Click here to switch to the map view.

The map label for this gene is 85373691

Identifier: 85373691

GI number: 85373691

Start: 895553

End: 896059

Strand: Reverse

Name: 85373691

Synonym: ELI_04320

Alternate gene names: NA

Gene position: 896059-895553 (Counterclockwise)

Preceding gene: 85373692

Following gene: 85373690

Centisome position: 29.36

GC content: 65.09

Gene sequence:

>507_bases
ATGAGCCTGCCCCGCTCGATCCGCCGTTCGCTGCTGCTCTCGGGGCTGGTCCTGCTGCCGCTCGCATGGGCGCCGCTCGA
TGCCTTCAGCAAGGACCACGCTTTCCTCATCAATGCGAGCCCGAGCCTGCCAAACTGGGCGTTCTGGCTCGACAAGCGCG
CGCCGATCGAACGCGGCAGCCTGATCTTCTTTGAGCCGCCGCAAAGCGAACTCGTCGAAAGGCATTTCGGAAAGGAACCG
CAGATGTTCGGCAAGCACGTGCTTGGCATGCCGGGCGATGTCGTGCGCCACGAGGGCGATGCGGTCTTCATCGACGGAAA
GCAGGTCGCGAGCCTGCTCGAGGTCACCCGCCTTGGCGTGCCGCTCACGCGCGGTCCCGAAGGCGCAATACCGGAAGGTT
GCTACTACACCGGAACCGACCATCCACGCGGGCTAGACAGCCGCTACGGGGAAATCGGCTTCGTCTGCCGCGGGCAGATC
CTCGGCAGCGGGAGGGCAATCCTGTGA

Upstream 100 bases:

>100_bases
TGGTGCTGGTTGCCGAGGCCGTGCTCGCGGGCGCTGCCGAAGACGCAACCTCCGAACTCGAGCAGCGCATCGCGGACAAG
CTCGCAGGGGAGATCCAGCC

Downstream 100 bases:

>100_bases
TGCGCTCTTTCCTTCCGATTGGCGCGCTTCTCCTCGCCATGCTCCCTGCCAGCCTGCAGGCACGAGACTACGGCCAGCGC
GGCGCGGTCTTCCCTGTGAT

Product: putative F pilus assembly protein traF

Products: NA

Alternate protein names: Conjugal Transfer Protein; Type IV Secretory Pathway Protease TraF-Like; Peptidase; Type IV Secretory Pathway Protease TraF-Like Protein

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MSLPRSIRRSLLLSGLVLLPLAWAPLDAFSKDHAFLINASPSLPNWAFWLDKRAPIERGSLIFFEPPQSELVERHFGKEP
QMFGKHVLGMPGDVVRHEGDAVFIDGKQVASLLEVTRLGVPLTRGPEGAIPEGCYYTGTDHPRGLDSRYGEIGFVCRGQI
LGSGRAIL

Sequences:

>Translated_168_residues
MSLPRSIRRSLLLSGLVLLPLAWAPLDAFSKDHAFLINASPSLPNWAFWLDKRAPIERGSLIFFEPPQSELVERHFGKEP
QMFGKHVLGMPGDVVRHEGDAVFIDGKQVASLLEVTRLGVPLTRGPEGAIPEGCYYTGTDHPRGLDSRYGEIGFVCRGQI
LGSGRAIL
>Mature_167_residues
SLPRSIRRSLLLSGLVLLPLAWAPLDAFSKDHAFLINASPSLPNWAFWLDKRAPIERGSLIFFEPPQSELVERHFGKEPQ
MFGKHVLGMPGDVVRHEGDAVFIDGKQVASLLEVTRLGVPLTRGPEGAIPEGCYYTGTDHPRGLDSRYGEIGFVCRGQIL
GSGRAIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18475; Mature: 18343

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPRSIRRSLLLSGLVLLPLAWAPLDAFSKDHAFLINASPSLPNWAFWLDKRAPIERGS
CCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCCCEEEEECCCCCCCCCC
LIFFEPPQSELVERHFGKEPQMFGKHVLGMPGDVVRHEGDAVFIDGKQVASLLEVTRLGV
EEEECCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHEECCCEEEECHHHHHHHHHHHHHCC
PLTRGPEGAIPEGCYYTGTDHPRGLDSRYGEIGFVCRGQILGSGRAIL
CCCCCCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEECEEECCCCCCC
>Mature Secondary Structure 
SLPRSIRRSLLLSGLVLLPLAWAPLDAFSKDHAFLINASPSLPNWAFWLDKRAPIERGS
CCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCCCEEEEECCCCCCCCCC
LIFFEPPQSELVERHFGKEPQMFGKHVLGMPGDVVRHEGDAVFIDGKQVASLLEVTRLGV
EEEECCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHEECCCEEEECHHHHHHHHHHHHHCC
PLTRGPEGAIPEGCYYTGTDHPRGLDSRYGEIGFVCRGQILGSGRAIL
CCCCCCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEECEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA