| Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
|---|---|
| Accession | NC_007722 |
| Length | 3,052,398 |
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The map label for this gene is dcp [H]
Identifier: 85374413
GI number: 85374413
Start: 1641289
End: 1643565
Strand: Direct
Name: dcp [H]
Synonym: ELI_07930
Alternate gene names: 85374413
Gene position: 1641289-1643565 (Clockwise)
Preceding gene: 85374412
Following gene: 85374420
Centisome position: 53.77
GC content: 61.97
Gene sequence:
>2277_bases ATGAAGGCCCAGATCCTGGCCACCACCGCCGCCGCAGCCCTGCTCGCCGGCTGTCAGACATATAACGAGGGAGCCGCCAT GGACCCGATCGCGCAAGCCGAGGCCGATGCGGCTTACAGCCCGGAAATCCCCGAGGGCAGCGGCTATTTCGCGTCCGACA GCAGCCTGCCCTTCCTCGCCCCGGACTTCACCAAAATTTCGGAAGACGACTACATGCCGGCTTTTCAGCAGGGCATGGAC ATCCAGAAGGCCGAAGTGCAGGCGATTATCGACAACCCTGCCGCGCCGACCTTCGAAAACACCATCGTCGCGCTGGAAAA ATCCGGTCGCATGCTCGGCCGCGTCGCGCGCATTTTCTTCGCACTGACCGGTTCCAACACCACCGACCGGCTCGACGAGA TCAACCGCGAAGTCGGGCCGATGCTGTCCGCACACTCGGACTCGATCACGCTCAACCCGGCGCTCTTCGAGCGCGTCAAG GCGGTCTACGATAACCGCGCGGCCATGGCGATGACGGTCGAAGACGCCAAGTTGCTCGAAGAAACCTACAAGCAGATGGT CCACGCGGGCGCATTGCTGACCGAGGCCGAGCGCGAGCGGGTAAAGGCAATCAATACCGAGCTTTCCACGCTGACCACCG AATTCGGTCAGGCCGTCCGTTCGGCCACCAACGACCAGCCGCTGATCGTCGATACGCGCGCCGAACTTGCGGGCCTGTCC GACAGCGATATCGAAGCCGCCGCCAAGCTCGCGGCAGAGAAGGGCCATGACGGCAAGTTCGCCATCGCGCTGCAAAACAC AACGCAGCAGCCCTCGATCCCCAGCCTCGAGAACCGCGACGTGCGCGAGCGGCTGTTCAAGCTGAGCCACAACCGTGCCG ACGGCACCAATCCCGAGCATGACACGCGCATGCTGTTGGCAAAGATCGCCACCCTGCGCGCGGAAAAGGCTGCCCTTTTC GGCGAAGAGGACTGGGCGAGCTACACGATGTACGATCGCATGGCGCAAAAACCCGCGACGGCATTGAAGTTCATGACCGA CATGGTCCCCGCCCTCGCCGCAACACAACGCCGCGAAGCTGCCATGCTCAACGAGCAGATCGCGTCGAAGGGCGGCAATT TCACCGTCGAACCGTGGGACTGGTATCGTTTCGCCAACCAGATCAAGGCCGAGCGTTACGAGCTGGATGAAGATGCGATG ATGGAATATTTCCAGCTCGACAAGGTGCTGGAAGATGGCGTCTTCTTCATGGCCGAGAAGCTCTACGGCCTCACTTTCGA GCGGCGCACGGACCTGCCGGTCTATCACCCCGATGTATGGACCTACACCGTATTCGATGCCGACGGCAGCGAGCTCGGCC TGTTCTATTTTGACCCGTTCCAGCGCCCGTCGAAACGCGGCGGCGCGTGGATGAGCAATTTCGTCGACCAAAGCTATCTG TGGGGCACCAAGCCGGTGATCTACAATGTGCTCAACATCCCGAAGGCGCCCGAAGGCGAAGTGCAGCTGGTCAGCTATGA CTGGGTCAACACGACGTTCCACGAATTCGGCCATGCGCTGCACGGCTTCTTCGCGGACCAGAAATATGAAAGCCTTTCCG GCACGGCGACGGCACGCGATTTCGTCGAGTATCCGAGCCAGGTCCATGAAATGTGGGCGACCTGGCCGTCGGTCCTCCAG AACTATGCCAAGCATTACGAGACCGGCGAGACGATCCCGCAGGCGATGATCGACAAGATCGAAGCCGCATCCAAGTTCAA CCAGGGCTACGACTTCGGCGAAGTCGTCGAAGCGGCGTTGCTCGACATGAAATGGGCCGCGCTATCGCCCGAGGAAGCCG CCGCCATCGACACGCCGGAGAAGGTCTCCGCCTTCGAACGCCGCTCGCTGGAGGAACTGGGGCTCGAGATCGACCTGGTG CCGCCGCGCTATCGCAGCACCTATTTCAACCACATCTTCAGCAGCCCAGCCGGCTATTCGGCCGGCTATTACAGCTATCT GTGGACCGAGATGCTCGACCGCGACAGCCGCAAGTGGTTCCGCGACAATGGCGGGCTGACGCGCGCCAATGGCGATCACT ATCGCAAGACCGTGCTGAGCCGTGGTGGCACAATGGACTATTTTCAGATGTTCGAGAACTTCGCCGGTCGCCAGCCCAAC GTCCAGCCGATGCTGGAAGCGCGTGGCCTGGTCGCGAGCGCCGATGGCGCGGTCGACAGCGAAGCCTCCGACGGTGCCCT GCCGCCACGCACCACTGCGAGCACGCCCGGCGAATAA
Upstream 100 bases:
>100_bases TAATCAATCTCCGGTTCAAGCTCGACCAGCTAAGCAACATTCAACGGCGGCGTCGCTTTCATGCGCGCCGCCAGGTCGTG TTAGAACGAATGGAGAGATT
Downstream 100 bases:
>100_bases CGCGTATCGGACCTAGGCGCGGCGTAGCTTGCTGCGCCACGCCAGCGACTGGCGGTTGAGCGCGGACAGATCCGCCTCAT CCGCCAGCGCCGCCTCTCCC
Product: peptidyl-dipeptidase DCP
Products: NA
Alternate protein names: Dipeptidyl carboxypeptidase [H]
Number of amino acids: Translated: 758; Mature: 758
Protein sequence:
>758_residues MKAQILATTAAAALLAGCQTYNEGAAMDPIAQAEADAAYSPEIPEGSGYFASDSSLPFLAPDFTKISEDDYMPAFQQGMD IQKAEVQAIIDNPAAPTFENTIVALEKSGRMLGRVARIFFALTGSNTTDRLDEINREVGPMLSAHSDSITLNPALFERVK AVYDNRAAMAMTVEDAKLLEETYKQMVHAGALLTEAERERVKAINTELSTLTTEFGQAVRSATNDQPLIVDTRAELAGLS DSDIEAAAKLAAEKGHDGKFAIALQNTTQQPSIPSLENRDVRERLFKLSHNRADGTNPEHDTRMLLAKIATLRAEKAALF GEEDWASYTMYDRMAQKPATALKFMTDMVPALAATQRREAAMLNEQIASKGGNFTVEPWDWYRFANQIKAERYELDEDAM MEYFQLDKVLEDGVFFMAEKLYGLTFERRTDLPVYHPDVWTYTVFDADGSELGLFYFDPFQRPSKRGGAWMSNFVDQSYL WGTKPVIYNVLNIPKAPEGEVQLVSYDWVNTTFHEFGHALHGFFADQKYESLSGTATARDFVEYPSQVHEMWATWPSVLQ NYAKHYETGETIPQAMIDKIEAASKFNQGYDFGEVVEAALLDMKWAALSPEEAAAIDTPEKVSAFERRSLEELGLEIDLV PPRYRSTYFNHIFSSPAGYSAGYYSYLWTEMLDRDSRKWFRDNGGLTRANGDHYRKTVLSRGGTMDYFQMFENFAGRQPN VQPMLEARGLVASADGAVDSEASDGALPPRTTASTPGE
Sequences:
>Translated_758_residues MKAQILATTAAAALLAGCQTYNEGAAMDPIAQAEADAAYSPEIPEGSGYFASDSSLPFLAPDFTKISEDDYMPAFQQGMD IQKAEVQAIIDNPAAPTFENTIVALEKSGRMLGRVARIFFALTGSNTTDRLDEINREVGPMLSAHSDSITLNPALFERVK AVYDNRAAMAMTVEDAKLLEETYKQMVHAGALLTEAERERVKAINTELSTLTTEFGQAVRSATNDQPLIVDTRAELAGLS DSDIEAAAKLAAEKGHDGKFAIALQNTTQQPSIPSLENRDVRERLFKLSHNRADGTNPEHDTRMLLAKIATLRAEKAALF GEEDWASYTMYDRMAQKPATALKFMTDMVPALAATQRREAAMLNEQIASKGGNFTVEPWDWYRFANQIKAERYELDEDAM MEYFQLDKVLEDGVFFMAEKLYGLTFERRTDLPVYHPDVWTYTVFDADGSELGLFYFDPFQRPSKRGGAWMSNFVDQSYL WGTKPVIYNVLNIPKAPEGEVQLVSYDWVNTTFHEFGHALHGFFADQKYESLSGTATARDFVEYPSQVHEMWATWPSVLQ NYAKHYETGETIPQAMIDKIEAASKFNQGYDFGEVVEAALLDMKWAALSPEEAAAIDTPEKVSAFERRSLEELGLEIDLV PPRYRSTYFNHIFSSPAGYSAGYYSYLWTEMLDRDSRKWFRDNGGLTRANGDHYRKTVLSRGGTMDYFQMFENFAGRQPN VQPMLEARGLVASADGAVDSEASDGALPPRTTASTPGE >Mature_758_residues MKAQILATTAAAALLAGCQTYNEGAAMDPIAQAEADAAYSPEIPEGSGYFASDSSLPFLAPDFTKISEDDYMPAFQQGMD IQKAEVQAIIDNPAAPTFENTIVALEKSGRMLGRVARIFFALTGSNTTDRLDEINREVGPMLSAHSDSITLNPALFERVK AVYDNRAAMAMTVEDAKLLEETYKQMVHAGALLTEAERERVKAINTELSTLTTEFGQAVRSATNDQPLIVDTRAELAGLS DSDIEAAAKLAAEKGHDGKFAIALQNTTQQPSIPSLENRDVRERLFKLSHNRADGTNPEHDTRMLLAKIATLRAEKAALF GEEDWASYTMYDRMAQKPATALKFMTDMVPALAATQRREAAMLNEQIASKGGNFTVEPWDWYRFANQIKAERYELDEDAM