGCTCGACCTGCCGATCACGCTGAGTGAAGCGGTG
CATGGTGCCAAGGTCAAAGTGCCGACGGTAGACGGCGCTGTCATGCTGACGATCAAGCCGGGCATGTCGGGCGGCACCGT
CATGCGGCTCTCGGGCAAAGGCTTCACCGGCAAGAGCGGCAAGCGCGGCGACCAGCTGGTCAAGCTGCAGATCGCGCTGC
CGGAGGACATGAGCGATCTCGAGACACGGCTGGAGGGTTGGCAGGACGAAGGAAATCCGCGAGACAAGCTCGGCGTCTGA

Upstream 100 bases:

>100_bases
CAGCAGGAATTTCTCAATGCTGCGACACCCTTAGCCGCGCGACCGACAGCGTAAAGCGACGCTTGCACCTATCCACTGTT
ACACCTAGCTAACACACGAC

Downstream 100 bases:

>100_bases
TGCACGGCAATTTGGGGTAGGACTTGAGCGACGACGATCTGCCGACTCCGGAAGCGCGCAAGATTCGCTCGCTATCGCCG
GAGGAACGCCGCCGCGATGC

Product: DnaJ-class molecular chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MADPYATLGVSRTASEKEIKSAYRKLAKELHPDRNKDNPKAAERFSDVTNAYDLLSDKDQRARFDRGEIDAEGNPANPFA
GMGGGFGGGNSGFGGGRGRQYTAEDFQGFGNDDVDLGDIFEGLFGGGGARQRGGSPFGRRGPTPPPRKGADIAYRLRVPF
VDAAARRDQRITLSDGKTIDLKLPAGVEDGTQMRLKGKGEQGPGGAGDGIVTIAVEKHPFFEREGDNVRLDLPITLSEAV
HGAKVKVPTVDGAVMLTIKPGMSGGTVMRLSGKGFTGKSGKRGDQLVKLQIALPEDMSDLETRLEGWQDEGNPRDKLGV

Sequences:

>Translated_319_residues
MADPYATLGVSRTASEKEIKSAYRKLAKELHPDRNKDNPKAAERFSDVTNAYDLLSDKDQRARFDRGEIDAEGNPANPFA
GMGGGFGGGNSGFGGGRGRQYTAEDFQGFGNDDVDLGDIFEGLFGGGGARQRGGSPFGRRGPTPPPRKGADIAYRLRVPF
VDAAARRDQRITLSDGKTIDLKLPAGVEDGTQMRLKGKGEQGPGGAGDGIVTIAVEKHPFFEREGDNVRLDLPITLSEAV
HGAKVKVPTVDGAVMLTIKPGMSGGTVMRLSGKGFTGKSGKRGDQLVKLQIALPEDMSDLETRLEGWQDEGNPRDKLGV
>Mature_318_residues
ADPYATLGVSRTASEKEIKSAYRKLAKELHPDRNKDNPKAAERFSDVTNAYDLLSDKDQRARFDRGEIDAEGNPANPFAG
MGGGFGGGNSGFGGGRGRQYTAEDFQGFGNDDVDLGDIFEGLFGGGGARQRGGSPFGRRGPTPPPRKGADIAYRLRVPFV
DAAARRDQRITLSDGKTIDLKLPAGVEDGTQMRLKGKGEQGPGGAGDGIVTIAVEKHPFFEREGDNVRLDLPITLSEAVH
GAKVKVPTVDGAVMLTIKPGMSGGTVMRLSGKGFTGKSGKRGDQLVKLQIALPEDMSDLETRLEGWQDEGNPRDKLGV

Specific function: DNA-Binding Protein That Preferentially Recognizes A Curved DNA Sequence. It Is Probably A Functional Analog Of Dnaj; Displays Overlapping Activities With Dnaj, But Functions Under Different Conditions, Probably Acting As A Molecular Chaperone In An Adapt

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI201862587, Length=338, Percent_Identity=31.0650887573964, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI201862518, Length=338, Percent_Identity=31.0650887573964, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI56549115, Length=338, Percent_Identity=31.0650887573964, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI6631085, Length=341, Percent_Identity=29.6187683284457, Blast_Score=115, Evalue=6e-26,
Organism=Homo sapiens, GI5453690, Length=337, Percent_Identity=30.5637982195846, Blast_Score=111, Evalue=7e-25,
Organism=Homo sapiens, GI7706495, Length=264, Percent_Identity=31.8181818181818, Blast_Score=105, Evalue=8e-23,
Organism=Homo sapiens, GI4504511, Length=327, Percent_Identity=25.6880733944954, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI39204547, Length=326, Percent_Identity=27.3006134969325, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI194328758, Length=284, Percent_Identity=26.4084507042254, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI194328760, Length=285, Percent_Identity=26.3157894736842, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI205360840, Length=63, Percent_Identity=57.1428571428571, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI205360838, Length=63, Percent_Identity=57.1428571428571, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI68077168, Length=125, Percent_Identity=37.6, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI68077166, Length=125, Percent_Identity=37.6, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI56687498, Length=64, Percent_Identity=53.125, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI24308127, Length=73, Percent_Identity=47.945205479452, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI23503241, Length=72, Percent_Identity=48.6111111111111, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI47777312, Length=75, Percent_Identity=52, Blast_Score=69, Evalue=7e-12,
Organism=Homo sapiens, GI4885495, Length=67, Percent_Identity=50.7462686567164, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI8922563, Length=64, Percent_Identity=46.875, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI17388799, Length=67, Percent_Identity=50.7462686567164, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI45504382, Length=62, Percent_Identity=43.5483870967742, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI29126218, Length=62, Percent_Identity=45.1612903225806, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI27151736, Length=67, Percent_Identity=49.2537313432836, Blast_Score=66, Evalue=5e-11,
Organism=Homo sapiens, GI88501736, Length=67, Percent_Identity=49.2537313432836, Blast_Score=66, Evalue=5e-11,
Organism=Escherichia coli, GI1787235, Length=340, Percent_Identity=32.3529411764706, Blast_Score=148, Evalue=4e-37,
Organism=Escherichia coli, GI1786197, Length=338, Percent_Identity=30.7692307692308, Blast_Score=141, Evalue=5e-35,
Organism=Caenorhabditis elegans, GI17534355, Length=337, Percent_Identity=27.893175074184, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI212645553, Length=64, Percent_Identity=57.8125, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17554644, Length=97, Percent_Identity=44.3298969072165, Blast_Score=79, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17554900, Length=136, Percent_Identity=34.5588235294118, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI115532476, Length=64, Percent_Identity=54.6875, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI115532378, Length=115, Percent_Identity=34.7826086956522, Blast_Score=68, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI86563276, Length=68, Percent_Identity=47.0588235294118, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323813, Length=141, Percent_Identity=39.7163120567376, Blast_Score=72, Evalue=9e-14,
Organism=Saccharomyces cerevisiae, GI6323870, Length=72, Percent_Identity=45.8333333333333, Blast_Score=70, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6322194, Length=62, Percent_Identity=51.6129032258064, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24658562, Length=348, Percent_Identity=29.8850574712644, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24658555, Length=348, Percent_Identity=29.8850574712644, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI85726398, Length=347, Percent_Identity=29.6829971181556, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI18858081, Length=338, Percent_Identity=30.4733727810651, Blast_Score=108, Evalue=5e-24,
Organism=Drosophila melanogaster, GI19920464, Length=292, Percent_Identity=28.4246575342466, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI45552813, Length=63, Percent_Identity=50.7936507936508, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI45549272, Length=63, Percent_Identity=50.7936507936508, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI45552811, Length=63, Percent_Identity=50.7936507936508, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24645889, Length=62, Percent_Identity=48.3870967741936, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI21355911, Length=90, Percent_Identity=41.1111111111111, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24654066, Length=66, Percent_Identity=48.4848484848485, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24654070, Length=66, Percent_Identity=48.4848484848485, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24654068, Length=66, Percent_Identity=48.4848484848485, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24654072, Length=66, Percent_Identity=48.4848484848485, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI161077138, Length=66, Percent_Identity=48.4848484848485, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C [H]

EC number: NA

Molecular weight: Translated: 33974; Mature: 33843

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADPYATLGVSRTASEKEIKSAYRKLAKELHPDRNKDNPKAAERFSDVTNAYDLLSDKDQ
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHH
RARFDRGEIDAEGNPANPFAGMGGGFGGGNSGFGGGRGRQYTAEDFQGFGNDDVDLGDIF
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHH
EGLFGGGGARQRGGSPFGRRGPTPPPRKGADIAYRLRVPFVDAAARRDQRITLSDGKTID
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEHHHHCCCCEEEECCCCEEE
LKLPAGVEDGTQMRLKGKGEQGPGGAGDGIVTIAVEKHPFFEREGDNVRLDLPITLSEAV
EECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECEEHHHCC
HGAKVKVPTVDGAVMLTIKPGMSGGTVMRLSGKGFTGKSGKRGDQLVKLQIALPEDMSDL
CCCEEEEEECCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCHHHH
ETRLEGWQDEGNPRDKLGV
HHHHHCCCCCCCCHHCCCC
>Mature Secondary Structure 
ADPYATLGVSRTASEKEIKSAYRKLAKELHPDRNKDNPKAAERFSDVTNAYDLLSDKDQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHH
RARFDRGEIDAEGNPANPFAGMGGGFGGGNSGFGGGRGRQYTAEDFQGFGNDDVDLGDIF
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHH
EGLFGGGGARQRGGSPFGRRGPTPPPRKGADIAYRLRVPFVDAAARRDQRITLSDGKTID
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEHHHHCCCCEEEECCCCEEE
LKLPAGVEDGTQMRLKGKGEQGPGGAGDGIVTIAVEKHPFFEREGDNVRLDLPITLSEAV
EECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECEEHHHCC
HGAKVKVPTVDGAVMLTIKPGMSGGTVMRLSGKGFTGKSGKRGDQLVKLQIALPEDMSDL
CCCEEEEEECCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCHHHH
ETRLEGWQDEGNPRDKLGV
HHHHHCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]