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The map label for this gene is 85373888

Identifier: 85373888

GI number: 85373888

Start: 1096130

End: 1097509

Strand: Direct

Name: 85373888

Synonym: ELI_05305

Alternate gene names: NA

Gene position: 1096130-1097509 (Clockwise)

Preceding gene: 85373884

Following gene: 85373889

Centisome position: 35.91

GC content: 61.38

Gene sequence:

>1380_bases
ATGGCTGAATCATCGATTTTCGCGGGCGCCGCGTTGCGCCGATTGCGCAAGCGCGAAGGCGTAACTCAAGCCGAAATGGC
GCAGCGCCTCGGCATTTCGGCCAGCTATCTCACTCTGATGGAACGCAATCAGCGCCCGGTTTCCGCCCGCGTGATCGTAC
AATTGGTAGAACAATACGATTTCGATCCGCGCCAGTTGCGCGAAGACGAGTCGATCGGCGGGCTTGACGGGTTGTACCGA
CGGCTGCGGGACGAGCGCTTTGCCGATCTGGACATCGATCGCGATGAGGCCGAGGAATTTCTGTCCAATGCTCCCCAGGC
CGCCGCCGCCTTTGCGCGCCTGTTCGACAGCGGTGGAGGAAGTGGATCATCTGCCGAAAATCCAATGTCGGAATCGCGCC
GAGAAATCGAGCGTTGGCGCAATTATTTCGGGGATCTCGACGTCGCTGCCGAGGAATTGGCGGACGAGTTGCGCCTGTCA
CGCGCCGATTTCTATACCGCTGTGACCGAGCGTCTGCGGGAGAAGCATCACCTCGCCATTCGCATCCTGCCACGCGATGT
CATGCCCGGGTCTATCAGGCGCCTGGATTTTCACGCAAGGCAAGTCCAGCTCAGCGAAATGCTTTTGCCGCCATCGCGCA
ATTTCCAGCTGGCGCTTCAGCTTGCCGAGCTGGAATATGGCTCCGCGGTAAAGGCAATCGCCGAAGGCTCGACCTTCAGC
GACCCGGCCGGGCGCAAGCTGTTCGAACGCCACCTCGCGGGCTATTTCGCAGCTGCTCTCATGATGCCCTACGGCCGCTT
CCTCCGGGCCTGCGAATCCACCGGCTATGACCTCACGGTACTCCCGCGCCGCTTCGGTGCCAGCATCGAACAGGTCTCCC
ACCGCCTGACGACGCTCCAGCGTGTCGGTCAGAGAGGATTGCCCTTCTTCATGGCCAGGATCGACAGGGCAGGTCAGTTC
TCCAAGCGCTTCGTCGGCGAGAGCGGTGCGACCCTGATTGACCAGCCGCATTCCTGTCCGCGCTGGAACGTCAATCGCGC
GATCGAGCGGCCTGATGATTGGCTCGTGCAGGCCGTATTGCTGGAAGAGGGGCGTGGCGGTCCGACCCATTGGCTAACCA
TGAGCCATGCGGCGACATCATCGACCGGGGAGGCGGATGCCCGCTTTGCCATTGTCGTCGGTCTCGAAGCGAAATTTGCC
AGCGATTTGGCGCAGGCGAAGGGGGTGTCGCTCAATCCTGAGTCCGCGACGAAGGTTGGGCTGGGTTGCACCACCTGCAC
CTGGGTCGATTGCCGTCAGCGTTCGCTGCCGCCTCGTGGTGCCTCGCTACAGTTCGAATTGATCACGCGCGCCAATACGC
CTTTCCAATTCGATAGCTGA

Upstream 100 bases:

>100_bases
GCATCCAATTTGCTAAAGTGATAGAAATTCTTACAGGAAATCTTGTTTATCGAGCGGCCGTATGGCAGTTGGACGTGTCA
AGATGTAAGGATCGATACAA

Downstream 100 bases:

>100_bases
GCCGGGAACCGAAGGATCGCCCCGGCATTTGCGCTTGAGGAGGAAATCCCATGACTGAAGAACGCGTTACCACGACAGAG
AACCCGGACGGTTCGATCAC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MAESSIFAGAALRRLRKREGVTQAEMAQRLGISASYLTLMERNQRPVSARVIVQLVEQYDFDPRQLREDESIGGLDGLYR
RLRDERFADLDIDRDEAEEFLSNAPQAAAAFARLFDSGGGSGSSAENPMSESRREIERWRNYFGDLDVAAEELADELRLS
RADFYTAVTERLREKHHLAIRILPRDVMPGSIRRLDFHARQVQLSEMLLPPSRNFQLALQLAELEYGSAVKAIAEGSTFS
DPAGRKLFERHLAGYFAAALMMPYGRFLRACESTGYDLTVLPRRFGASIEQVSHRLTTLQRVGQRGLPFFMARIDRAGQF
SKRFVGESGATLIDQPHSCPRWNVNRAIERPDDWLVQAVLLEEGRGGPTHWLTMSHAATSSTGEADARFAIVVGLEAKFA
SDLAQAKGVSLNPESATKVGLGCTTCTWVDCRQRSLPPRGASLQFELITRANTPFQFDS

Sequences:

>Translated_459_residues
MAESSIFAGAALRRLRKREGVTQAEMAQRLGISASYLTLMERNQRPVSARVIVQLVEQYDFDPRQLREDESIGGLDGLYR
RLRDERFADLDIDRDEAEEFLSNAPQAAAAFARLFDSGGGSGSSAENPMSESRREIERWRNYFGDLDVAAEELADELRLS
RADFYTAVTERLREKHHLAIRILPRDVMPGSIRRLDFHARQVQLSEMLLPPSRNFQLALQLAELEYGSAVKAIAEGSTFS
DPAGRKLFERHLAGYFAAALMMPYGRFLRACESTGYDLTVLPRRFGASIEQVSHRLTTLQRVGQRGLPFFMARIDRAGQF
SKRFVGESGATLIDQPHSCPRWNVNRAIERPDDWLVQAVLLEEGRGGPTHWLTMSHAATSSTGEADARFAIVVGLEAKFA
SDLAQAKGVSLNPESATKVGLGCTTCTWVDCRQRSLPPRGASLQFELITRANTPFQFDS
>Mature_458_residues
AESSIFAGAALRRLRKREGVTQAEMAQRLGISASYLTLMERNQRPVSARVIVQLVEQYDFDPRQLREDESIGGLDGLYRR
LRDERFADLDIDRDEAEEFLSNAPQAAAAFARLFDSGGGSGSSAENPMSESRREIERWRNYFGDLDVAAEELADELRLSR
ADFYTAVTERLREKHHLAIRILPRDVMPGSIRRLDFHARQVQLSEMLLPPSRNFQLALQLAELEYGSAVKAIAEGSTFSD
PAGRKLFERHLAGYFAAALMMPYGRFLRACESTGYDLTVLPRRFGASIEQVSHRLTTLQRVGQRGLPFFMARIDRAGQFS
KRFVGESGATLIDQPHSCPRWNVNRAIERPDDWLVQAVLLEEGRGGPTHWLTMSHAATSSTGEADARFAIVVGLEAKFAS
DLAQAKGVSLNPESATKVGLGCTTCTWVDCRQRSLPPRGASLQFELITRANTPFQFDS

Specific function: Unknown

COG id: COG3800

COG function: function code R; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018653
- InterPro:   IPR010359
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF09856 DUF2083; PF06114 DUF955; PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 51294; Mature: 51162

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS50943 HTH_CROC1 ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAESSIFAGAALRRLRKREGVTQAEMAQRLGISASYLTLMERNQRPVSARVIVQLVEQYD
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHCC
FDPRQLREDESIGGLDGLYRRLRDERFADLDIDRDEAEEFLSNAPQAAAAFARLFDSGGG
CCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCC
SGSSAENPMSESRREIERWRNYFGDLDVAAEELADELRLSRADFYTAVTERLREKHHLAI
CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
RILPRDVMPGSIRRLDFHARQVQLSEMLLPPSRNFQLALQLAELEYGSAVKAIAEGSTFS
EEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCCCHHHHHHHCCCCCC
DPAGRKLFERHLAGYFAAALMMPYGRFLRACESTGYDLTVLPRRFGASIEQVSHRLTTLQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHCCCHHHHHHHHHHHH
RVGQRGLPFFMARIDRAGQFSKRFVGESGATLIDQPHSCPRWNVNRAIERPDDWLVQAVL
HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHCCCCHHHHHHHHH
LEEGRGGPTHWLTMSHAATSSTGEADARFAIVVGLEAKFASDLAQAKGVSLNPESATKVG
HHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCCCEEC
LGCTTCTWVDCRQRSLPPRGASLQFELITRANTPFQFDS
CCCCEEEEHHHHHHCCCCCCCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
AESSIFAGAALRRLRKREGVTQAEMAQRLGISASYLTLMERNQRPVSARVIVQLVEQYD
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHCC
FDPRQLREDESIGGLDGLYRRLRDERFADLDIDRDEAEEFLSNAPQAAAAFARLFDSGGG
CCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCC
SGSSAENPMSESRREIERWRNYFGDLDVAAEELADELRLSRADFYTAVTERLREKHHLAI
CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
RILPRDVMPGSIRRLDFHARQVQLSEMLLPPSRNFQLALQLAELEYGSAVKAIAEGSTFS
EEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHCCCHHHHHHHCCCCCC
DPAGRKLFERHLAGYFAAALMMPYGRFLRACESTGYDLTVLPRRFGASIEQVSHRLTTLQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHCCCHHHHHHHHHHHH
RVGQRGLPFFMARIDRAGQFSKRFVGESGATLIDQPHSCPRWNVNRAIERPDDWLVQAVL
HHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHCCCCHHHHHHHHH
LEEGRGGPTHWLTMSHAATSSTGEADARFAIVVGLEAKFASDLAQAKGVSLNPESATKVG
HHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCCCEEC
LGCTTCTWVDCRQRSLPPRGASLQFELITRANTPFQFDS
CCCCEEEEHHHHHHCCCCCCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]