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The map label for this gene is 85374426

Identifier: 85374426

GI number: 85374426

Start: 1656457

End: 1656744

Strand: Direct

Name: 85374426

Synonym: ELI_07995

Alternate gene names: NA

Gene position: 1656457-1656744 (Clockwise)

Preceding gene: 85374425

Following gene: 85374427

Centisome position: 54.27

GC content: 52.08

Gene sequence:

>288_bases
TTGAAGGGCGGTTTTGTCTACATCCTCACCAACCGAAAGGATGGAGTTCTTTATCTCGGAGTGACCAACGACCTTGCCAA
TCGGGTGGAGCAGCATCGAACCGGGACGGTCTCAAGCTTTACGAAGAAGTATCAATGTCATCGGCTCGTCTGGTTCGAGC
CATTCGAAAATATTCACGACGCCCGCGAAACCGAAAAACGGATGAAAGCATGGAAACGCGCTTGGAAAATTCGGCTCATC
GAGGAGGCCAATCCGGGTTGGAACGATCTGGCCGACACCCTCGTTTGA

Upstream 100 bases:

>100_bases
CGCCAAGGCCCTCTATATGAGTCCCAGCGCAGGCTGGGACCTCCCTCAATCTGGCGCGAGCCCGATGGAGGCTCCAGCCT
GCGCTGGAGCTCACGGCTAG

Downstream 100 bases:

>100_bases
CAAGCGCCAAGATGAAGGAGGTCCCAGCCCTCGCTGGGACTCACAATCACTATGGGTAACGAAACGCACGACTTCATGCC
CGAAATGGGCGACCAGGGAG

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: Excinuclease ABC C Subunit Domain Protein; Endonuclease; Endo/Excinuclease Amino Terminal Domain-Containing Protein; Excinuclease ABC Subunit C Domain-Containing Protein; Excinuclease ABC C Subunit; Excinuclease ABC C Subunit Domain-Containing Protein; Excinuclease ABC C Subunit-Like Protein; Endonuclease Containing A URI Domain; Endo/Excinuclease Amino Terminal Domain Protein; GIY-YIG Catalytic Domain-Containing Protein; Endonuclease Protein; Crossover Junction Endodeoxyribonuclease RuvC; Excinuclease ABC; Endo/Excinuclease; GIY-YIG Endonuclease Domain-Containing Protein; Excinuclease ABCsubunit C Domain-Containing Protein; Excinuclease ABC C Subunit N-Terminal; GIY-YIG Catalytic Domain Protein

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MKGGFVYILTNRKDGVLYLGVTNDLANRVEQHRTGTVSSFTKKYQCHRLVWFEPFENIHDARETEKRMKAWKRAWKIRLI
EEANPGWNDLADTLV

Sequences:

>Translated_95_residues
MKGGFVYILTNRKDGVLYLGVTNDLANRVEQHRTGTVSSFTKKYQCHRLVWFEPFENIHDARETEKRMKAWKRAWKIRLI
EEANPGWNDLADTLV
>Mature_95_residues
MKGGFVYILTNRKDGVLYLGVTNDLANRVEQHRTGTVSSFTKKYQCHRLVWFEPFENIHDARETEKRMKAWKRAWKIRLI
EEANPGWNDLADTLV

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11210; Mature: 11210

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS50164 UVRC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGGFVYILTNRKDGVLYLGVTNDLANRVEQHRTGTVSSFTKKYQCHRLVWFEPFENIHD
CCCCEEEEEECCCCCEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHEEEEECCHHHHHH
ARETEKRMKAWKRAWKIRLIEEANPGWNDLADTLV
HHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHCC
>Mature Secondary Structure
MKGGFVYILTNRKDGVLYLGVTNDLANRVEQHRTGTVSSFTKKYQCHRLVWFEPFENIHD
CCCCEEEEEECCCCCEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHEEEEECCHHHHHH
ARETEKRMKAWKRAWKIRLIEEANPGWNDLADTLV
HHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA