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The map label for this gene is wza [H]

Identifier: 85375265

GI number: 85375265

Start: 2463956

End: 2464669

Strand: Direct

Name: wza [H]

Synonym: ELI_12190

Alternate gene names: 85375265

Gene position: 2463956-2464669 (Clockwise)

Preceding gene: 85375264

Following gene: 85375266

Centisome position: 80.72

GC content: 64.15

Gene sequence:

>714_bases
TTGATTCCATTCGCGCTGGCGCTGGCCGCGTGCGGGACCGGACCCGATCCTGTCCTGCCCGCCGGAAGCGCGGCATACGA
TGCGATACCCGAAGGCAACGTGTTCGCCCCGCGCCGGGTTGAAATCGGCCCCAGCGACACCCTGAAAGTGACGGTTTTCC
GGGAGCCCGATCTGTCGCTGGAAGGCGCGACGGTCGATCCCGACGGCAACATCCAGGTGCCGCTGCTCGGCACGGTCGAC
GCGACCGGCATGACGGCAGCCGAATTCGCCCGCGATCTCGAGCGGCGCTTTGCCGCCAGGTTTCTCGTCGACCCGAGCGT
GACGGTCTCCATCACGCAGACCTCGCAGAGGCAGGTAACCGTTGCCGGGGCAGTGACCCAGCCAGGCGTCTACGAGATCC
CCGGGCGCATTTCTCTGATCGATGCCGTTTCCCTCGCCCGCGGGCCGACCAATGTCGCGAAATACGATCAGGTCGTGGTG
TTTCGCCGTTTCAACGGCGAACGTGTTGGCGGGATATTCGATCTCGGAAGAATCAACGCCGGGCTAGCGCCCGATATCGA
AATTCTCGGCGGCGATCAGGTGCTGGTCGGAACGGACGGCCTCAAGGTTGCCTATCGCGATGCCCTGCAGGCTGCACCCC
TGCTCAACATCTTTACGACCTTCGCCTTGGTGGATCGCGACGGCAACCAGTCGGCCGGCGAACCTGCCAATTAA

Upstream 100 bases:

>100_bases
CGAACGCCATTGCCTTCGAAGCGCGACGACGGTTAAAGTCTTCGCAGGATCCGGGGGGTTGGAAGGGACGCAGTCGGCTA
TGCTGCCAAGGCTTACTCTA

Downstream 100 bases:

>100_bases
CCGGAAGCACTCGCCCATATGAACGCACCCGCCCCTACCGTCGATCCATCCAAAGAGGCGTTCTCCGACGAGCGGGGCAT
GCCCAATTTCGGGATCGACC

Product: GumB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MIPFALALAACGTGPDPVLPAGSAAYDAIPEGNVFAPRRVEIGPSDTLKVTVFREPDLSLEGATVDPDGNIQVPLLGTVD
ATGMTAAEFARDLERRFAARFLVDPSVTVSITQTSQRQVTVAGAVTQPGVYEIPGRISLIDAVSLARGPTNVAKYDQVVV
FRRFNGERVGGIFDLGRINAGLAPDIEILGGDQVLVGTDGLKVAYRDALQAAPLLNIFTTFALVDRDGNQSAGEPAN

Sequences:

>Translated_237_residues
MIPFALALAACGTGPDPVLPAGSAAYDAIPEGNVFAPRRVEIGPSDTLKVTVFREPDLSLEGATVDPDGNIQVPLLGTVD
ATGMTAAEFARDLERRFAARFLVDPSVTVSITQTSQRQVTVAGAVTQPGVYEIPGRISLIDAVSLARGPTNVAKYDQVVV
FRRFNGERVGGIFDLGRINAGLAPDIEILGGDQVLVGTDGLKVAYRDALQAAPLLNIFTTFALVDRDGNQSAGEPAN
>Mature_237_residues
MIPFALALAACGTGPDPVLPAGSAAYDAIPEGNVFAPRRVEIGPSDTLKVTVFREPDLSLEGATVDPDGNIQVPLLGTVD
ATGMTAAEFARDLERRFAARFLVDPSVTVSITQTSQRQVTVAGAVTQPGVYEIPGRISLIDAVSLARGPTNVAKYDQVVV
FRRFNGERVGGIFDLGRINAGLAPDIEILGGDQVLVGTDGLKVAYRDALQAAPLLNIFTTFALVDRDGNQSAGEPAN

Specific function: Probably involved in the export of the extracellular polysaccharide colanic acid from the cell to medium [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1788376, Length=148, Percent_Identity=30.4054054054054, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715
- InterPro:   IPR019554 [H]

Pfam domain/function: PF02563 Poly_export; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 24847; Mature: 24847

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPFALALAACGTGPDPVLPAGSAAYDAIPEGNVFAPRRVEIGPSDTLKVTVFREPDLSL
CCHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCEECCEEEEECCCCCEEEEEEECCCCCC
EGATVDPDGNIQVPLLGTVDATGMTAAEFARDLERRFAARFLVDPSVTVSITQTSQRQVT
CCCEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHEEECCCEEEEEEECCCEEEE
VAGAVTQPGVYEIPGRISLIDAVSLARGPTNVAKYDQVVVFRRFNGERVGGIFDLGRINA
EEECCCCCCEEECCCCEEEEEHHHHCCCCCCHHCCCEEEEEEECCCCCCCCEEEECCCCC
GLAPDIEILGGDQVLVGTDGLKVAYRDALQAAPLLNIFTTFALVDRDGNQSAGEPAN
CCCCCEEEECCCEEEEECCCCCHHHHHHHHHCHHHHHHHEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MIPFALALAACGTGPDPVLPAGSAAYDAIPEGNVFAPRRVEIGPSDTLKVTVFREPDLSL
CCHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCEECCEEEEECCCCCEEEEEEECCCCCC
EGATVDPDGNIQVPLLGTVDATGMTAAEFARDLERRFAARFLVDPSVTVSITQTSQRQVT
CCCEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHEEECCCEEEEEEECCCEEEE
VAGAVTQPGVYEIPGRISLIDAVSLARGPTNVAKYDQVVVFRRFNGERVGGIFDLGRINA
EEECCCCCCEEECCCCEEEEEHHHHCCCCCCHHCCCEEEEEEECCCCCCCCEEEECCCCC
GLAPDIEILGGDQVLVGTDGLKVAYRDALQAAPLLNIFTTFALVDRDGNQSAGEPAN
CCCCCEEEECCCEEEEECCCCCHHHHHHHHHCHHHHHHHEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]