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The map label for this gene is yfhC [C]

Identifier: 85375364

GI number: 85375364

Start: 2565984

End: 2566412

Strand: Reverse

Name: yfhC [C]

Synonym: ELI_12685

Alternate gene names: 85375364

Gene position: 2566412-2565984 (Counterclockwise)

Preceding gene: 85375366

Following gene: 85375360

Centisome position: 84.08

GC content: 65.73

Gene sequence:

>429_bases
ATGCGCTTAGCGCTCGAGGAAGCACGCAAGGCTGCCGATGCCGGCGAAGTCCCGATTGGGGCGGTGGTGGTGAAGGGCGA
GAAAGTAATCGTTGCGGCCCACAATTCGCCGCGCACCGACCATGATCCCACCGCCCATGCCGAGATCGCCGCAATTCGTG
CCGCCGCCAAGGCGCTAGGGCAGGAACGGCTGGAAGGCTGCGACCTGTGGGTGACACTGGAGCCCTGCGCAATGTGCGCA
GGCGCGATCAGCCACGCCCGCATCGCGCGACTCTATTACGCGGCCAGCGACCCCAAGGGCGGCGCTGTGGAGCACGGCGC
CAAGGTGTTCGACCACTCACAATGCCTGCACGCTCCGGAGGTATATTCAGGCATGGGCGAGGACGAAGCGGCGGACATGC
TGCGTGGGTTTTTCAGGGAGCGGCGCTGA

Upstream 100 bases:

>100_bases
CGCATAGCGGCGGAGGGGCGAATCGTCAACACGAGTCTGGCCTTCCGGGCCGAGCGCGCGTAGCGGCTTTGGCATGACCC
GCTGGCCATTACCAGACCCA

Downstream 100 bases:

>100_bases
CTCACATGTCCGCAGTTGCGGCAAGTGAAAAGCCTGAATCGATCTCTATACATCTATAACGACCAGGCACCACAGACAGC
GCCGGGTCTTCATTGTAAGG

Product: nitrogen fixation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MRLALEEARKAADAGEVPIGAVVVKGEKVIVAAHNSPRTDHDPTAHAEIAAIRAAAKALGQERLEGCDLWVTLEPCAMCA
GAISHARIARLYYAASDPKGGAVEHGAKVFDHSQCLHAPEVYSGMGEDEAADMLRGFFRERR

Sequences:

>Translated_142_residues
MRLALEEARKAADAGEVPIGAVVVKGEKVIVAAHNSPRTDHDPTAHAEIAAIRAAAKALGQERLEGCDLWVTLEPCAMCA
GAISHARIARLYYAASDPKGGAVEHGAKVFDHSQCLHAPEVYSGMGEDEAADMLRGFFRERR
>Mature_142_residues
MRLALEEARKAADAGEVPIGAVVVKGEKVIVAAHNSPRTDHDPTAHAEIAAIRAAAKALGQERLEGCDLWVTLEPCAMCA
GAISHARIARLYYAASDPKGGAVEHGAKVFDHSQCLHAPEVYSGMGEDEAADMLRGFFRERR

Specific function: Mutation In This Protein Makes E.Coli Resistant To The Toxic Proteins Encoded By The Gef Gene Family. [C]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Escherichia coli, GI145693172, Length=142, Percent_Identity=46.4788732394366, Blast_Score=120, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI17554608, Length=111, Percent_Identity=41.4414414414414, Blast_Score=90, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17555996, Length=112, Percent_Identity=38.3928571428571, Blast_Score=69, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17541138, Length=138, Percent_Identity=30.4347826086957, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21355527, Length=146, Percent_Identity=34.2465753424658, Blast_Score=77, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 15174; Mature: 15174

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLALEEARKAADAGEVPIGAVVVKGEKVIVAAHNSPRTDHDPTAHAEIAAIRAAAKALG
CCCCHHHHHHHCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
QERLEGCDLWVTLEPCAMCAGAISHARIARLYYAASDPKGGAVEHGAKVFDHSQCLHAPE
HHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHCCCCH
VYSGMGEDEAADMLRGFFRERR
HHCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLALEEARKAADAGEVPIGAVVVKGEKVIVAAHNSPRTDHDPTAHAEIAAIRAAAKALG
CCCCHHHHHHHCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
QERLEGCDLWVTLEPCAMCAGAISHARIARLYYAASDPKGGAVEHGAKVFDHSQCLHAPE
HHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHCCCCH
VYSGMGEDEAADMLRGFFRERR
HHCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA