Click here to switch to the map view.

The map label for this gene is yhdG [H]

Identifier: 85374389

GI number: 85374389

Start: 1617825

End: 1619069

Strand: Reverse

Name: yhdG [H]

Synonym: ELI_07810

Alternate gene names: 85374389

Gene position: 1619069-1617825 (Counterclockwise)

Preceding gene: 85374394

Following gene: 85374387

Centisome position: 53.04

GC content: 62.65

Gene sequence:

>1245_bases
ATGTCGCTCAAGCGCTCGATGGGGCTTTCCAATCTGATATTCTATGGCACCGGTACGATCCTCGGCGCCGGAATATTCGT
CGTTATCGGGGAGGTCATGGGCAAGGCAGGCCCCCTGGCACCGCTTGCCTATGCCGCGGCCGGCCTGGTCGCCGTTTTCA
CTGCATTATCCTTTGCCGAGATCGCGGCTCGCGTTCCCACGGCTGGAGGGGCGATCGATTACGTCGAGAAGGCATTCGGC
ACGACATGGAAATTGCCGACGACCGCTGGCTGGATGCTGATCGTTGCCAACATCGTTTCCGGAGCGACGATCACGACCGG
CTTTGTCAGCTATCTCGACAGCTTCGTAAACGTTCCGGGCTGGATGGCGACGAGCGGGCTGGTCGTCCTGCTGGGCGTGA
TTTCCATCGCCGGCATGAAGCAAAGCGCTTGGTTCATGACGCTGACGACCGGGGTCGGCATCGTGACCCTGCTTGTCATC
CTGTGGCTCACCCGTGACAGTCTGATGGCGTGGCCCGGCGATTTTGCTGCCAGCCTCGGCGAGGAGGGGGGCGGGATCGG
CAACGCCGGGGCCCTAAGCGCGATATTCGCCGGCGCTTTCCTCGCCATCTATTCCTTCATCGGTTTCGGCGATGTCGCGC
AGACCGCGGAGGAGGTAGAGGATGTGAAAAAGACCTTGCCGCGCGCCATGTGGATCGTGCTCATTATCGTCTTCCTGTTC
TACCTCGCCGTGTCTGCGGCATTGGGTGGTCGCGATGATATCGACCGCATCGCCGGTGCCGACGCGCCGCTGGTCTATGC
GGCGACCCGGGACAGCGGCTTTCCTGCGCTGCCGCTCGCCATTGCCAGCCTGTTCGTGATCGTCAACGGCGCGCTCACCC
AGGTCATCGCCGCCAGCCGGCTGCTGATGGATATGGGCCGCGACGCGCGGTCGGGGACGCCCGAGTGGCTGGGCCGGACG
AACGAGACCACCAACACACCGATAATCGCGACGCTGGTGACGCTTGCGGTGGTTCTGGTGCTGGCATTGTTCGTGCCGCT
GGGGACCCTGGCGAGCGGTACGAGCCTGGCGATCCTGCTGGTATTCATCACGGTCAATGCGGCGTTGTGGAAGCTCAAGC
GGCAGGACCAGCCGGATGATGTGCCGAATATGTGGATGATAGTGCCAATTCTGGGGACCGTGTTCTGCACCCTCACGGTG
ATCGGCCAGATCGTGCTGTGGACCACCGGTATCGGGAGCGGTTGA

Upstream 100 bases:

>100_bases
GTCAACCGGTTGGCGAAGGCGACGCCCCTTTGCGCTTGTTTTCCCGGAACGAGTCCGGTGCTGAATCCATTGATCTCGCA
ACGCAGGCAGGGGAAACGCG

Downstream 100 bases:

>100_bases
CGGCGCTTCAGCGGCGGAGGCGCTTTTCAATGTCGTGGACCAGGCGGTCGGAAACCCGCCCCAGTCCTGCCAGTTCCTCC
AGCTCCGCATCGGGGGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MSLKRSMGLSNLIFYGTGTILGAGIFVVIGEVMGKAGPLAPLAYAAAGLVAVFTALSFAEIAARVPTAGGAIDYVEKAFG
TTWKLPTTAGWMLIVANIVSGATITTGFVSYLDSFVNVPGWMATSGLVVLLGVISIAGMKQSAWFMTLTTGVGIVTLLVI
LWLTRDSLMAWPGDFAASLGEEGGGIGNAGALSAIFAGAFLAIYSFIGFGDVAQTAEEVEDVKKTLPRAMWIVLIIVFLF
YLAVSAALGGRDDIDRIAGADAPLVYAATRDSGFPALPLAIASLFVIVNGALTQVIAASRLLMDMGRDARSGTPEWLGRT
NETTNTPIIATLVTLAVVLVLALFVPLGTLASGTSLAILLVFITVNAALWKLKRQDQPDDVPNMWMIVPILGTVFCTLTV
IGQIVLWTTGIGSG

Sequences:

>Translated_414_residues
MSLKRSMGLSNLIFYGTGTILGAGIFVVIGEVMGKAGPLAPLAYAAAGLVAVFTALSFAEIAARVPTAGGAIDYVEKAFG
TTWKLPTTAGWMLIVANIVSGATITTGFVSYLDSFVNVPGWMATSGLVVLLGVISIAGMKQSAWFMTLTTGVGIVTLLVI
LWLTRDSLMAWPGDFAASLGEEGGGIGNAGALSAIFAGAFLAIYSFIGFGDVAQTAEEVEDVKKTLPRAMWIVLIIVFLF
YLAVSAALGGRDDIDRIAGADAPLVYAATRDSGFPALPLAIASLFVIVNGALTQVIAASRLLMDMGRDARSGTPEWLGRT
NETTNTPIIATLVTLAVVLVLALFVPLGTLASGTSLAILLVFITVNAALWKLKRQDQPDDVPNMWMIVPILGTVFCTLTV
IGQIVLWTTGIGSG
>Mature_413_residues
SLKRSMGLSNLIFYGTGTILGAGIFVVIGEVMGKAGPLAPLAYAAAGLVAVFTALSFAEIAARVPTAGGAIDYVEKAFGT
TWKLPTTAGWMLIVANIVSGATITTGFVSYLDSFVNVPGWMATSGLVVLLGVISIAGMKQSAWFMTLTTGVGIVTLLVIL
WLTRDSLMAWPGDFAASLGEEGGGIGNAGALSAIFAGAFLAIYSFIGFGDVAQTAEEVEDVKKTLPRAMWIVLIIVFLFY
LAVSAALGGRDDIDRIAGADAPLVYAATRDSGFPALPLAIASLFVIVNGALTQVIAASRLLMDMGRDARSGTPEWLGRTN
ETTNTPIIATLVTLAVVLVLALFVPLGTLASGTSLAILLVFITVNAALWKLKRQDQPDDVPNMWMIVPILGTVFCTLTVI
GQIVLWTTGIGSG

Specific function: Probable Amino-Acid Or Metabolite Transport Protein. [C]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Homo sapiens, GI258614005, Length=425, Percent_Identity=27.5294117647059, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI258614003, Length=425, Percent_Identity=27.5294117647059, Blast_Score=113, Evalue=4e-25,
Organism=Homo sapiens, GI4507047, Length=423, Percent_Identity=28.1323877068558, Blast_Score=108, Evalue=9e-24,
Organism=Homo sapiens, GI114326544, Length=414, Percent_Identity=28.2608695652174, Blast_Score=106, Evalue=5e-23,
Organism=Homo sapiens, GI114326550, Length=414, Percent_Identity=28.2608695652174, Blast_Score=106, Evalue=5e-23,
Organism=Homo sapiens, GI258645169, Length=425, Percent_Identity=26.5882352941176, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI110347453, Length=270, Percent_Identity=27.7777777777778, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI181337167, Length=394, Percent_Identity=25.8883248730964, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI115648063, Length=428, Percent_Identity=24.7663551401869, Blast_Score=66, Evalue=8e-11,
Organism=Homo sapiens, GI115648022, Length=428, Percent_Identity=24.7663551401869, Blast_Score=66, Evalue=8e-11,
Organism=Escherichia coli, GI87082023, Length=401, Percent_Identity=22.4438902743142, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI87082250, Length=406, Percent_Identity=24.384236453202, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI87081869, Length=398, Percent_Identity=24.1206030150754, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786694, Length=419, Percent_Identity=21.9570405727924, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788480, Length=257, Percent_Identity=26.8482490272374, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1786302, Length=392, Percent_Identity=22.1938775510204, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1790653, Length=248, Percent_Identity=26.6129032258064, Blast_Score=62, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17532491, Length=423, Percent_Identity=25.7683215130024, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17531343, Length=405, Percent_Identity=24.6913580246914, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17533459, Length=408, Percent_Identity=24.0196078431373, Blast_Score=98, Evalue=8e-21,
Organism=Drosophila melanogaster, GI24668806, Length=402, Percent_Identity=27.363184079602, Blast_Score=122, Evalue=3e-28,
Organism=Drosophila melanogaster, GI21356285, Length=402, Percent_Identity=27.363184079602, Blast_Score=122, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24668802, Length=402, Percent_Identity=27.363184079602, Blast_Score=122, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24667468, Length=395, Percent_Identity=27.0886075949367, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI221512776, Length=387, Percent_Identity=27.6485788113695, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24666159, Length=387, Percent_Identity=27.6485788113695, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI221331183, Length=425, Percent_Identity=24.4705882352941, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI17647653, Length=425, Percent_Identity=24.4705882352941, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24664379, Length=425, Percent_Identity=24.4705882352941, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI281366235, Length=417, Percent_Identity=26.378896882494, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI116007820, Length=417, Percent_Identity=26.378896882494, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI116007818, Length=409, Percent_Identity=26.4058679706601, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI85725152, Length=409, Percent_Identity=26.4058679706601, Blast_Score=69, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR004758
- InterPro:   IPR015606 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 43144; Mature: 43013

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKRSMGLSNLIFYGTGTILGAGIFVVIGEVMGKAGPLAPLAYAAAGLVAVFTALSFAE
CCCCHHCCCCHHHEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
IAARVPTAGGAIDYVEKAFGTTWKLPTTAGWMLIVANIVSGATITTGFVSYLDSFVNVPG
HHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
WMATSGLVVLLGVISIAGMKQSAWFMTLTTGVGIVTLLVILWLTRDSLMAWPGDFAASLG
HHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHC
EEGGGIGNAGALSAIFAGAFLAIYSFIGFGDVAQTAEEVEDVKKTLPRAMWIVLIIVFLF
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLAVSAALGGRDDIDRIAGADAPLVYAATRDSGFPALPLAIASLFVIVNGALTQVIAASR
HHHHHHHCCCCCHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLMDMGRDARSGTPEWLGRTNETTNTPIIATLVTLAVVLVLALFVPLGTLASGTSLAILL
HHHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VFITVNAALWKLKRQDQPDDVPNMWMIVPILGTVFCTLTVIGQIVLWTTGIGSG
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SLKRSMGLSNLIFYGTGTILGAGIFVVIGEVMGKAGPLAPLAYAAAGLVAVFTALSFAE
CCCHHCCCCHHHEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
IAARVPTAGGAIDYVEKAFGTTWKLPTTAGWMLIVANIVSGATITTGFVSYLDSFVNVPG
HHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
WMATSGLVVLLGVISIAGMKQSAWFMTLTTGVGIVTLLVILWLTRDSLMAWPGDFAASLG
HHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHC
EEGGGIGNAGALSAIFAGAFLAIYSFIGFGDVAQTAEEVEDVKKTLPRAMWIVLIIVFLF
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLAVSAALGGRDDIDRIAGADAPLVYAATRDSGFPALPLAIASLFVIVNGALTQVIAASR
HHHHHHHCCCCCHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLMDMGRDARSGTPEWLGRTNETTNTPIIATLVTLAVVLVLALFVPLGTLASGTSLAILL
HHHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VFITVNAALWKLKRQDQPDDVPNMWMIVPILGTVFCTLTVIGQIVLWTTGIGSG
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]