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The map label for this gene is yngJ [H]

Identifier: 85375232

GI number: 85375232

Start: 2424151

End: 2425341

Strand: Direct

Name: yngJ [H]

Synonym: ELI_12025

Alternate gene names: 85375232

Gene position: 2424151-2425341 (Clockwise)

Preceding gene: 85375231

Following gene: 85375233

Centisome position: 79.42

GC content: 63.39

Gene sequence:

>1191_bases
ATGGCCGACACCATCCTGCATCCCGGCATGGATGCCGATACGTTCGAACAGTTCATCGAGCAGCTCGATCGCTATGTCCG
CGAACGGCTGATCCCGGCCGAGCGGGAAACGATCGAGAACGACAGGATCCCCGACGAGATCGTCGAGGAGATGAAGGAGA
TGGGCCTGTTCGGCCTGACCGTGCCGGAAGAATATGGCGGCGCGGGCCTCAACACCTCGCAATATGCCCGCGTGGTCAAC
ACCATGGCCTATGCCGCGCCGGCCTATCGCAGCATCTTTTCGATCAATGTCGGCATGTTCAATTCCGCGATCAAGAACGG
AGCGACTGACGCGCAGAAAGCCGAATGGTGGCCCCGCATCGCTGCCGGCGAGATCGCCTGCTTCGGCCTGACCGAACCGG
GCTCGGGCTCCGACAGTGCCGCGATGGCAACCACCGCCAGGCCCGATCCCGATGGCAATGGCTGGATCCTCAATGGCACC
AAGCGCTACATCACCAATGCGCCGCATGCCGATGTCGGCCTGATCATGGCGCGCACAGAGAAGGAAGCGCTGCCCAAGAA
CGCCCATGTCAGCGCCTTCATCGTGCCGATGGATACGCCGGGCGTGACGACCGCCAGCCCCGACAAGAAGATGGGGCAGG
AAGGCAGCCACATCTCGGACGTGATCCTCGAGGACGTGAAGGTCCCGGGCGACGCGCTGCTCGGCGGGGAAACCGGACGA
GGCTTCCGCTTCGCCATGATGAGCCTGGATAACGGCCGCATTTCGGTTGGCGCGGCTGCCGCAGGCTATGCCCGCCGCGC
GCTCGACAGCGCGGTGCGCTATGCCACCGAGCGCAAGGCCTTCGGCGAACCGATCGCCAATTTCCAGCTCATCCAGCAGA
TGCTCGCGGAGAGCGAGACCGAAATCTACGCTGCCGAGGCGATGATGAAGGACGTGTGCGAACGCGCCGATCGCGGCGAA
AACATCCTGCGCAAGGCGGCGGCCTTCAAGGTGTTCTCGTCCGAAATGTGCGGCCGCGTGGTCGACCGCGTCGTGCAAGT
CTATGGCGGCGCCGGCTATCTCGCCGAATACGATGCCGAACGCTTTTTCCGCGATGCCCGCATCTATCGCATCTACGAAG
GCACGACGCAGATCCTCTACCTGCAGATCGCCAAGCACATGCTGCGCGATTTCGCGGCGCAGAACGGGTGA

Upstream 100 bases:

>100_bases
GCCTCCGCAAGCGCTGGACAACCCGCCCGCGCCCGCGCAGGACACCGACCTACAAACGCAACAGGCGCCCGAGCAAGCGC
AGCAATAAGAGGACCGCCCG

Downstream 100 bases:

>100_bases
TCGTGATTAAGCCCACCCCGCTGCGACTAGCCAGCAAGCTGGCAAGTCTCGCTCCCCTCCCGCATGCGGGAGGGGCAGTG
AAGCTTGGCGAACCACAGGT

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MADTILHPGMDADTFEQFIEQLDRYVRERLIPAERETIENDRIPDEIVEEMKEMGLFGLTVPEEYGGAGLNTSQYARVVN
TMAYAAPAYRSIFSINVGMFNSAIKNGATDAQKAEWWPRIAAGEIACFGLTEPGSGSDSAAMATTARPDPDGNGWILNGT
KRYITNAPHADVGLIMARTEKEALPKNAHVSAFIVPMDTPGVTTASPDKKMGQEGSHISDVILEDVKVPGDALLGGETGR
GFRFAMMSLDNGRISVGAAAAGYARRALDSAVRYATERKAFGEPIANFQLIQQMLAESETEIYAAEAMMKDVCERADRGE
NILRKAAAFKVFSSEMCGRVVDRVVQVYGGAGYLAEYDAERFFRDARIYRIYEGTTQILYLQIAKHMLRDFAAQNG

Sequences:

>Translated_396_residues
MADTILHPGMDADTFEQFIEQLDRYVRERLIPAERETIENDRIPDEIVEEMKEMGLFGLTVPEEYGGAGLNTSQYARVVN
TMAYAAPAYRSIFSINVGMFNSAIKNGATDAQKAEWWPRIAAGEIACFGLTEPGSGSDSAAMATTARPDPDGNGWILNGT
KRYITNAPHADVGLIMARTEKEALPKNAHVSAFIVPMDTPGVTTASPDKKMGQEGSHISDVILEDVKVPGDALLGGETGR
GFRFAMMSLDNGRISVGAAAAGYARRALDSAVRYATERKAFGEPIANFQLIQQMLAESETEIYAAEAMMKDVCERADRGE
NILRKAAAFKVFSSEMCGRVVDRVVQVYGGAGYLAEYDAERFFRDARIYRIYEGTTQILYLQIAKHMLRDFAAQNG
>Mature_395_residues
ADTILHPGMDADTFEQFIEQLDRYVRERLIPAERETIENDRIPDEIVEEMKEMGLFGLTVPEEYGGAGLNTSQYARVVNT
MAYAAPAYRSIFSINVGMFNSAIKNGATDAQKAEWWPRIAAGEIACFGLTEPGSGSDSAAMATTARPDPDGNGWILNGTK
RYITNAPHADVGLIMARTEKEALPKNAHVSAFIVPMDTPGVTTASPDKKMGQEGSHISDVILEDVKVPGDALLGGETGRG
FRFAMMSLDNGRISVGAAAAGYARRALDSAVRYATERKAFGEPIANFQLIQQMLAESETEIYAAEAMMKDVCERADRGEN
ILRKAAAFKVFSSEMCGRVVDRVVQVYGGAGYLAEYDAERFFRDARIYRIYEGTTQILYLQIAKHMLRDFAAQNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=380, Percent_Identity=37.3684210526316, Blast_Score=262, Evalue=4e-70,
Organism=Homo sapiens, GI4557235, Length=382, Percent_Identity=37.9581151832461, Blast_Score=239, Evalue=4e-63,
Organism=Homo sapiens, GI76496475, Length=382, Percent_Identity=37.9581151832461, Blast_Score=239, Evalue=5e-63,
Organism=Homo sapiens, GI21361497, Length=380, Percent_Identity=36.3157894736842, Blast_Score=230, Evalue=1e-60,
Organism=Homo sapiens, GI4501859, Length=366, Percent_Identity=31.4207650273224, Blast_Score=218, Evalue=1e-56,
Organism=Homo sapiens, GI226958412, Length=379, Percent_Identity=31.1345646437995, Blast_Score=209, Evalue=2e-54,
Organism=Homo sapiens, GI187960098, Length=378, Percent_Identity=33.3333333333333, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI4557231, Length=378, Percent_Identity=33.3333333333333, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI226958414, Length=348, Percent_Identity=32.4712643678161, Blast_Score=202, Evalue=4e-52,
Organism=Homo sapiens, GI4501857, Length=376, Percent_Identity=31.9148936170213, Blast_Score=185, Evalue=5e-47,
Organism=Homo sapiens, GI7656849, Length=372, Percent_Identity=29.3010752688172, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI4503943, Length=366, Percent_Identity=30.0546448087432, Blast_Score=157, Evalue=1e-38,
Organism=Homo sapiens, GI7669494, Length=354, Percent_Identity=29.9435028248588, Blast_Score=152, Evalue=5e-37,
Organism=Homo sapiens, GI48976061, Length=413, Percent_Identity=29.0556900726392, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI211971008, Length=413, Percent_Identity=29.0556900726392, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI38505218, Length=402, Percent_Identity=26.1194029850746, Blast_Score=131, Evalue=9e-31,
Organism=Escherichia coli, GI87081958, Length=359, Percent_Identity=30.6406685236769, Blast_Score=147, Evalue=8e-37,
Organism=Escherichia coli, GI1786223, Length=350, Percent_Identity=29.1428571428571, Blast_Score=138, Evalue=7e-34,
Organism=Escherichia coli, GI87081702, Length=334, Percent_Identity=28.1437125748503, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI87082384, Length=275, Percent_Identity=24, Blast_Score=73, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI71985184, Length=369, Percent_Identity=36.8563685636856, Blast_Score=219, Evalue=3e-57,
Organism=Caenorhabditis elegans, GI17569725, Length=380, Percent_Identity=34.2105263157895, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17534899, Length=388, Percent_Identity=33.5051546391753, Blast_Score=212, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI17570075, Length=398, Percent_Identity=35.1758793969849, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17506239, Length=378, Percent_Identity=31.2169312169312, Blast_Score=204, Evalue=7e-53,
Organism=Caenorhabditis elegans, GI17508101, Length=362, Percent_Identity=30.6629834254144, Blast_Score=198, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI17538396, Length=363, Percent_Identity=29.4765840220386, Blast_Score=186, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI71985192, Length=303, Percent_Identity=35.6435643564356, Blast_Score=173, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI17533517, Length=390, Percent_Identity=26.4102564102564, Blast_Score=164, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI17534353, Length=365, Percent_Identity=28.7671232876712, Blast_Score=160, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI71990804, Length=282, Percent_Identity=31.5602836879433, Blast_Score=154, Evalue=7e-38,
Organism=Caenorhabditis elegans, GI17505929, Length=376, Percent_Identity=29.2553191489362, Blast_Score=150, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI17551932, Length=369, Percent_Identity=27.9132791327913, Blast_Score=140, Evalue=9e-34,
Organism=Caenorhabditis elegans, GI71982178, Length=273, Percent_Identity=29.6703296703297, Blast_Score=139, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI32563615, Length=234, Percent_Identity=32.4786324786325, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI17562446, Length=369, Percent_Identity=28.4552845528455, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17531909, Length=250, Percent_Identity=30.4, Blast_Score=113, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI86563383, Length=283, Percent_Identity=25.0883392226148, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI86563381, Length=283, Percent_Identity=25.0883392226148, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI21356377, Length=351, Percent_Identity=37.037037037037, Blast_Score=231, Evalue=6e-61,
Organism=Drosophila melanogaster, GI24646207, Length=381, Percent_Identity=35.1706036745407, Blast_Score=228, Evalue=6e-60,
Organism=Drosophila melanogaster, GI281363737, Length=384, Percent_Identity=35.6770833333333, Blast_Score=226, Evalue=3e-59,
Organism=Drosophila melanogaster, GI24660351, Length=373, Percent_Identity=32.7077747989276, Blast_Score=205, Evalue=4e-53,
Organism=Drosophila melanogaster, GI24666513, Length=376, Percent_Identity=32.1808510638298, Blast_Score=205, Evalue=5e-53,
Organism=Drosophila melanogaster, GI21355753, Length=387, Percent_Identity=28.4237726098191, Blast_Score=172, Evalue=3e-43,
Organism=Drosophila melanogaster, GI19920834, Length=368, Percent_Identity=29.8913043478261, Blast_Score=143, Evalue=2e-34,
Organism=Drosophila melanogaster, GI281365206, Length=415, Percent_Identity=24.3373493975904, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24585193, Length=415, Percent_Identity=24.3373493975904, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24585195, Length=415, Percent_Identity=24.3373493975904, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24585191, Length=415, Percent_Identity=24.3373493975904, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24652780, Length=351, Percent_Identity=21.3675213675214, Blast_Score=69, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 43407; Mature: 43275

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTILHPGMDADTFEQFIEQLDRYVRERLIPAERETIENDRIPDEIVEEMKEMGLFGLT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHCCEEECC
VPEEYGGAGLNTSQYARVVNTMAYAAPAYRSIFSINVGMFNSAIKNGATDAQKAEWWPRI
CCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHCCCC
AAGEIACFGLTEPGSGSDSAAMATTARPDPDGNGWILNGTKRYITNAPHADVGLIMARTE
CCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCEEECCCHHHHCCCCCCCCEEEEEECH
KEALPKNAHVSAFIVPMDTPGVTTASPDKKMGQEGSHISDVILEDVKVPGDALLGGETGR
HHHCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCEECCCCCC
GFRFAMMSLDNGRISVGAAAAGYARRALDSAVRYATERKAFGEPIANFQLIQQMLAESET
CEEEEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHH
EIYAAEAMMKDVCERADRGENILRKAAAFKVFSSEMCGRVVDRVVQVYGGAGYLAEYDAE
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RFFRDARIYRIYEGTTQILYLQIAKHMLRDFAAQNG
HHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ADTILHPGMDADTFEQFIEQLDRYVRERLIPAERETIENDRIPDEIVEEMKEMGLFGLT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHCCEEECC
VPEEYGGAGLNTSQYARVVNTMAYAAPAYRSIFSINVGMFNSAIKNGATDAQKAEWWPRI
CCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHCCCC
AAGEIACFGLTEPGSGSDSAAMATTARPDPDGNGWILNGTKRYITNAPHADVGLIMARTE
CCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCEEECCCHHHHCCCCCCCCEEEEEECH
KEALPKNAHVSAFIVPMDTPGVTTASPDKKMGQEGSHISDVILEDVKVPGDALLGGETGR
HHHCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCCCEECCCCCC
GFRFAMMSLDNGRISVGAAAAGYARRALDSAVRYATERKAFGEPIANFQLIQQMLAESET
CEEEEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHH
EIYAAEAMMKDVCERADRGENILRKAAAFKVFSSEMCGRVVDRVVQVYGGAGYLAEYDAE
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RFFRDARIYRIYEGTTQILYLQIAKHMLRDFAAQNG
HHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]