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The map label for this gene is yjiR [C]

Identifier: 85375323

GI number: 85375323

Start: 2525415

End: 2525771

Strand: Reverse

Name: yjiR [C]

Synonym: ELI_12480

Alternate gene names: 85375323

Gene position: 2525771-2525415 (Counterclockwise)

Preceding gene: 85375328

Following gene: 85375322

Centisome position: 82.75

GC content: 64.99

Gene sequence:

>357_bases
ATGAGTACTTCGAGCCGCCCCGTCTACCTGCGCCTGCGCGACATCATCGCCGCCGCCATCATGGAAGGCCGTTATGGGGA
GGGCGACATGCTGCCTTCGGTTCGGGCCTTTGCGGCCGAGCAGGGCGCGAACCCCCTCACTGTCGCCAAGGCCTACCAGC
AATTCCAGAACGACGGGCTGGTCGAGGTGCAGCGCGGCGTCGGCATGTATGTCGTGGAGGGTGCGGCGGAGAAACTGCGC
AAGGCCGAGCGCGACGTATTCCTGGCCGAGGAATGGCCGGAAATCCGGTCGCGGATCAGGCGTTTGGGCCTCGATACGGC
GCAACTTCTCGCTACCGGGCGTGCCGAAACTGTTTGA

Upstream 100 bases:

>100_bases
CGATGTGAAGATATTGTTTCAGGCGAAACCGCTTTTCCCGGCAAACCCCCGGGTATCACTCCCTTGACCTGACACGGTGT
ATTATGGCACTGAAGCACCC

Downstream 100 bases:

>100_bases
GCCGCAACAGTTTTCTGAAATTTTCGGGCTTCGGTTTGCGCGAGGGCCGTGGTTCTGCCATTATCTGACTTTCCGGCAGG
GGCTAAGCCGCTGCTGGATA

Product: transcriptional regulator, GntR family protein

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator Gntr Family; Transcriptional Regulator; Transcriptional Regulator GntR Family Protein; GntR-Family Transcriptional Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator Transcription Regulator Protein

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MSTSSRPVYLRLRDIIAAAIMEGRYGEGDMLPSVRAFAAEQGANPLTVAKAYQQFQNDGLVEVQRGVGMYVVEGAAEKLR
KAERDVFLAEEWPEIRSRIRRLGLDTAQLLATGRAETV

Sequences:

>Translated_118_residues
MSTSSRPVYLRLRDIIAAAIMEGRYGEGDMLPSVRAFAAEQGANPLTVAKAYQQFQNDGLVEVQRGVGMYVVEGAAEKLR
KAERDVFLAEEWPEIRSRIRRLGLDTAQLLATGRAETV
>Mature_117_residues
STSSRPVYLRLRDIIAAAIMEGRYGEGDMLPSVRAFAAEQGANPLTVAKAYQQFQNDGLVEVQRGVGMYVVEGAAEKLRK
AERDVFLAEEWPEIRSRIRRLGLDTAQLLATGRAETV

Specific function: Unknown

COG id: COG1725

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13070; Mature: 12939

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSSRPVYLRLRDIIAAAIMEGRYGEGDMLPSVRAFAAEQGANPLTVAKAYQQFQNDGL
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
VEVQRGVGMYVVEGAAEKLRKAERDVFLAEEWPEIRSRIRRLGLDTAQLLATGRAETV
EEECCCCCEEEEHHHHHHHHHHHHCEECHHCCHHHHHHHHHHCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
STSSRPVYLRLRDIIAAAIMEGRYGEGDMLPSVRAFAAEQGANPLTVAKAYQQFQNDGL
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
VEVQRGVGMYVVEGAAEKLRKAERDVFLAEEWPEIRSRIRRLGLDTAQLLATGRAETV
EEECCCCCEEEEHHHHHHHHHHHHCEECHHCCHHHHHHHHHHCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA