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The map label for this gene is rutD [H]

Identifier: 85375156

GI number: 85375156

Start: 2347399

End: 2348289

Strand: Reverse

Name: rutD [H]

Synonym: ELI_11645

Alternate gene names: 85375156

Gene position: 2348289-2347399 (Counterclockwise)

Preceding gene: 85375157

Following gene: 85375155

Centisome position: 76.93

GC content: 66.11

Gene sequence:

>891_bases
ATGCCAGAGGTCACAGCCAACGGAATCACCATCCACTACGACGATCATGGGCCGAAAGATGCCGAGCCGATCCTGCTGAT
CATGGGTTTCGGCGCGCAGATGACGCTGTGGCCGATGGAGCTGGTCGAAGCGCTCACCGGGCACGGCTTCCGCGTCATCC
GGCACGACAACCGCGACGTCGGCCTCAGCCAAAAATTCGACGGCGTGAAGGCTCCGGGCCTGCTCAAGCTGACGATCCTC
GGCAAGCTCGGCTTCACGCCGAAAGTGCCCTATACCCTTGCCGATATGGCCGACGACAGCGCCGGCGTGCTCGATGCGCT
CGGGATCGGACAGGCGCATGTAGTCGGCGGCAGCATGGGCGGCATGATCGCGCAGCATGTCGCCGCTCGCCATCCGGACA
AGACCAAGACGCTGACCTCGATTTTCTCGACCACCGGCAATCCCAAGCTCCCGCCCGCGAAGAAGGAAGCGATCCAGACC
CTGATCACGCGGCCCAAGTCGCTCGAGGAAGAGGTGCTGGTCGAGCACGGGATCAAGCTGTCCCGGGCGATCGGCAGCCC
CGGCTATCCGGCCGAGGAAGAGCGGCTGCGCGAGCGGGTCCGCGAGGGCGTGAGGCGCAGCGTCTATCCCGAAGGTCCGA
CGCGGCACCTGTCCGCGATTGTCGCCGATGGCGACCGGCGCGAGATGTTGAAGAGCATCACTGCGCCCACGCTCGTGCTG
CACGGCGAGGACGACCCGCTGGTCCCGGTCGAGGGCGGCCGCGACACCGCCGCGCATATACCCGGGGCCAAGATCAAGAC
GATCCCGGGATGGGGCCACGACCTGCCGCTGGAACTGGTCGAAGACTTGGCCGCCGAAATTGCCGCGCACGCGAAGGCCG
GCACAGGATAA

Upstream 100 bases:

>100_bases
CGCGCCGAGGCGGCGACGCTTGTTCGCGCGGCATCTTGCCCCCTGAGACCACATCGGCCATTCAACCTTGCAACACTGCA
TTCGGGGAGAACACGCGGCC

Downstream 100 bases:

>100_bases
TCGGAACCGCTGCAAATTGAATACGTTACTCTTGTATGTCCCGGCCATACCGGCCGTTTCAACTGGGGAGTGACATGAAA
AAGTTTGCAGCAATCGCCGC

Product: hydrolase

Products: NA

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MPEVTANGITIHYDDHGPKDAEPILLIMGFGAQMTLWPMELVEALTGHGFRVIRHDNRDVGLSQKFDGVKAPGLLKLTIL
GKLGFTPKVPYTLADMADDSAGVLDALGIGQAHVVGGSMGGMIAQHVAARHPDKTKTLTSIFSTTGNPKLPPAKKEAIQT
LITRPKSLEEEVLVEHGIKLSRAIGSPGYPAEEERLRERVREGVRRSVYPEGPTRHLSAIVADGDRREMLKSITAPTLVL
HGEDDPLVPVEGGRDTAAHIPGAKIKTIPGWGHDLPLELVEDLAAEIAAHAKAGTG

Sequences:

>Translated_296_residues
MPEVTANGITIHYDDHGPKDAEPILLIMGFGAQMTLWPMELVEALTGHGFRVIRHDNRDVGLSQKFDGVKAPGLLKLTIL
GKLGFTPKVPYTLADMADDSAGVLDALGIGQAHVVGGSMGGMIAQHVAARHPDKTKTLTSIFSTTGNPKLPPAKKEAIQT
LITRPKSLEEEVLVEHGIKLSRAIGSPGYPAEEERLRERVREGVRRSVYPEGPTRHLSAIVADGDRREMLKSITAPTLVL
HGEDDPLVPVEGGRDTAAHIPGAKIKTIPGWGHDLPLELVEDLAAEIAAHAKAGTG
>Mature_295_residues
PEVTANGITIHYDDHGPKDAEPILLIMGFGAQMTLWPMELVEALTGHGFRVIRHDNRDVGLSQKFDGVKAPGLLKLTILG
KLGFTPKVPYTLADMADDSAGVLDALGIGQAHVVGGSMGGMIAQHVAARHPDKTKTLTSIFSTTGNPKLPPAKKEAIQTL
ITRPKSLEEEVLVEHGIKLSRAIGSPGYPAEEERLRERVREGVRRSVYPEGPTRHLSAIVADGDRREMLKSITAPTLVLH
GEDDPLVPVEGGRDTAAHIPGAKIKTIPGWGHDLPLELVEDLAAEIAAHAKAGTG

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 31644; Mature: 31513

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEVTANGITIHYDDHGPKDAEPILLIMGFGAQMTLWPMELVEALTGHGFRVIRHDNRDV
CCCEECCCEEEEECCCCCCCCCCEEEEEECCCCEEECHHHHHHHHHCCCEEEEEECCCCC
GLSQKFDGVKAPGLLKLTILGKLGFTPKVPYTLADMADDSAGVLDALGIGQAHVVGGSMG
CCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHCCCCCCCHHHHHCCCCCEEECCCHH
GMIAQHVAARHPDKTKTLTSIFSTTGNPKLPPAKKEAIQTLITRPKSLEEEVLVEHGIKL
HHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHH
SRAIGSPGYPAEEERLRERVREGVRRSVYPEGPTRHLSAIVADGDRREMLKSITAPTLVL
HHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHEECCCHHHHHHHHHCCCEEEE
HGEDDPLVPVEGGRDTAAHIPGAKIKTIPGWGHDLPLELVEDLAAEIAAHAKAGTG
ECCCCCEEECCCCCCCHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PEVTANGITIHYDDHGPKDAEPILLIMGFGAQMTLWPMELVEALTGHGFRVIRHDNRDV
CCEECCCEEEEECCCCCCCCCCEEEEEECCCCEEECHHHHHHHHHCCCEEEEEECCCCC
GLSQKFDGVKAPGLLKLTILGKLGFTPKVPYTLADMADDSAGVLDALGIGQAHVVGGSMG
CCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHCCCCCCCHHHHHCCCCCEEECCCHH
GMIAQHVAARHPDKTKTLTSIFSTTGNPKLPPAKKEAIQTLITRPKSLEEEVLVEHGIKL
HHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHH
SRAIGSPGYPAEEERLRERVREGVRRSVYPEGPTRHLSAIVADGDRREMLKSITAPTLVL
HHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHEECCCHHHHHHHHHCCCEEEE
HGEDDPLVPVEGGRDTAAHIPGAKIKTIPGWGHDLPLELVEDLAAEIAAHAKAGTG
ECCCCCEEECCCCCCCHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA