| Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
|---|---|
| Accession | NC_007722 |
| Length | 3,052,398 |
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The map label for this gene is ldh [H]
Identifier: 85373597
GI number: 85373597
Start: 796134
End: 797207
Strand: Direct
Name: ldh [H]
Synonym: ELI_03850
Alternate gene names: 85373597
Gene position: 796134-797207 (Clockwise)
Preceding gene: 85373593
Following gene: 85373598
Centisome position: 26.08
GC content: 65.83
Gene sequence:
>1074_bases ATGAACGCGATGACGGCATTCTGGACCGAAGCGGATTACGACGATCACGAGCTGGTCCAGCTCGTGCGCGATCCCAAATC GGGCCTGACCGCGATTATCGCGATCCATTCGACCCATCTCGGCCCGGGCGCCGGTGGCACGCGTTTCTGGCACTATCCCG ATCCCAAGGCAGCGATGCGCGACGCGCTGCGGCTCAGCCGCGGGATGAGCTACAAGAACGCGATGGCCGGCCTGCCGATG GGCGGCGGCAAGGCCGTGATCCTCGCCGACGAGGATCGCACCAAGTCGCCCGAGATGCTCGCCGCCTTCGGCGATGCGGT CGAAGCGCTGGGTGGCAAATACGTGACCGCTGAGGACGTCGGCATCAGCGAAGCCGACATGGTCGCCGTTTCGCAGCGCA CCAGCTATGTTTCGGGCCTGCCGGTCGAGGGCGAAGATTCGGCTGGCGGCGATCCCGGTCCGTTCACTGCCATGGGCATC TATCACGGCATCAAGGCCGCTGTGGCGCACAAGCTCGGCAAGGACAGCGTCAAGGGCGTCCATGTCGCGGTGCAGGGCAC CGGCAGCGTCGGCGGCGGCGTTGCGCGCCTGCTGGCCAAGGATGGTGCCAAGCTGACGCTCTCCGACATCCACGAAGACC GCGCCGAAGCGCTGGCGACCGAGCTTGGCGGCAAGGCCGTCGCGCCCGATGCGATCATGAGCACGGCCTGCGACGTTTTC AGCCCCAACGCTCTTGGCGCGATCCTCGATGACGAAGGCATTGCGCGGCTCGACTGCGCCATTGTCGCCGGCGGCGCCAA CAACCAGTTCGCCCGCGCCAAACATGGTGCCATGCTGGCCGAGCGCGATATCCTCTACGCCCCGGATTATGTCATCAATG CCGGCGGTATCATTAGCGTGGCGCAAGAATATCTCGACCGCCAGCAGGGCGCGTCCGGCGGCATCAACGAAGTCCGCAAG CGCATCGCCCAGATTCCCGAGCGGCTGGTGCAGATCTGGCAAGAGAGCGAACGCAGCGGCATTTCCGCGGACGTCGTTGC CGACCGCATGGCCCAGAAGCTCATCGGGCGGTGA
Upstream 100 bases:
>100_bases GGTTTGTGGTACCGGAGGTCGGGGGTTCGAGACCCCTCGATCGCCCCATTTTCCCCCTCGCAACAGCACACTCTTCCACC CCACAGCAAGGGCAGGGGCG
Downstream 100 bases:
>100_bases CGAATAGGCCTTCGGTCTCGCTTGCAGGGGCCTGCCCGCGCGACTAGATTGCAACGCGACACGTCTCATGCACGCTTTCG CCAATCCCAAACGCTTCCTG
Product: leucine dehydrogenase
Products: NA
Alternate protein names: LeuDH [H]
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MNAMTAFWTEADYDDHELVQLVRDPKSGLTAIIAIHSTHLGPGAGGTRFWHYPDPKAAMRDALRLSRGMSYKNAMAGLPM GGGKAVILADEDRTKSPEMLAAFGDAVEALGGKYVTAEDVGISEADMVAVSQRTSYVSGLPVEGEDSAGGDPGPFTAMGI YHGIKAAVAHKLGKDSVKGVHVAVQGTGSVGGGVARLLAKDGAKLTLSDIHEDRAEALATELGGKAVAPDAIMSTACDVF SPNALGAILDDEGIARLDCAIVAGGANNQFARAKHGAMLAERDILYAPDYVINAGGIISVAQEYLDRQQGASGGINEVRK RIAQIPERLVQIWQESERSGISADVVADRMAQKLIGR
Sequences:
>Translated_357_residues MNAMTAFWTEADYDDHELVQLVRDPKSGLTAIIAIHSTHLGPGAGGTRFWHYPDPKAAMRDALRLSRGMSYKNAMAGLPM GGGKAVILADEDRTKSPEMLAAFGDAVEALGGKYVTAEDVGISEADMVAVSQRTSYVSGLPVEGEDSAGGDPGPFTAMGI YHGIKAAVAHKLGKDSVKGVHVAVQGTGSVGGGVARLLAKDGAKLTLSDIHEDRAEALATELGGKAVAPDAIMSTACDVF SPNALGAILDDEGIARLDCAIVAGGANNQFARAKHGAMLAERDILYAPDYVINAGGIISVAQEYLDRQQGASGGINEVRK RIAQIPERLVQIWQESERSGISADVVADRMAQKLIGR >Mature_357_residues MNAMTAFWTEADYDDHELVQLVRDPKSGLTAIIAIHSTHLGPGAGGTRFWHYPDPKAAMRDALRLSRGMSYKNAMAGLPM GGGKAVILADEDRTKSPEMLAAFGDAVEALGGKYVTAEDVGISEADMVAVSQRTSYVSGLPVEGEDSAGGDPGPFTAMGI YHGIKAAVAHKLGKDSVKGVHVAVQGTGSVGGGVARLLAKDGAKLTLSDIHEDRAEALATELGGKAVAPDAIMSTACDVF SPNALGAILDDEGIARLDCAIVAGGANNQFARAKHGAMLAERDILYAPDYVINAGGIISVAQEYLDRQQGASGGINEVRK RIAQIPERLVQIWQESERSGISADVVADRMAQKLIGR
