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The map label for this gene is traC [H]

Identifier: 85373694

GI number: 85373694

Start: 896833

End: 899382

Strand: Reverse

Name: traC [H]

Synonym: ELI_04335

Alternate gene names: 85373694

Gene position: 899382-896833 (Counterclockwise)

Preceding gene: 85373695

Following gene: 85373693

Centisome position: 29.46

GC content: 65.49

Gene sequence:

>2550_bases
GTGAACCTCTCGCTATCCTCTGCGCGCGACGCGCTCCTCGCTGGCCTGTTCGGCGATGCGAAGAAAGCCGACCATGCGCA
GCCGCGTTTCGCGCTCGACATGCTGTCGGACTGGCTTCCGTACCGCATCTATGACGAGGGCCCGGGGCTCTACCGGAACG
CGCACTCGAAGGGCTTCATTCTCGAAGTCACCCCGCTCATCGGCGCCGATGAGCGCACCGGTGAAATCCTCGGGCAGTTC
TTCTCCGAGAGCCTGCCGCAAGGCGCCTGTTTGCAGGTGCTGAACTTCGCGTCTCCGCGCATCGGCGCCATCGTCGGCCC
CTGGTTCGCGCCGCGCTACGAGCAGGGCGGGATCTACGAAGCGATCGCGAAGGCCCGCACCAACCGGCTCTACGATCTCG
TCTGGAAGTCGGGCTCGGCACACGCGCCGTTTCATGCGCGCCATGTGCGTCTCGTGCTGTCGCTGGGCGTTCCGGTGCCC
GGAAACGTGACCGATGCAGAACTCACCGAATGCCGCGACGGGATGGCGGGGATGCTGAACTCGCTCGGCCTTGCATCGAA
CAGGCTCGAGCCCGCAGGCCTGCTCGCACTGGTCGACGAACTCACCTCGCCGACGACAGCGCGCGAACCCGATCTCACCC
ACTGGAACCGCGAGGACACGCTCGACGCGCAGGCCATCCGCCGCGATATCGAACTCGAGGTCGAGGACGACCGGCTTATC
TTGCGCACCGAGCGCTTCCGCGAGACCGGGCGCTCGCGAGATGGCGTGCCTCAGGTAGGTGAATGCTATCCCGACCGCTT
CGATGTGCGCCATTACGGCGTGCGCTCTACCCCTGAGCGCTGGGCACCGTGGGAATGCGCGCGGCTCATCGGCGACATGT
TTACTGACAAGCTGCGCTTTCCCTGTCCCGCCGCGACAATGCTGTGCCTGCACTATCCCGACCAGGAGGCCGCCTCGGCG
CGCGCCGGCTACAAGTTCATGCGCACCACCAGCCTTTCGGAAACGAAGAGCGCGCGCTTCCTCCCTAGGCTTGGCGAGCA
ATCGGCCGAATGGAGACACGTCCAGGCCGAACTCCAGGCGGGCAAGAAGCTCGTCAAGCTGTTCTATGGTCTCACCACGA
TCTCGCCGCTCGGCGAAGGCGATGCGCATGAGCGCACGGTCAAGGCGATCTACAAGGCGGCCGGATGGGACCTTGCCGAC
GAGCGCTTCCTCCAGCTCCAGGGCCTCGTCGCCTCGTTCCCGTTGAGCCTCGCCGATGGTCTGGTCCACGACCTTGCGCG
GCTCAAACGCTTCCGGACCATGCTCTCGACCACCGCGGCCAATATCGCCCCCCTGCAGGGCGAGTATCTCGGCGGGACGA
TCCCGCACCTGCTGCTCCTCGGACGGCGCGGCCAGCCCTTCTTCTGGTCGCCCTTCGAGAACGCGGCGGGCAACCACAAC
ATCGCGATCTGCGGAAAGTCGGGCTCGGGCAAGTCGGTGCTGCTGCAGGAGCTGTGCGCCGCGCTGCGCGGCGCGGGCGC
CAAGGTCGTGGTGATCGACGACGGACGCAGTTTTGAGCATTCGGTCAAGTTACAGGGCGGCCGCTTCGTCGAGTTCACGC
TCGCCTCGGGATTCTCGCTCAACCCCTTCTCGATGGTCGACGATGCGCGCGCGCATGAAGACGAGGATTACCGGCTCGAC
TGCTTCGCCATGATCAAGGCCATCGTTGGCCAGATGGCGCGGCCAAGCGCCGCGCCTTCGGACACGGAGCGCGGGCTGAT
CGACCGCGCGGTGACGCAGGTGTGGGAAGCGCTCGGCAGCGGCGGGGCGATCGACGACGTCGCGCATGCGCTCCATCAGA
GCGAGAACGAGGCGGGCAAGGATCTCGCCACAGCGATCGCGCCCTTCTGCCGCGGTGGCAGCTATGCCGGGTTCTTCTCG
GGGAAAGCGAGTTTCGCGCTCGAAGACGATTTCACCGTCTTCGAGATGAGCGACCTCGCGTCCCGCGAGGAGCTTCGAAG
CGTTGTCCTCTCGGCAATCATGTTCATGACCGGTCAGGCGATGACGCGCTCGTCGCGCTCGACCAAGAAGCTGCTGCTGA
TCGACGAGGCCTGGGCGATGCTCAAGGGCGGTTCGATGGGCGAGTTCGTCGAGACCTATGCCCGCACCGCGCGCAAATAT
GGCGGCGCGCTTGCGACCGCGACCCAGTCCTTGAACGACTACTACAAGTCCGATGGTGCGCGCGCCGCGCTCGAAAACAG
CGACTGGATGCTGGTGCTCCAACAGAAGCCCGAGACCATCGCCGATTTCCGCAAGGAGGCCCGGCTCGACATGGACGACC
GGACCGAGACGCTGATCCGCAGCCTCAAGCGCTCGGGCACCGAGTACAGCGAGATCTACCTCAAAGGTCCCGAGATGGAA
GCCGTTGGACGCCTGGTGCTCGACCCACTCTCGGCAACCATCTTCTCCTCCGATCCTGACACCTATGCCGCGATCCGCCG
CCATGTCGAAAACGGCATGCCGCTCGAGCGCGCAGTCGCGCTGGTCGCAGGTGTGGAAGGAGGCGCATGA

Upstream 100 bases:

>100_bases
CGGAGCTGCCCGGTGCCAAAGCGCCGGACCCCGGGGCACCTGGTCGTTCCCCCTCCCCCGGCCAGGTGCCCCACCCTGTT
CTGCCCGAAGGAGAGCCCAA

Downstream 100 bases:

>100_bases
TGGTGCTCGAGACCACCACGCTCATAGATCGCGTGCCGCTTCCGTCAGTCAGACAAGCCCGCGACAAGCACCGTGTGATC
GACTGGCTGGCGCTGTCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 849; Mature: 849

Protein sequence:

>849_residues
MNLSLSSARDALLAGLFGDAKKADHAQPRFALDMLSDWLPYRIYDEGPGLYRNAHSKGFILEVTPLIGADERTGEILGQF
FSESLPQGACLQVLNFASPRIGAIVGPWFAPRYEQGGIYEAIAKARTNRLYDLVWKSGSAHAPFHARHVRLVLSLGVPVP
GNVTDAELTECRDGMAGMLNSLGLASNRLEPAGLLALVDELTSPTTAREPDLTHWNREDTLDAQAIRRDIELEVEDDRLI
LRTERFRETGRSRDGVPQVGECYPDRFDVRHYGVRSTPERWAPWECARLIGDMFTDKLRFPCPAATMLCLHYPDQEAASA
RAGYKFMRTTSLSETKSARFLPRLGEQSAEWRHVQAELQAGKKLVKLFYGLTTISPLGEGDAHERTVKAIYKAAGWDLAD
ERFLQLQGLVASFPLSLADGLVHDLARLKRFRTMLSTTAANIAPLQGEYLGGTIPHLLLLGRRGQPFFWSPFENAAGNHN
IAICGKSGSGKSVLLQELCAALRGAGAKVVVIDDGRSFEHSVKLQGGRFVEFTLASGFSLNPFSMVDDARAHEDEDYRLD
CFAMIKAIVGQMARPSAAPSDTERGLIDRAVTQVWEALGSGGAIDDVAHALHQSENEAGKDLATAIAPFCRGGSYAGFFS
GKASFALEDDFTVFEMSDLASREELRSVVLSAIMFMTGQAMTRSSRSTKKLLLIDEAWAMLKGGSMGEFVETYARTARKY
GGALATATQSLNDYYKSDGARAALENSDWMLVLQQKPETIADFRKEARLDMDDRTETLIRSLKRSGTEYSEIYLKGPEME
AVGRLVLDPLSATIFSSDPDTYAAIRRHVENGMPLERAVALVAGVEGGA

Sequences:

>Translated_849_residues
MNLSLSSARDALLAGLFGDAKKADHAQPRFALDMLSDWLPYRIYDEGPGLYRNAHSKGFILEVTPLIGADERTGEILGQF
FSESLPQGACLQVLNFASPRIGAIVGPWFAPRYEQGGIYEAIAKARTNRLYDLVWKSGSAHAPFHARHVRLVLSLGVPVP
GNVTDAELTECRDGMAGMLNSLGLASNRLEPAGLLALVDELTSPTTAREPDLTHWNREDTLDAQAIRRDIELEVEDDRLI
LRTERFRETGRSRDGVPQVGECYPDRFDVRHYGVRSTPERWAPWECARLIGDMFTDKLRFPCPAATMLCLHYPDQEAASA
RAGYKFMRTTSLSETKSARFLPRLGEQSAEWRHVQAELQAGKKLVKLFYGLTTISPLGEGDAHERTVKAIYKAAGWDLAD
ERFLQLQGLVASFPLSLADGLVHDLARLKRFRTMLSTTAANIAPLQGEYLGGTIPHLLLLGRRGQPFFWSPFENAAGNHN
IAICGKSGSGKSVLLQELCAALRGAGAKVVVIDDGRSFEHSVKLQGGRFVEFTLASGFSLNPFSMVDDARAHEDEDYRLD
CFAMIKAIVGQMARPSAAPSDTERGLIDRAVTQVWEALGSGGAIDDVAHALHQSENEAGKDLATAIAPFCRGGSYAGFFS
GKASFALEDDFTVFEMSDLASREELRSVVLSAIMFMTGQAMTRSSRSTKKLLLIDEAWAMLKGGSMGEFVETYARTARKY
GGALATATQSLNDYYKSDGARAALENSDWMLVLQQKPETIADFRKEARLDMDDRTETLIRSLKRSGTEYSEIYLKGPEME
AVGRLVLDPLSATIFSSDPDTYAAIRRHVENGMPLERAVALVAGVEGGA
>Mature_849_residues
MNLSLSSARDALLAGLFGDAKKADHAQPRFALDMLSDWLPYRIYDEGPGLYRNAHSKGFILEVTPLIGADERTGEILGQF
FSESLPQGACLQVLNFASPRIGAIVGPWFAPRYEQGGIYEAIAKARTNRLYDLVWKSGSAHAPFHARHVRLVLSLGVPVP
GNVTDAELTECRDGMAGMLNSLGLASNRLEPAGLLALVDELTSPTTAREPDLTHWNREDTLDAQAIRRDIELEVEDDRLI
LRTERFRETGRSRDGVPQVGECYPDRFDVRHYGVRSTPERWAPWECARLIGDMFTDKLRFPCPAATMLCLHYPDQEAASA
RAGYKFMRTTSLSETKSARFLPRLGEQSAEWRHVQAELQAGKKLVKLFYGLTTISPLGEGDAHERTVKAIYKAAGWDLAD
ERFLQLQGLVASFPLSLADGLVHDLARLKRFRTMLSTTAANIAPLQGEYLGGTIPHLLLLGRRGQPFFWSPFENAAGNHN
IAICGKSGSGKSVLLQELCAALRGAGAKVVVIDDGRSFEHSVKLQGGRFVEFTLASGFSLNPFSMVDDARAHEDEDYRLD
CFAMIKAIVGQMARPSAAPSDTERGLIDRAVTQVWEALGSGGAIDDVAHALHQSENEAGKDLATAIAPFCRGGSYAGFFS
GKASFALEDDFTVFEMSDLASREELRSVVLSAIMFMTGQAMTRSSRSTKKLLLIDEAWAMLKGGSMGEFVETYARTARKY
GGALATATQSLNDYYKSDGARAALENSDWMLVLQQKPETIADFRKEARLDMDDRTETLIRSLKRSGTEYSEIYLKGPEME
AVGRLVLDPLSATIFSSDPDTYAAIRRHVENGMPLERAVALVAGVEGGA

Specific function: Required for the assembly of mature F-pilin subunits into extended F pili [H]

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002789
- InterPro:   IPR014117 [H]

Pfam domain/function: PF01935 DUF87 [H]

EC number: NA

Molecular weight: Translated: 93215; Mature: 93215

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSLSSARDALLAGLFGDAKKADHAQPRFALDMLSDWLPYRIYDEGPGLYRNAHSKGFI
CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEE
LEVTPLIGADERTGEILGQFFSESLPQGACLQVLNFASPRIGAIVGPWFAPRYEQGGIYE
EEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEECCCCCCCCCCCCHHH
AIAKARTNRLYDLVWKSGSAHAPFHARHVRLVLSLGVPVPGNVTDAELTECRDGMAGMLN
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEHEEECCCCCCCCCHHHHHHHHHHHHHHHH
SLGLASNRLEPAGLLALVDELTSPTTAREPDLTHWNREDTLDAQAIRRDIELEVEDDRLI
HCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEECCCEEE
LRTERFRETGRSRDGVPQVGECYPDRFDVRHYGVRSTPERWAPWECARLIGDMFTDKLRF
EEHHHHHHCCCCCCCCCCHHHCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PCPAATMLCLHYPDQEAASARAGYKFMRTTSLSETKSARFLPRLGEQSAEWRHVQAELQA
CCCHHHEEEEECCCHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GKKLVKLFYGLTTISPLGEGDAHERTVKAIYKAAGWDLADERFLQLQGLVASFPLSLADG
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHH
LVHDLARLKRFRTMLSTTAANIAPLQGEYLGGTIPHLLLLGRRGQPFFWSPFENAAGNHN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCEECCHHCCCCCCC
IAICGKSGSGKSVLLQELCAALRGAGAKVVVIDDGRSFEHSVKLQGGRFVEFTLASGFSL
EEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCEEEEEEECCCCCC
NPFSMVDDARAHEDEDYRLDCFAMIKAIVGQMARPSAAPSDTERGLIDRAVTQVWEALGS
CCHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC
GGAIDDVAHALHQSENEAGKDLATAIAPFCRGGSYAGFFSGKASFALEDDFTVFEMSDLA
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCEEECCCCEEEEHHHHH
SREELRSVVLSAIMFMTGQAMTRSSRSTKKLLLIDEAWAMLKGGSMGEFVETYARTARKY
HHHHHHHHHHHHHHHHHCHHHHHCCCCCCEEEEEEHHHHHHCCCCHHHHHHHHHHHHHHH
GGALATATQSLNDYYKSDGARAALENSDWMLVLQQKPETIADFRKEARLDMDDRTETLIR
CCHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHH
SLKRSGTEYSEIYLKGPEMEAVGRLVLDPLSATIFSSDPDTYAAIRRHVENGMPLERAVA
HHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCHHHHHH
LVAGVEGGA
HHHCCCCCC
>Mature Secondary Structure
MNLSLSSARDALLAGLFGDAKKADHAQPRFALDMLSDWLPYRIYDEGPGLYRNAHSKGFI
CCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEE
LEVTPLIGADERTGEILGQFFSESLPQGACLQVLNFASPRIGAIVGPWFAPRYEQGGIYE
EEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEECCCCCCCCCCCCHHH
AIAKARTNRLYDLVWKSGSAHAPFHARHVRLVLSLGVPVPGNVTDAELTECRDGMAGMLN
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHEEHEEECCCCCCCCCHHHHHHHHHHHHHHHH
SLGLASNRLEPAGLLALVDELTSPTTAREPDLTHWNREDTLDAQAIRRDIELEVEDDRLI
HCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEECCCEEE
LRTERFRETGRSRDGVPQVGECYPDRFDVRHYGVRSTPERWAPWECARLIGDMFTDKLRF
EEHHHHHHCCCCCCCCCCHHHCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PCPAATMLCLHYPDQEAASARAGYKFMRTTSLSETKSARFLPRLGEQSAEWRHVQAELQA
CCCHHHEEEEECCCHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GKKLVKLFYGLTTISPLGEGDAHERTVKAIYKAAGWDLADERFLQLQGLVASFPLSLADG
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHH
LVHDLARLKRFRTMLSTTAANIAPLQGEYLGGTIPHLLLLGRRGQPFFWSPFENAAGNHN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCEECCHHCCCCCCC
IAICGKSGSGKSVLLQELCAALRGAGAKVVVIDDGRSFEHSVKLQGGRFVEFTLASGFSL
EEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCEEEEEEECCCCCC
NPFSMVDDARAHEDEDYRLDCFAMIKAIVGQMARPSAAPSDTERGLIDRAVTQVWEALGS
CCHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC
GGAIDDVAHALHQSENEAGKDLATAIAPFCRGGSYAGFFSGKASFALEDDFTVFEMSDLA
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCEEECCCCEEEEHHHHH
SREELRSVVLSAIMFMTGQAMTRSSRSTKKLLLIDEAWAMLKGGSMGEFVETYARTARKY
HHHHHHHHHHHHHHHHHCHHHHHCCCCCCEEEEEEHHHHHHCCCCHHHHHHHHHHHHHHH
GGALATATQSLNDYYKSDGARAALENSDWMLVLQQKPETIADFRKEARLDMDDRTETLIR
CCHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHH
SLKRSGTEYSEIYLKGPEMEAVGRLVLDPLSATIFSSDPDTYAAIRRHVENGMPLERAVA
HHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCHHHHHH
LVAGVEGGA
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2265751; 7915817; 1355084 [H]