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The map label for this gene is 85375228

Identifier: 85375228

GI number: 85375228

Start: 2420538

End: 2421452

Strand: Reverse

Name: 85375228

Synonym: ELI_12005

Alternate gene names: NA

Gene position: 2421452-2420538 (Counterclockwise)

Preceding gene: 85375229

Following gene: 85375227

Centisome position: 79.33

GC content: 62.19

Gene sequence:

>915_bases
ATGGTCAATGTTTTGGACGGGATGAATGTCAGCCAAGAGAGAGGCTCCAAGACCTACAATGGCTATGTGATGCTGCTGGT
CCTGCTGGCGGTTACGGTCCTCGCGTTCCTATGGATGAGCACGAGTTTTCCGCCGGGCCCCGAGAAGGCCAGCAAGATCT
ATTTCGTATTCAAGCTGGTTGCGTCGCTGACCGGTTTCCTTGTCGTCGCCACCGGGTTTTTCATGATCCAGCCCAACCAG
ACCGCGGTGATCACCCTTTTCGGAGCCTATAGCGGCACCGAGCGAACCGAGGGGCTGCGCTGGGTGTGGCCGTGGATGAT
GCGCAAGAAGATCAGCGCCCGTGCGCACAATGTCCATTCGGAGAAGGTCAAGATCAACGATCTGCGCGGCAACCCGATCG
AGATCGCCTGCAACACCGTCTGGCGGGTGCGTGACACCGCGCAGGCGGCCTTCGATGTCGACGATTACAAGGAATTCGTG
AACATTCAGATCGAGGCCGGGCTACGCACGGTCGGCGCGCGGCACCCCTATGACGACATGAGCGAGGAAGACGCGACGAC
GCTGCGCGGCAGCGCCGACGTGGTCAACCGCGAGCTGCAGGAAGAGCTCAACGAGCGCCTCAAGGTCGCCGGTATCGTTG
TCGACGAAGCGGGGCTGACCCACCTCGCCTATGCACCGGAGATCGCCGGGGCGATGCTGCGCCGCCAGCAGGCCGATGCC
GTCATCGCCGCGCGCAAGAAAGTCGTGATCGGCGCGGTCGGCATGGTCGAGGATGCGCTGGCCAAATTGTCGGCGGATGG
CGTGGTCGATCTCGACGACGAGCGTCGGGCTGCGATGGTCAGCAACTTGATGGTCGTGCTGTGCGGCGATCGCGAAGCGC
ATCCGGTGGTCAATGCCGGCACGCTCTACCAGTAG

Upstream 100 bases:

>100_bases
TGCATCCGGAGACACTGACACCGGATTGACGGAATTTGTTTGACTTGCGGGCCGTCCGATATAAAGATGATATCATAGTT
ATATCGAAAGGACTGATCCG

Downstream 100 bases:

>100_bases
GCTTTGAGGCGAGGAGGCAGCCATGGCGGCCGCCAAGAAGAAAGCCTTTGCCCTACGGCTCGACCCGGCGGTTCACGCCG
CGGTCGAGCGGCTCGCGGCG

Product: putative integral membrane protein

Products: NA

Alternate protein names: Integral Membrane Protein; SPFH Domain/Band 7 Family Protein; SPFH Domain-Containing Protein/Band 7 Family Protein; Somatin-Like Protein; Band 7 Family Protein; SPFH Domain / Band 7 Family Protein; SPFH Domain-Containing Protein; Integral Membrane Protease Subunit; SPFH/Band 7 Domain-Containing Protein; Transmembrane Protein; HFLK Protein; Membrane Protease Family Stomatin/Prohibitin-Like Protein; Membrane Protease Subunits Stomatin/Prohibitin Homologs; Band 7 Family Membrane Protein; Membrane Protease Subunit Stomatin/Prohibitin

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MVNVLDGMNVSQERGSKTYNGYVMLLVLLAVTVLAFLWMSTSFPPGPEKASKIYFVFKLVASLTGFLVVATGFFMIQPNQ
TAVITLFGAYSGTERTEGLRWVWPWMMRKKISARAHNVHSEKVKINDLRGNPIEIACNTVWRVRDTAQAAFDVDDYKEFV
NIQIEAGLRTVGARHPYDDMSEEDATTLRGSADVVNRELQEELNERLKVAGIVVDEAGLTHLAYAPEIAGAMLRRQQADA
VIAARKKVVIGAVGMVEDALAKLSADGVVDLDDERRAAMVSNLMVVLCGDREAHPVVNAGTLYQ

Sequences:

>Translated_304_residues
MVNVLDGMNVSQERGSKTYNGYVMLLVLLAVTVLAFLWMSTSFPPGPEKASKIYFVFKLVASLTGFLVVATGFFMIQPNQ
TAVITLFGAYSGTERTEGLRWVWPWMMRKKISARAHNVHSEKVKINDLRGNPIEIACNTVWRVRDTAQAAFDVDDYKEFV
NIQIEAGLRTVGARHPYDDMSEEDATTLRGSADVVNRELQEELNERLKVAGIVVDEAGLTHLAYAPEIAGAMLRRQQADA
VIAARKKVVIGAVGMVEDALAKLSADGVVDLDDERRAAMVSNLMVVLCGDREAHPVVNAGTLYQ
>Mature_304_residues
MVNVLDGMNVSQERGSKTYNGYVMLLVLLAVTVLAFLWMSTSFPPGPEKASKIYFVFKLVASLTGFLVVATGFFMIQPNQ
TAVITLFGAYSGTERTEGLRWVWPWMMRKKISARAHNVHSEKVKINDLRGNPIEIACNTVWRVRDTAQAAFDVDDYKEFV
NIQIEAGLRTVGARHPYDDMSEEDATTLRGSADVVNRELQEELNERLKVAGIVVDEAGLTHLAYAPEIAGAMLRRQQADA
VIAARKKVVIGAVGMVEDALAKLSADGVVDLDDERRAAMVSNLMVVLCGDREAHPVVNAGTLYQ

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33492; Mature: 33492

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNVLDGMNVSQERGSKTYNGYVMLLVLLAVTVLAFLWMSTSFPPGPEKASKIYFVFKLV
CCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
ASLTGFLVVATGFFMIQPNQTAVITLFGAYSGTERTEGLRWVWPWMMRKKISARAHNVHS
HHHHHHHHHHCCEEEECCCCEEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCC
EKVKINDLRGNPIEIACNTVWRVRDTAQAAFDVDDYKEFVNIQIEAGLRTVGARHPYDDM
CEEEEECCCCCEEEEEECCEEEEHHHHHHHCCHHHHHHHEEEEEECCHHHHCCCCCCCCC
SEEDATTLRGSADVVNRELQEELNERLKVAGIVVDEAGLTHLAYAPEIAGAMLRRQQADA
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
VIAARKKVVIGAVGMVEDALAKLSADGVVDLDDERRAAMVSNLMVVLCGDREAHPVVNAG
HHHHHHEEEEEEHHHHHHHHHHHCCCCEEECCCHHHHHHHHCEEEEEECCCCCCCEECCC
TLYQ
CCCC
>Mature Secondary Structure
MVNVLDGMNVSQERGSKTYNGYVMLLVLLAVTVLAFLWMSTSFPPGPEKASKIYFVFKLV
CCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
ASLTGFLVVATGFFMIQPNQTAVITLFGAYSGTERTEGLRWVWPWMMRKKISARAHNVHS
HHHHHHHHHHCCEEEECCCCEEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCC
EKVKINDLRGNPIEIACNTVWRVRDTAQAAFDVDDYKEFVNIQIEAGLRTVGARHPYDDM
CEEEEECCCCCEEEEEECCEEEEHHHHHHHCCHHHHHHHEEEEEECCHHHHCCCCCCCCC
SEEDATTLRGSADVVNRELQEELNERLKVAGIVVDEAGLTHLAYAPEIAGAMLRRQQADA
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
VIAARKKVVIGAVGMVEDALAKLSADGVVDLDDERRAAMVSNLMVVLCGDREAHPVVNAG
HHHHHHEEEEEEHHHHHHHHHHHCCCCEEECCCHHHHHHHHCEEEEEECCCCCCCEECCC
TLYQ
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA