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The map label for this gene is yrdA [H]

Identifier: 85375459

GI number: 85375459

Start: 2649098

End: 2649667

Strand: Direct

Name: yrdA [H]

Synonym: ELI_13160

Alternate gene names: 85375459

Gene position: 2649098-2649667 (Clockwise)

Preceding gene: 85375458

Following gene: 85375464

Centisome position: 86.79

GC content: 65.44

Gene sequence:

>570_bases
ATGACCACTCCGCCACCAGGTGTCCGCATCATTCCGATCCACGGCAACACGCCGCAGATCCACGACAGCGCTTTCGTCGC
GCCCGGCTGCGTGCTGGTGGGCGACGTGACGATCGGTGCGGACAGCTCGATCTGGTACAATTGCGTGCTGCGCGCCGACG
TCAGCCGGATCGTGATCGGCGAGCGGAGCAATGTTCAGGACGGCAGTGTTCTGCATTGCGATCCTGAACGTCCGGGCGAT
CCCGACGGCTCGCCGCTGCTGATCGGCGACGACGTGCTGATAGGCCATATGGCGATGGTCCACGGCTGCGTCATCGAGGA
CCGCGGCTTCGTCGGTCTCGGCGCGATCGCGATGAACAAGGCGGTCATCGGCAGCGACGCCATGCTGGCAGCGGGCGCGA
TGCTGACCGAAGGCAAGACAATGGCGCCGGGCAGCCTGTGGGCGGGCAGACCGGCCAAGCCGCTCAAGGACCTCAGCGAT
GCGGCCATCGCCGGCATGCGCATGGGCGTGGCGCATTATGTCGAAAATGGTCGCGCGCATAAGGCTGCGGTGAAAGCGAC
TGGCAACTGA

Upstream 100 bases:

>100_bases
AGCGCCGACAAGACCTGGATTTCGACGATCCTAAGTATCCGCCCGACGACAACCCCACGATCCAGTATTCGCTGACCAGA
AAACAATGGGAGCAGCAGCA

Downstream 100 bases:

>100_bases
CGCAAAGTCGCGCGGCGCGACTTTCGCTTAGTCCTGGATCATGGCCTTGAGCGTCTGGAGCCGGTCCGCTTCGTGCACCG
GCTTGTCCCAGCGGATGCGG

Product: hexapeptide transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MTTPPPGVRIIPIHGNTPQIHDSAFVAPGCVLVGDVTIGADSSIWYNCVLRADVSRIVIGERSNVQDGSVLHCDPERPGD
PDGSPLLIGDDVLIGHMAMVHGCVIEDRGFVGLGAIAMNKAVIGSDAMLAAGAMLTEGKTMAPGSLWAGRPAKPLKDLSD
AAIAGMRMGVAHYVENGRAHKAAVKATGN

Sequences:

>Translated_189_residues
MTTPPPGVRIIPIHGNTPQIHDSAFVAPGCVLVGDVTIGADSSIWYNCVLRADVSRIVIGERSNVQDGSVLHCDPERPGD
PDGSPLLIGDDVLIGHMAMVHGCVIEDRGFVGLGAIAMNKAVIGSDAMLAAGAMLTEGKTMAPGSLWAGRPAKPLKDLSD
AAIAGMRMGVAHYVENGRAHKAAVKATGN
>Mature_188_residues
TTPPPGVRIIPIHGNTPQIHDSAFVAPGCVLVGDVTIGADSSIWYNCVLRADVSRIVIGERSNVQDGSVLHCDPERPGDP
DGSPLLIGDDVLIGHMAMVHGCVIEDRGFVGLGAIAMNKAVIGSDAMLAAGAMLTEGKTMAPGSLWAGRPAKPLKDLSDA
AIAGMRMGVAHYVENGRAHKAAVKATGN

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=164, Percent_Identity=39.6341463414634, Blast_Score=136, Evalue=9e-34,
Organism=Escherichia coli, GI1787667, Length=164, Percent_Identity=35.9756097560976, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI87081681, Length=171, Percent_Identity=32.7485380116959, Blast_Score=95, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19509; Mature: 19378

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPPPGVRIIPIHGNTPQIHDSAFVAPGCVLVGDVTIGADSSIWYNCVLRADVSRIVIG
CCCCCCCEEEEEECCCCCCCCCCEEECCCEEEEEEEEECCCCCEEEEEEEECCCEEEEEC
ERSNVQDGSVLHCDPERPGDPDGSPLLIGDDVLIGHMAMVHGCVIEDRGFVGLGAIAMNK
CCCCCCCCCEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHCEEEECCCCEEECHHHHCC
AVIGSDAMLAAGAMLTEGKTMAPGSLWAGRPAKPLKDLSDAAIAGMRMGVAHYVENGRAH
EEECCCHHHHCCEEEECCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
KAAVKATGN
EEEEEECCC
>Mature Secondary Structure 
TTPPPGVRIIPIHGNTPQIHDSAFVAPGCVLVGDVTIGADSSIWYNCVLRADVSRIVIG
CCCCCCEEEEEECCCCCCCCCCEEECCCEEEEEEEEECCCCCEEEEEEEECCCEEEEEC
ERSNVQDGSVLHCDPERPGDPDGSPLLIGDDVLIGHMAMVHGCVIEDRGFVGLGAIAMNK
CCCCCCCCCEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHCEEEECCCCEEECHHHHCC
AVIGSDAMLAAGAMLTEGKTMAPGSLWAGRPAKPLKDLSDAAIAGMRMGVAHYVENGRAH
EEECCCHHHHCCEEEECCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
KAAVKATGN
EEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]