MEYFQLDKVLEDGVFFMAEKLYGLTFERRTDLPVYHPDVWTYTVFDADGSELGLFYFDPFQRPSKRGGAWMSNFVDQSYL WGTKPVIYNVLNIPKAPEGEVQLVSYDWVNTTFHEFGHALHGFFADQKYESLSGTATARDFVEYPSQVHEMWATWPSVLQ NYAKHYETGETIPQAMIDKIEAASKFNQGYDFGEVVEAALLDMKWAALSPEEAAAIDTPEKVSAFERRSLEELGLEIDLV PPRYRSTYFNHIFSSPAGYSAGYYSYLWTEMLDRDSRKWFRDNGGLTRANGDHYRKTVLSRGGTMDYFQMFENFAGRQPN VQPMLEARGLVASADGAVDSEASDGALPPRTTASTPGE
Specific function: Removes dipeptides from the C-termini of N-blocked tripeptides, tetrapeptides and larger peptides [H]
COG id: COG0339
COG function: function code E; Zn-dependent oligopeptidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M3 family [H]
Homologues:
Organism=Homo sapiens, GI4507491, Length=614, Percent_Identity=26.5472312703583, Blast_Score=199, Evalue=8e-51, Organism=Homo sapiens, GI14149738, Length=609, Percent_Identity=26.9293924466338, Blast_Score=183, Evalue=6e-46, Organism=Homo sapiens, GI156105687, Length=443, Percent_Identity=25.9593679458239, Blast_Score=143, Evalue=8e-34, Organism=Escherichia coli, GI1787819, Length=681, Percent_Identity=44.4933920704846, Blast_Score=596, Evalue=1e-171, Organism=Escherichia coli, GI1789913, Length=685, Percent_Identity=29.1970802919708, Blast_Score=294, Evalue=1e-80, Organism=Caenorhabditis elegans, GI32565901, Length=461, Percent_Identity=22.7765726681128, Blast_Score=70, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6319793, Length=635, Percent_Identity=26.9291338582677, Blast_Score=188, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6322715, Length=682, Percent_Identity=21.5542521994135, Blast_Score=108, Evalue=4e-24, Organism=Drosophila melanogaster, GI21356111, Length=552, Percent_Identity=23.3695652173913, Blast_Score=122, Evalue=8e-28, Organism=Drosophila melanogaster, GI20129717, Length=437, Percent_Identity=25.1716247139588, Blast_Score=121, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001567 [H]
Pfam domain/function: PF01432 Peptidase_M3 [H]
EC number: =3.4.15.5 [H]
Molecular weight: Translated: 84562; Mature: 84562
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAQILATTAAAALLAGCQTYNEGAAMDPIAQAEADAAYSPEIPEGSGYFASDSSLPFLA CCCEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC PDFTKISEDDYMPAFQQGMDIQKAEVQAIIDNPAAPTFENTIVALEKSGRMLGRVARIFF CCCCCCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHH ALTGSNTTDRLDEINREVGPMLSAHSDSITLNPALFERVKAVYDNRAAMAMTVEDAKLLE HCCCCCCHHHHHHHHHHHCCHHHCCCCCEEECHHHHHHHHHHHCCCCEEEEEHHHHHHHH ETYKQMVHAGALLTEAERERVKAINTELSTLTTEFGQAVRSATNDQPLIVDTRAELAGLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHCCCC DSDIEAAAKLAAEKGHDGKFAIALQNTTQQPSIPSLENRDVRERLFKLSHNRADGTNPEH CCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCH DTRMLLAKIATLRAEKAALFGEEDWASYTMYDRMAQKPATALKFMTDMVPALAATQRREA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH AMLNEQIASKGGNFTVEPWDWYRFANQIKAERYELDEDAMMEYFQLDKVLEDGVFFMAEK HHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LYGLTFERRTDLPVYHPDVWTYTVFDADGSELGLFYFDPFQRPSKRGGAWMSNFVDQSYL HHCCEECCCCCCCEECCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHC WGTKPVIYNVLNIPKAPEGEVQLVSYDWVNTTFHEFGHALHGFFADQKYESLSGTATARD CCCCHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH FVEYPSQVHEMWATWPSVLQNYAKHYETGETIPQAMIDKIEAASKFNQGYDFGEVVEAAL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LDMKWAALSPEEAAAIDTPEKVSAFERRSLEELGLEIDLVPPRYRSTYFNHIFSSPAGYS HHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCCCC AGYYSYLWTEMLDRDSRKWFRDNGGLTRANGDHYRKTVLSRGGTMDYFQMFENFAGRQPN CHHHHHHHHHHHCCHHHHHHHCCCCEECCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCC VQPMLEARGLVASADGAVDSEASDGALPPRTTASTPGE CCHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKAQILATTAAAALLAGCQTYNEGAAMDPIAQAEADAAYSPEIPEGSGYFASDSSLPFLA CCCEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC PDFTKISEDDYMPAFQQGMDIQKAEVQAIIDNPAAPTFENTIVALEKSGRMLGRVARIFF CCCCCCCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHH ALTGSNTTDRLDEINREVGPMLSAHSDSITLNPALFERVKAVYDNRAAMAMTVEDAKLLE HCCCCCCHHHHHHHHHHHCCHHHCCCCCEEECHHHHHHHHHHHCCCCEEEEEHHHHHHHH ETYKQMVHAGALLTEAERERVKAINTELSTLTTEFGQAVRSATNDQPLIVDTRAELAGLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHCCCC DSDIEAAAKLAAEKGHDGKFAIALQNTTQQPSIPSLENRDVRERLFKLSHNRADGTNPEH CCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCH DTRMLLAKIATLRAEKAALFGEEDWASYTMYDRMAQKPATALKFMTDMVPALAATQRREA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH AMLNEQIASKGGNFTVEPWDWYRFANQIKAERYELDEDAMMEYFQLDKVLEDGVFFMAEK HHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LYGLTFERRTDLPVYHPDVWTYTVFDADGSELGLFYFDPFQRPSKRGGAWMSNFVDQSYL HHCCEECCCCCCCEECCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHC WGTKPVIYNVLNIPKAPEGEVQLVSYDWVNTTFHEFGHALHGFFADQKYESLSGTATARD CCCCHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH FVEYPSQVHEMWATWPSVLQNYAKHYETGETIPQAMIDKIEAASKFNQGYDFGEVVEAAL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH LDMKWAALSPEEAAAIDTPEKVSAFERRSLEELGLEIDLVPPRYRSTYFNHIFSSPAGYS HHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCCCC AGYYSYLWTEMLDRDSRKWFRDNGGLTRANGDHYRKTVLSRGGTMDYFQMFENFAGRQPN CHHHHHHHHHHHCCHHHHHHHCCCCEECCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCC VQPMLEARGLVASADGAVDSEASDGALPPRTTASTPGE CCHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226676; 9097039; 9278503 [H]