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The map label for this gene is ftsY [H]

Identifier: 85373608

GI number: 85373608

Start: 805459

End: 806373

Strand: Reverse

Name: ftsY [H]

Synonym: ELI_03905

Alternate gene names: 85373608

Gene position: 806373-805459 (Counterclockwise)

Preceding gene: 85373609

Following gene: 85373607

Centisome position: 26.42

GC content: 64.26

Gene sequence:

>915_bases
ATGAGCTGGACCGAGCGCCTGTTCGGCGGCTTCAAGAAGACGTCCGACCGGCTGAGCGAAAACCTCACCACCGCCGTCAG
TACCGCGACGCTCGACGATGCAACGCTGGAGGAGGTCGAAGACGCGCTGATCATGTCCGATCTCGGCCCGGCAGCCGCCT
CGCGCATCCGCGAGAAGCTGAAGGAAAAGCGTTTCGGCCTGCAGATCAGCGAGCGCGAGCTTAAAAAGGCAGTCGCCGAC
GAGATCGCGGAAATCCTCCGCCCGGTCGCGAAGCCGCTGGAAATCACCGCCTTTCCGCGCCCTCAGGTGATCCTCGTCAT
CGGCGTCAACGGCAGCGGCAAGACCACCACGATCGCCAAACTGGCGCACTGGCTGGTCGAAGAAGATTACGAGGTCATGC
TGGCGGCAGGCGACACGTTTCGCGCCGCCGCCATCGAACAGCTCGCGACCTGGGCCGACCGCGTCGGCGTGCCGATCGTC
AAGGGTCCGCAGGGCGGCGATCCGGCGAGCATCGTGTTCGACGGTGTGAAAGCCGGGACCGATCGTGGCACCGATGCGCT
GGTAGTCGACACCGCCGGGCGCCTGCAGAACAAGCGGGAGCTGATGGACGAATTGGCCAAGATCAGGAAGGTTCTTGGGC
GCCTCAATCCGGAAGCACCACACGACGTGATCCTGGTGCTCGATGCCACCAATGGCCAGAACGCATTGAGCCAGATCGAC
GTATTCAAGGAAGTCGCCGGCGTGACCGGCCTGATCATGACCAAGCTCGACGGCACCGCGCGCGGCGGTGTGCTGGTCGC
GGCGGCTGAGCAATATGGCTTGCCGATCCACGCCATCGGCGTGGGTGAGACGATCGACGACCTGCGACCGTTCGACCCGG
ACCTGGTCGCGAAAGTGATCGCGGGGATTGCGTAA

Upstream 100 bases:

>100_bases
GCTACACGCCTGCCTACGCACGGGTTAGACTGCCCGACCAGACACCAGTCGGGAGCACCGTGACCGTTACCCCCACACAT
TTCGAAAAAGGCCTGCTGTC

Downstream 100 bases:

>100_bases
GACATGACCGACCATAACCCCACCCCCGTTCGCCCTGAGCCTGTCGAAGGGCAGGCAGGAGCGCCTGCCCCTCGTACTTC
GACAGACTCAGCACGAACGG

Product: signal recognition particle GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MSWTERLFGGFKKTSDRLSENLTTAVSTATLDDATLEEVEDALIMSDLGPAAASRIREKLKEKRFGLQISERELKKAVAD
EIAEILRPVAKPLEITAFPRPQVILVIGVNGSGKTTTIAKLAHWLVEEDYEVMLAAGDTFRAAAIEQLATWADRVGVPIV
KGPQGGDPASIVFDGVKAGTDRGTDALVVDTAGRLQNKRELMDELAKIRKVLGRLNPEAPHDVILVLDATNGQNALSQID
VFKEVAGVTGLIMTKLDGTARGGVLVAAAEQYGLPIHAIGVGETIDDLRPFDPDLVAKVIAGIA

Sequences:

>Translated_304_residues
MSWTERLFGGFKKTSDRLSENLTTAVSTATLDDATLEEVEDALIMSDLGPAAASRIREKLKEKRFGLQISERELKKAVAD
EIAEILRPVAKPLEITAFPRPQVILVIGVNGSGKTTTIAKLAHWLVEEDYEVMLAAGDTFRAAAIEQLATWADRVGVPIV
KGPQGGDPASIVFDGVKAGTDRGTDALVVDTAGRLQNKRELMDELAKIRKVLGRLNPEAPHDVILVLDATNGQNALSQID
VFKEVAGVTGLIMTKLDGTARGGVLVAAAEQYGLPIHAIGVGETIDDLRPFDPDLVAKVIAGIA
>Mature_303_residues
SWTERLFGGFKKTSDRLSENLTTAVSTATLDDATLEEVEDALIMSDLGPAAASRIREKLKEKRFGLQISERELKKAVADE
IAEILRPVAKPLEITAFPRPQVILVIGVNGSGKTTTIAKLAHWLVEEDYEVMLAAGDTFRAAAIEQLATWADRVGVPIVK
GPQGGDPASIVFDGVKAGTDRGTDALVVDTAGRLQNKRELMDELAKIRKVLGRLNPEAPHDVILVLDATNGQNALSQIDV
FKEVAGVTGLIMTKLDGTARGGVLVAAAEQYGLPIHAIGVGETIDDLRPFDPDLVAKVIAGIA

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=265, Percent_Identity=32.8301886792453, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI226371618, Length=242, Percent_Identity=33.0578512396694, Blast_Score=129, Evalue=2e-30,
Organism=Homo sapiens, GI23308697, Length=299, Percent_Identity=28.7625418060201, Blast_Score=111, Evalue=8e-25,
Organism=Homo sapiens, GI295424842, Length=299, Percent_Identity=28.0936454849498, Blast_Score=111, Evalue=9e-25,
Organism=Homo sapiens, GI89061728, Length=125, Percent_Identity=35.2, Blast_Score=79, Evalue=5e-15,
Organism=Escherichia coli, GI1789874, Length=290, Percent_Identity=46.551724137931, Blast_Score=244, Evalue=6e-66,
Organism=Escherichia coli, GI1788963, Length=303, Percent_Identity=34.6534653465347, Blast_Score=154, Evalue=5e-39,
Organism=Caenorhabditis elegans, GI17539958, Length=287, Percent_Identity=31.0104529616725, Blast_Score=140, Evalue=8e-34,
Organism=Caenorhabditis elegans, GI193206261, Length=286, Percent_Identity=31.4685314685315, Blast_Score=122, Evalue=3e-28,
Organism=Saccharomyces cerevisiae, GI6325345, Length=305, Percent_Identity=32.1311475409836, Blast_Score=147, Evalue=2e-36,
Organism=Saccharomyces cerevisiae, GI6320498, Length=302, Percent_Identity=25.1655629139073, Blast_Score=96, Evalue=6e-21,
Organism=Drosophila melanogaster, GI17647949, Length=265, Percent_Identity=32.8301886792453, Blast_Score=139, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24641198, Length=296, Percent_Identity=29.3918918918919, Blast_Score=120, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 32480; Mature: 32348

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWTERLFGGFKKTSDRLSENLTTAVSTATLDDATLEEVEDALIMSDLGPAAASRIREKL
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KEKRFGLQISERELKKAVADEIAEILRPVAKPLEITAFPRPQVILVIGVNGSGKTTTIAK
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCHHHHHH
LAHWLVEEDYEVMLAAGDTFRAAAIEQLATWADRVGVPIVKGPQGGDPASIVFDGVKAGT
HHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHEEECCHHCCC
DRGTDALVVDTAGRLQNKRELMDELAKIRKVLGRLNPEAPHDVILVLDATNGQNALSQID
CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHH
VFKEVAGVTGLIMTKLDGTARGGVLVAAAEQYGLPIHAIGVGETIDDLRPFDPDLVAKVI
HHHHHHHHHHHHHEECCCCCCCCEEEEEHHHHCCCEEEEECCCCHHHCCCCCHHHHHHHH
AGIA
HCCC
>Mature Secondary Structure 
SWTERLFGGFKKTSDRLSENLTTAVSTATLDDATLEEVEDALIMSDLGPAAASRIREKL
CHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KEKRFGLQISERELKKAVADEIAEILRPVAKPLEITAFPRPQVILVIGVNGSGKTTTIAK
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCHHHHHH
LAHWLVEEDYEVMLAAGDTFRAAAIEQLATWADRVGVPIVKGPQGGDPASIVFDGVKAGT
HHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHEEECCHHCCC
DRGTDALVVDTAGRLQNKRELMDELAKIRKVLGRLNPEAPHDVILVLDATNGQNALSQID
CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHH
VFKEVAGVTGLIMTKLDGTARGGVLVAAAEQYGLPIHAIGVGETIDDLRPFDPDLVAKVI
HHHHHHHHHHHHHEECCCCCCCCEEEEEHHHHCCCEEEEECCCCHHHCCCCCHHHHHHHH
AGIA
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]