Specific function: Functions catabolically in the bacterial metabolism of branched-chain L-amino acids. Catalyzes the reversible deamination of these branched-chain L-amino acids to their oxo analogs [H]
COG id: COG0334
COG function: function code E; Glutamate dehydrogenase/leucine dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Glu/Leu/Phe/Val dehydrogenases family [H]
Homologues:
Organism=Drosophila melanogaster, GI45549226, Length=332, Percent_Identity=26.8072289156627, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI45553475, Length=332, Percent_Identity=26.8072289156627, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006095 - InterPro: IPR006096 - InterPro: IPR006097 - InterPro: IPR016211 - InterPro: IPR016040 [H]
Pfam domain/function: PF00208 ELFV_dehydrog; PF02812 ELFV_dehydrog_N [H]
EC number: =1.4.1.9 [H]
Molecular weight: Translated: 37350; Mature: 37350
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAMTAFWTEADYDDHELVQLVRDPKSGLTAIIAIHSTHLGPGAGGTRFWHYPDPKAAMR CCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCEECCCHHHHHH DALRLSRGMSYKNAMAGLPMGGGKAVILADEDRTKSPEMLAAFGDAVEALGGKYVTAEDV HHHHHHHCCCHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECCC GISEADMVAVSQRTSYVSGLPVEGEDSAGGDPGPFTAMGIYHGIKAAVAHKLGKDSVKGV CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE HVAVQGTGSVGGGVARLLAKDGAKLTLSDIHEDRAEALATELGGKAVAPDAIMSTACDVF EEEEEECCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC SPNALGAILDDEGIARLDCAIVAGGANNQFARAKHGAMLAERDILYAPDYVINAGGIISV CCCCCEEEECCCCCEEEEEEEEECCCCCCHHHHHHCCHHHCCCEEECCCEEECCCCHHHH AQEYLDRQQGASGGINEVRKRIAQIPERLVQIWQESERSGISADVVADRMAQKLIGR HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MNAMTAFWTEADYDDHELVQLVRDPKSGLTAIIAIHSTHLGPGAGGTRFWHYPDPKAAMR CCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCEECCCHHHHHH DALRLSRGMSYKNAMAGLPMGGGKAVILADEDRTKSPEMLAAFGDAVEALGGKYVTAEDV HHHHHHHCCCHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECCC GISEADMVAVSQRTSYVSGLPVEGEDSAGGDPGPFTAMGIYHGIKAAVAHKLGKDSVKGV CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE HVAVQGTGSVGGGVARLLAKDGAKLTLSDIHEDRAEALATELGGKAVAPDAIMSTACDVF EEEEEECCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC SPNALGAILDDEGIARLDCAIVAGGANNQFARAKHGAMLAERDILYAPDYVINAGGIISV CCCCCEEEECCCCCEEEEEEEEECCCCCCHHHHHHCCHHHCCCEEECCCEEECCCCHHHH AQEYLDRQQGASGGINEVRKRIAQIPERLVQIWQESERSGISADVVADRMAQKLIGR HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8020469 [H]