| Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
|---|---|
| Accession | NC_007722 |
| Length | 3,052,398 |
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The map label for this gene is 85375418
Identifier: 85375418
GI number: 85375418
Start: 2611636
End: 2612283
Strand: Reverse
Name: 85375418
Synonym: ELI_12955
Alternate gene names: NA
Gene position: 2612283-2611636 (Counterclockwise)
Preceding gene: 85375419
Following gene: 85375414
Centisome position: 85.58
GC content: 61.73
Gene sequence:
>648_bases ATGAGCCGCAAGACTTCTCACTTCACGCTGGTGGCCGTTGCCGCAAGCATGGTGATTACCGCTGTAAGTGCCGAGCTGTC GGGCGCCAATGCGCAGGCCAGCGAAGCCAGCCAGCCGATAGAACAGGCGCTGGTCGAAGAAACCGTTCCGGTTTTCGTGG CCGAAGAAGTGGTTCAGCCGCTTCCCGAAACCGAAGCAGCGCCCGCGCAGGAAGACAGTGCCCCCGAGGCCAACTCGCTG CGCGACCTCATTTCCGAGATTTCCGCTCCGCAGGAGCTTTCGCGCCAGATGGAATGCCTCGCCGGCGCCATCTACTTCGA ATCGCGCGGCGAGCCGCTCAACGGCCAGCTCGCGGTGGCGCAGGTCGTCATCAACCGCGCCGAATCGAATGTCTTCCCGT CGGATTATTGCGGCGTCGTCTACCAGCGCGCGCAGTTTTCTTTCGTGAAGAACGGCACGATGCCGCGGATCAAGCGTGGC TCAAGCGCGTGGAAGCAGGCCAAAAAGATCGCGCGCATCGCGCATGAAGGCCTGTGGGAGAGCGAAGCGCAGGATTCGCT CTATTTCCACGCCAATTACGTCAAGCCGCGTTGGAGCTATCGCAAGCAGCCGCGCGCCACGATCAAGACGCACATCTTCT ACCGCTGA
Upstream 100 bases:
>100_bases GACCGGCAGGTCCGTTCAGAACCGTAAAGCTAATACGCTTAATTCCTCCCTCGGTTCCCGCCTGCGTCTGGTTCGCTCAC CGCCGTAAGATTTGAGATTG
Downstream 100 bases:
>100_bases TTGTCGAATCAGTCAGCCCGCCCTGCCCGGACACGCTCCGGCAGGACAGGGTCGCAGGGAACCTCTTCGTGTCCGACGGG ATGCGGAGGGGTTTTCTATT
Product: hypothetical protein
Products: NA
Alternate protein names: Cell Wall Hydrolase Family; SleB-Like Protein; Hydrolase; Cell Wall Hydrolase; Spore Cortex-Lytic; Cell Wall Hydrolase Domain Protein; Hydrolase Domain Protein; Spore-Cortex-Lytic Prepeptide; Cell Wall Hydrolase Sleb; N-Acetylmuramoyl-L-Alanine Amidase; Cell Wall Hydrolase Domain-Containing Protein; Cell Wall Hydrolase Family Protein
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MSRKTSHFTLVAVAASMVITAVSAELSGANAQASEASQPIEQALVEETVPVFVAEEVVQPLPETEAAPAQEDSAPEANSL RDLISEISAPQELSRQMECLAGAIYFESRGEPLNGQLAVAQVVINRAESNVFPSDYCGVVYQRAQFSFVKNGTMPRIKRG SSAWKQAKKIARIAHEGLWESEAQDSLYFHANYVKPRWSYRKQPRATIKTHIFYR
Sequences:
>Translated_215_residues MSRKTSHFTLVAVAASMVITAVSAELSGANAQASEASQPIEQALVEETVPVFVAEEVVQPLPETEAAPAQEDSAPEANSL RDLISEISAPQELSRQMECLAGAIYFESRGEPLNGQLAVAQVVINRAESNVFPSDYCGVVYQRAQFSFVKNGTMPRIKRG SSAWKQAKKIARIAHEGLWESEAQDSLYFHANYVKPRWSYRKQPRATIKTHIFYR >Mature_214_residues SRKTSHFTLVAVAASMVITAVSAELSGANAQASEASQPIEQALVEETVPVFVAEEVVQPLPETEAAPAQEDSAPEANSLR DLISEISAPQELSRQMECLAGAIYFESRGEPLNGQLAVAQVVINRAESNVFPSDYCGVVYQRAQFSFVKNGTMPRIKRGS SAWKQAKKIARIAHEGLWESEAQDSLYFHANYVKPRWSYRKQPRATIKTHIFYR
Specific function: Unknown
COG id: COG3773
COG function: function code M; Cell wall hydrolyses involved in spore germination
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23774; Mature: 23643
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKTSHFTLVAVAASMVITAVSAELSGANAQASEASQPIEQALVEETVPVFVAEEVVQP CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC LPETEAAPAQEDSAPEANSLRDLISEISAPQELSRQMECLAGAIYFESRGEPLNGQLAVA CCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH QVVINRAESNVFPSDYCGVVYQRAQFSFVKNGTMPRIKRGSSAWKQAKKIARIAHEGLWE HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHCCCC SEAQDSLYFHANYVKPRWSYRKQPRATIKTHIFYR CCCCCCEEEEEECCCCCCCCCCCCCHHHHHHEECC >Mature Secondary Structure SRKTSHFTLVAVAASMVITAVSAELSGANAQASEASQPIEQALVEETVPVFVAEEVVQP CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC LPETEAAPAQEDSAPEANSLRDLISEISAPQELSRQMECLAGAIYFESRGEPLNGQLAVA CCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH QVVINRAESNVFPSDYCGVVYQRAQFSFVKNGTMPRIKRGSSAWKQAKKIARIAHEGLWE HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHCCCC SEAQDSLYFHANYVKPRWSYRKQPRATIKTHIFYR CCCCCCEEEEEECCCCCCCCCCCCCHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA