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The map label for this gene is trbC [C]

Identifier: 85373688

GI number: 85373688

Start: 893159

End: 893914

Strand: Reverse

Name: trbC [C]

Synonym: ELI_04305

Alternate gene names: 85373688

Gene position: 893914-893159 (Counterclockwise)

Preceding gene: 85373689

Following gene: 85373687

Centisome position: 29.29

GC content: 66.27

Gene sequence:

>756_bases
ATGAGAAACGCTTTCCCCATACTCGTTGGCCTGAGCCTCGTGATCGCTGCCGGATTTGCCGCCGCTTCTGCGCAGGATGC
CGGACCCGACCTTGACCTCGCTGAGATCCGCGCGCGAGCGGCCGAACATGCCGTCGACGCCGAGGCGCTCGCCACGTCGG
TCAGGACAAAAGCGGATACCCTCGCAGAAGACGCGCGCGCCGCGCAGCAAACGGCTTTCGACAATCGCGCAGGCTATGCC
GAGACTGCGCAGGCGACCGCGAATGCCGGGCCGCTCGATCTCGATGGCATGATCCGCGCCCAGGCCGACGCGGAAGTGGC
AGCGATGGGCGACACGCCCCGGTTCATCGCTTTTGCCTCATTGGCAATGCCCGAGCCCTCATTGAAGGCGCTGGTTCGCG
ATGTCTCGAGGGCCGGCGGCGTCACCGTGCTGCGCGGTTTCCCGCAAGGCGACAGCGCGCGCTTCAAGAAGCGCATCGCC
GCAATCTGGAGCGATGGCGATGAGGCCGGCGCGCTCGGGATCGACCCGCGCCTGTTCCGCGCGTTCGATATCAAGGTTGC
CCCGAGCTTCGTGATGATCGCGAGCGATTTCAGCCCCTGCGACGGGTTCGACTGCAAAGACGTCTTGCCGCCGCACGACC
GCATTGCCGGCAATATCAGCGTGGCCGAAGTGCTCGACACCTTCGCTTCGGGAGGCGGTCCGGGAGCGCAGCTCGCGCGC
CTCCATTCCCGCAGGCTCGAAGGAGAACGGCCATGA

Upstream 100 bases:

>100_bases
TCGGTGCATCCACCACCTTCCAGTCCCCCGGACAGGTCATCCCCGCGATCGGCGAAGACATGGGATACCTCGTCTGGCGC
AAGAGGAATTGCTGCGCGCT

Downstream 100 bases:

>100_bases
GGCTCATACAATCGCTTCGCATAGGACTGCTCGGTCTTCTCGCCGTCGCCGCGCCCCTTTCCGCGCAGCAGCAGGACGCG
CGGGCCGATGGCAAGGCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MRNAFPILVGLSLVIAAGFAAASAQDAGPDLDLAEIRARAAEHAVDAEALATSVRTKADTLAEDARAAQQTAFDNRAGYA
ETAQATANAGPLDLDGMIRAQADAEVAAMGDTPRFIAFASLAMPEPSLKALVRDVSRAGGVTVLRGFPQGDSARFKKRIA
AIWSDGDEAGALGIDPRLFRAFDIKVAPSFVMIASDFSPCDGFDCKDVLPPHDRIAGNISVAEVLDTFASGGGPGAQLAR
LHSRRLEGERP

Sequences:

>Translated_251_residues
MRNAFPILVGLSLVIAAGFAAASAQDAGPDLDLAEIRARAAEHAVDAEALATSVRTKADTLAEDARAAQQTAFDNRAGYA
ETAQATANAGPLDLDGMIRAQADAEVAAMGDTPRFIAFASLAMPEPSLKALVRDVSRAGGVTVLRGFPQGDSARFKKRIA
AIWSDGDEAGALGIDPRLFRAFDIKVAPSFVMIASDFSPCDGFDCKDVLPPHDRIAGNISVAEVLDTFASGGGPGAQLAR
LHSRRLEGERP
>Mature_251_residues
MRNAFPILVGLSLVIAAGFAAASAQDAGPDLDLAEIRARAAEHAVDAEALATSVRTKADTLAEDARAAQQTAFDNRAGYA
ETAQATANAGPLDLDGMIRAQADAEVAAMGDTPRFIAFASLAMPEPSLKALVRDVSRAGGVTVLRGFPQGDSARFKKRIA
AIWSDGDEAGALGIDPRLFRAFDIKVAPSFVMIASDFSPCDGFDCKDVLPPHDRIAGNISVAEVLDTFASGGGPGAQLAR
LHSRRLEGERP

Specific function: Essential For F Plasmid Conjugative Transfer, Participates In F-Pilus Assembly. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26189; Mature: 26189

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNAFPILVGLSLVIAAGFAAASAQDAGPDLDLAEIRARAAEHAVDAEALATSVRTKADT
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAEDARAAQQTAFDNRAGYAETAQATANAGPLDLDGMIRAQADAEVAAMGDTPRFIAFAS
HHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCEEECCCCEEEECCCCCHHHHHHH
LAMPEPSLKALVRDVSRAGGVTVLRGFPQGDSARFKKRIAAIWSDGDEAGALGIDPRLFR
HCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
AFDIKVAPSFVMIASDFSPCDGFDCKDVLPPHDRIAGNISVAEVLDTFASGGGPGAQLAR
EEEEEECCCEEEEECCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCHHHHHH
LHSRRLEGERP
HHHHHCCCCCC
>Mature Secondary Structure
MRNAFPILVGLSLVIAAGFAAASAQDAGPDLDLAEIRARAAEHAVDAEALATSVRTKADT
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAEDARAAQQTAFDNRAGYAETAQATANAGPLDLDGMIRAQADAEVAAMGDTPRFIAFAS
HHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCEEECCCCEEEECCCCCHHHHHHH
LAMPEPSLKALVRDVSRAGGVTVLRGFPQGDSARFKKRIAAIWSDGDEAGALGIDPRLFR
HCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
AFDIKVAPSFVMIASDFSPCDGFDCKDVLPPHDRIAGNISVAEVLDTFASGGGPGAQLAR
EEEEEECCCEEEEECCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCHHHHHH
LHSRRLEGERP
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA