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The map label for this gene is 85374194

Identifier: 85374194

GI number: 85374194

Start: 1416852

End: 1417739

Strand: Reverse

Name: 85374194

Synonym: ELI_06835

Alternate gene names: NA

Gene position: 1417739-1416852 (Counterclockwise)

Preceding gene: 85374195

Following gene: 85374193

Centisome position: 46.45

GC content: 62.73

Gene sequence:

>888_bases
ATGCAATCGCCGCACAGTACTGACGGAACGATCATCAACGGCCTCTCGGTCGATGTCGAGGACTGGTTCCAGGTCGGTGC
CTTCGAAAATGTAATCGACCGGGGAGACTGGGACGGTCTGGCGCTGCGCGTCGAGGACAATGTACTGCGTATCCTCGACC
TGTTCGATGCCGCCGAAGTGAAGGCGACCTTCTTCACCCTCGGATGGATCGCCAAGCGCAATCCCGCCATCATCCGCCGG
ATCGTCGACCGCGGGCACGAACTGGCGAGCCACGGCTATGATCATGGCCGCGTATTCGCTTTCGATCGCAAGCAATTCGC
GGGCGATATCAAGCTGGCACGGATGATCCTCGAGGATGCGGGCGGCGTGCAGGTGACCGGCTATCGCGCGCCCAGCTTCT
CGATCGATAAGCGCACGCCCTGGGCCTACATGGAACTGGCCGAGCAAGGCTATGCCTATTCTTCCAGCGTCGCCCCGGTA
GTGCACGATCATTACGGCTGGCGCGAGGCACCGCGCTTCGCGTTCAAGCCGCTGCCATGGTCGGACCTCGTCGAAATTCC
GGTCACCACGGCGATCCTCGGCGGCAGGCGCGTAGCGGCAGGCGGCGGCGGCTTTTTCCGCGTGCTGCCCTATGCCTTCA
GCCGCTGGGCGATCCGACAGGTTAATCGCCAGGACTGCCGCCCTGCGGTGTTCTATTTCCATCCGTGGGAGATCGATCCG
GAACAGCCGCGCGTCGGCAATGCTCCGATCAAATCGAAGCTGCGCCACTACACCAATCTCGACAAGATGGCTGAAAAGCT
GCGCGAGCTGGTGCACGAGTTCGAGTGGGGCCGGATGGACATTTTGGCCCATCGCGAAGCCGCGCGCGCGGTGGAGCTGG
CTGCGTGA

Upstream 100 bases:

>100_bases
ACGAGCAGGAAGCGAGCGTTCGTCAGGTCCTGACCATGGTGATCGAGTGGATCGAAGGCGAGAAGCGCCAGGCAGCCTGA
GCGAAGGGGGGCAAGGCGTC

Downstream 100 bases:

>100_bases
ATGCCCCCTTTGCCCTCTGCGAAGAGACGGTTGCGCAGGTGAACCTGCACGATCCGGCCGAATGCGCGCGGATTGCCGAT
TTCGTCTATCGCGCCAACGG

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Family Protein; Polysaccharide Deacetylase Domain-Containing Protein; PEP-CTERM Locus Polysaccharide Deactylase; Polysaccharide Deactylase Domain-Containing Protein; Polysaccharide Deacetylase N-Terminal Fragment; Polysaccharide Deacetylase Domain Protein; Polysaccharide Deacetylase Pda4C; Chitooligosaccharide Deacetylase

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MQSPHSTDGTIINGLSVDVEDWFQVGAFENVIDRGDWDGLALRVEDNVLRILDLFDAAEVKATFFTLGWIAKRNPAIIRR
IVDRGHELASHGYDHGRVFAFDRKQFAGDIKLARMILEDAGGVQVTGYRAPSFSIDKRTPWAYMELAEQGYAYSSSVAPV
VHDHYGWREAPRFAFKPLPWSDLVEIPVTTAILGGRRVAAGGGGFFRVLPYAFSRWAIRQVNRQDCRPAVFYFHPWEIDP
EQPRVGNAPIKSKLRHYTNLDKMAEKLRELVHEFEWGRMDILAHREAARAVELAA

Sequences:

>Translated_295_residues
MQSPHSTDGTIINGLSVDVEDWFQVGAFENVIDRGDWDGLALRVEDNVLRILDLFDAAEVKATFFTLGWIAKRNPAIIRR
IVDRGHELASHGYDHGRVFAFDRKQFAGDIKLARMILEDAGGVQVTGYRAPSFSIDKRTPWAYMELAEQGYAYSSSVAPV
VHDHYGWREAPRFAFKPLPWSDLVEIPVTTAILGGRRVAAGGGGFFRVLPYAFSRWAIRQVNRQDCRPAVFYFHPWEIDP
EQPRVGNAPIKSKLRHYTNLDKMAEKLRELVHEFEWGRMDILAHREAARAVELAA
>Mature_295_residues
MQSPHSTDGTIINGLSVDVEDWFQVGAFENVIDRGDWDGLALRVEDNVLRILDLFDAAEVKATFFTLGWIAKRNPAIIRR
IVDRGHELASHGYDHGRVFAFDRKQFAGDIKLARMILEDAGGVQVTGYRAPSFSIDKRTPWAYMELAEQGYAYSSSVAPV
VHDHYGWREAPRFAFKPLPWSDLVEIPVTTAILGGRRVAAGGGGFFRVLPYAFSRWAIRQVNRQDCRPAVFYFHPWEIDP
EQPRVGNAPIKSKLRHYTNLDKMAEKLRELVHEFEWGRMDILAHREAARAVELAA

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33508; Mature: 33508

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSPHSTDGTIINGLSVDVEDWFQVGAFENVIDRGDWDGLALRVEDNVLRILDLFDAAEV
CCCCCCCCCCEEECEEECHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
KATFFTLGWIAKRNPAIIRRIVDRGHELASHGYDHGRVFAFDRKQFAGDIKLARMILEDA
HHHHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHCC
GGVQVTGYRAPSFSIDKRTPWAYMELAEQGYAYSSSVAPVVHDHYGWREAPRFAFKPLPW
CCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCH
SDLVEIPVTTAILGGRRVAAGGGGFFRVLPYAFSRWAIRQVNRQDCRPAVFYFHPWEIDP
HHHHHCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHCCCCEEEEEECCCCCC
EQPRVGNAPIKSKLRHYTNLDKMAEKLRELVHEFEWGRMDILAHREAARAVELAA
CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQSPHSTDGTIINGLSVDVEDWFQVGAFENVIDRGDWDGLALRVEDNVLRILDLFDAAEV
CCCCCCCCCCEEECEEECHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
KATFFTLGWIAKRNPAIIRRIVDRGHELASHGYDHGRVFAFDRKQFAGDIKLARMILEDA
HHHHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHCC
GGVQVTGYRAPSFSIDKRTPWAYMELAEQGYAYSSSVAPVVHDHYGWREAPRFAFKPLPW
CCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCH
SDLVEIPVTTAILGGRRVAAGGGGFFRVLPYAFSRWAIRQVNRQDCRPAVFYFHPWEIDP
HHHHHCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHCCCCEEEEEECCCCCC
EQPRVGNAPIKSKLRHYTNLDKMAEKLRELVHEFEWGRMDILAHREAARAVELAA
CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA